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Oryza sativa
cluster # 720 cluster # 720       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_720#0 length = 1488 sequences # 2  

consensusID : consensus_720#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1488
fasta sequence
                              [CACAACCATACACGAAGGTTACTGTCCAACCGCCGCTACTGCCACTTTTCGCGGGAAAAGCACCTCTACCTACAGTCTTCGCGTGTACTCTTATACGTCGTCCCCTCCACACGTTGAACGCCCGAGACGATGCATGCTGCCGACACAGTCAGTCGGCGCAATGCCCATGGAAATCGTCACCAGGCGGGACAAGGAGGGGCTGCGGTGCAATGGCGCCGACGGCGAGAAGCTCCCGCAGCTGCTCGACTCGCCGCTCCCCACGCCGCGCCGGTCGTGCGCTTCGGCGGACGCGGCCAGCGTGCGGTGCCGCCGCGAAGCCTCCCCGCTGCGCACGCAGGTGCCGTTTTCCTGGGAGAGCTCCCCTGGGGTGCCCAAGAGGAGCAGCGCGTGCATGCACATGGCGCAGGAGATCATGCCGCCGCCGAAGCCGCCGCCTGGGCGCTGGAAGCAGTGCCCCGGCAGCAACTGGTGCGGCTACGGCAACTCGACCGCCGCGAGCAGCGACGACGACGATGCGTCGTTCTCCGACGCCCTGGACAGGGTCTCCACGCCCGATCAGCGGGTCGGCTCGTTCGACCGGATCACGTCCAAGCGCTTCGAGGACATCTTCCTCGGCCGCGCCACGAGCTTCGTCAATGACCGGTCCTCCCGCCGTGCACCAGCGGAAGCCTCCCTCGCCACGCCGTCCTCGTCCTCGGGCAGAGGCCCGAAACACTGGCGGCGACGCACCACGCGCCGCGATCACGACGGGCAGCAGCCGACGGCCAGGCAAAGCAACGACCACCCCGTCCAGGTGCAGCTTTTGCCGCGCATCAACATCAACGGCCGCGACGAGCAGATGTCACCGAGAGCCTGCGGGCTCATGGTGTTCTTCCCCTGGAGCGCCAAGCCCGCCGTTTGCGGGTTCAGGAGCCCGCCGGCGCAGTACGCGCCGTCCCCTCTCGCCGGCGCCAGCAACCCTTCGTCCTCACAGAGCCGCAGGTTCGTCACCCTACGCGACGCAATGCAGGAGGAGAACAAGACCGGCAGCGGCGGCCGAGACTTGCCGCGGCCGCGTGGCGAGAAGAGGAGCCGCGAGGAATGGCAGGCCGCAAGCCGTGGATGGGGCGTGTCGTCGCTGCTCGACGCGAGCAAGAAGTACTGCACCGACGCACGGAAGGCTCTGAGCAAGCTGTCCATCGGGTTAGGAACGGACAGCGGCAGTGGCAGTGGCAGCCCGAGAGTTGGCAGCAGGGAGAGGAAGTGCGGCAAGCAGGACCCCTCGTCGACGATGCCGGCCATGGCCACCAAGCTGACGCAGCTCAGGACTAGCAGAAACTAAGGTCAGATCATTCAGATTGATCGGTAGTTGCAAGAACAACTGCGCGTGGAGCATGTATATCTATGCATTTATGTAGGACTGCTCTCATCTCCTGACAGCTAGAATAAATCAGATGTGCCTATAAACATGTTAATCATGGTGTTATGCCTATAAAGTAATTATGGTAT]

[-] EMBL AK109789             [CACAACCATACACGAAGGTTACTGTCCAACCGCCGCTACTGCCACTTTTCGCGGGAAAAGCACCTCTACCTACAGTCTTCGCGTGTACTCTTATACGTCGTCCCCTCCACACGTTGAACGCCCGAGACGATGCATGCTGCCGACACAGTCAGTCGGCGCAATGCCCATGGAAATCGTCACCAGGCGGGACAAGGAGGGGCTGCGGTGCAATGGCGCCGACGGCGAGAAGCTCCCGCAGCTGCTCGACTCGCCGCTCCCCACGCCGCGCCGGTCGTGCGCTTCGGCGGACGCGGCCAGCGTGCGGTGCCGCCGCGAAGCCTCCCCGCTGCGCACGCAGGTGCCGTTTTCCTGGGAGAGCTCCCCTGGGGTGCCCAAGAGGAGCAGCGCGTGCATGCACATGGCGCAGGAGATCATGCCGCCGCCGAAGCCGCCGCCTGGGCGCTGGAAGCAGTGCCCCGGCAGCAACTGGTGCGGCTACGGCAACTCGACCGCCGCGAGCAGCGACGACGACGATGCGTCGTTCTCCGACGCCCTGGACAGGGTCTCCACGCCCGATCAGCGGGTCGGCTCGTTCGACCGGATCACGTCCAAGCGCTTCGAGGACATCTTCCTCGGCCGCGCCACGAGCTTCGTCAATGACCGGTCCTCCCGCCGTGCACCAGCGGAAGCCTCCCTCGCCACGCCGTCCTCGTCCTCGGGCAGAGGCCCGAAACACTGGCGGCGACGCACCACGCGCCGCGATCACGACGGGCAGCAGCCGACGGCCAGGCAAAGCAACGACCACCCCGTCCAGGTGCAGCTTTTGCCGCGCATCAACATCAACGGCCGCGACGAGCAGATGTCACCGAGAGCCTGCGGGCTCATGGTGTTCTTCCCCTGGAGCGCCAAGCCCGCCGTTTGCGGGTTCAGGAGCCCGCCGGCGCAGTACGCGCCGTCCCCTCTCGCCGGCGCCAGCAACCCTTCGTCCTCACAGAGCCGCAGGTTCGTCACCCTACGCGACGCAATGCAGGAGGAGAACAAGACCGGCAGCGGCGGCCGAGACTTGCCGCGGCCGCGTGGCGAGAAGAGGAGCCGCGAGGAATGGCAGGCCGCAAGCCGTGGATGGGGCGTGTCGTCGCTGCTCGACGCGAGCAAGAAGTACTGCACCGACGCACGGAAGGCTCTGAGCAAGCTGTCCATCGGGTTAGGAACGGACAGCGGCAGTGGCAGTGGCAGCCCGAGAGTTGGCAGCAGGGAGAGGAAGTGCGGCAAGCAGGACCCCTCGTCGACGATGCCGGCCATGGCCACCAAGCTGACGCAGCTCAGGACTAGCAGAAACTAAGGTCAGATCATTCAGATTGA                                                                                                                                                   ]
[+] EMBL AK060725             [                                                                                                                                    CATGCTGCCGACACAGTCAGTCGGCGCAATGCCCATGGAAATCGTCACCAGGCGGGACAAGGAGGGGCTGCGGTGCAATGGCGCCGACGGCGAGAAGCTCCCGCAGCTGCTCGACTCGCCGCTCCCCACGCCGCGCCGGTCGTGCGCTTCGGCGGACGCGGCCAGCGTGCGGTGCCGCCGCGAAGCCTCCCCGCTGCGCACGCAGGTGCCGTTTTCCTGGGAGAGCTCCCCTGGGGTGCCCAAGAGGAGCAGCGCGTGCATGCACATGGCGCAGGAGATCATGCCGCCGCCGAAGCCGCCGCCTGGGCGCTGGAAGCAGTGCCCCGGCAGCAACTGGTGCGGCTACGGCAACTCGACCGCCGCGAGCAGCGACGACGACGATGCGTCGTTCTCCGACGCCCTGGACAGGGTCTCCACGCCCGATCAGCGGGTCGGCTCGTTCGACCGGATCACGTCCAAGCGCTTCGAGGACATCTTCCTCGGCCGCGCCACGAGCTTCGTCAATGACCGGTCCTCCCGCCGTGCACCAGCGGAAGCCTCCCTCGCCACGCCGTCCTCGTCCTCGGGCAGAGGCCCGAAACACTGGCGGCGACGCACCACGCGCCGCGATCACGACGGGCAGCAGCCGACGGCCAGGCAAAGCAACGACCACCCCGTCCAGGTGCAGCTTTTGCCGCGCATCAACATCAACGGCCGCGACGAGCAGATGTCACCGAGAGCCTGCGGGCTCATGGTGTTCTTCCCCTGGAGCGCCAAGCCCGCCGTTTGCGGGTTCAGGAGCCCGCCGGCGCAGTACGCGCCGTCCCCTCTCGCCGGCGCCAGCAACCCTTCGTCCTCACAGAGCCGCAGGTTCGTCACCCTACGCGACGCAATGCAGGAGGAGAACAAGACCGGCAGCGGCGGCCGAGACTTGCCGCGGCCGCGTGGCGAGAAGAGGAGCCGCGAGGAATGGCAGGCCGCAAGCCGTGGATGGGGCGTGTCGTCGCTGCTCGACGCGAGCAAGAAGTACTGCACCGACGCACGGAAGGCTCTGAGCAAGCTGTCCATCGGGTTAGGAACGGACAGCGGCAGTGGCAGTGGCAGCCCGAGAGTTGGCAGCAGGGAGAGGAAGTGCGGCAAGCAGGACCCCTCATCGACGATGCCGGCCATGGCCACCAAGCTGACGCAGCTCAGGACTAGCAGAAACTAAGGTCAGATCATTCAGATTGATCGGTAGTTGCAAGAACAACTGCGCGTGGAGCATGTATATCTATGCATTTATGTAGGACTGCTCTCATCTCCTGACAGCTAGAATAAATCAGATGTGCCTATAAACATGTTAATCATGGTGTTATGCCTATAAAGTAATTATGGTAT]


>consensus_720#0 CACAACCATACACGAAGGTTACTGTCCAACCGCCGCTACTGCCACTTTTCGCGGGAAAAG CACCTCTACCTACAGTCTTCGCGTGTACTCTTATACGTCGTCCCCTCCACACGTTGAACG CCCGAGACGATGCATGCTGCCGACACAGTCAGTCGGCGCAATGCCCATGGAAATCGTCAC CAGGCGGGACAAGGAGGGGCTGCGGTGCAATGGCGCCGACGGCGAGAAGCTCCCGCAGCT GCTCGACTCGCCGCTCCCCACGCCGCGCCGGTCGTGCGCTTCGGCGGACGCGGCCAGCGT GCGGTGCCGCCGCGAAGCCTCCCCGCTGCGCACGCAGGTGCCGTTTTCCTGGGAGAGCTC CCCTGGGGTGCCCAAGAGGAGCAGCGCGTGCATGCACATGGCGCAGGAGATCATGCCGCC GCCGAAGCCGCCGCCTGGGCGCTGGAAGCAGTGCCCCGGCAGCAACTGGTGCGGCTACGG CAACTCGACCGCCGCGAGCAGCGACGACGACGATGCGTCGTTCTCCGACGCCCTGGACAG GGTCTCCACGCCCGATCAGCGGGTCGGCTCGTTCGACCGGATCACGTCCAAGCGCTTCGA GGACATCTTCCTCGGCCGCGCCACGAGCTTCGTCAATGACCGGTCCTCCCGCCGTGCACC AGCGGAAGCCTCCCTCGCCACGCCGTCCTCGTCCTCGGGCAGAGGCCCGAAACACTGGCG GCGACGCACCACGCGCCGCGATCACGACGGGCAGCAGCCGACGGCCAGGCAAAGCAACGA CCACCCCGTCCAGGTGCAGCTTTTGCCGCGCATCAACATCAACGGCCGCGACGAGCAGAT GTCACCGAGAGCCTGCGGGCTCATGGTGTTCTTCCCCTGGAGCGCCAAGCCCGCCGTTTG CGGGTTCAGGAGCCCGCCGGCGCAGTACGCGCCGTCCCCTCTCGCCGGCGCCAGCAACCC TTCGTCCTCACAGAGCCGCAGGTTCGTCACCCTACGCGACGCAATGCAGGAGGAGAACAA GACCGGCAGCGGCGGCCGAGACTTGCCGCGGCCGCGTGGCGAGAAGAGGAGCCGCGAGGA ATGGCAGGCCGCAAGCCGTGGATGGGGCGTGTCGTCGCTGCTCGACGCGAGCAAGAAGTA CTGCACCGACGCACGGAAGGCTCTGAGCAAGCTGTCCATCGGGTTAGGAACGGACAGCGG CAGTGGCAGTGGCAGCCCGAGAGTTGGCAGCAGGGAGAGGAAGTGCGGCAAGCAGGACCC CTCGTCGACGATGCCGGCCATGGCCACCAAGCTGACGCAGCTCAGGACTAGCAGAAACTA AGGTCAGATCATTCAGATTGATCGGTAGTTGCAAGAACAACTGCGCGTGGAGCATGTATA TCTATGCATTTATGTAGGACTGCTCTCATCTCCTGACAGCTAGAATAAATCAGATGTGCC TATAAACATGTTAATCATGGTGTTATGCCTATAAAGTAATTATGGTAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)