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Oryza sativa
cluster # 7210 cluster # 7210       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7210#0 length = 1345 sequences # 4  

consensusID : consensus_7210#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1345
fasta sequence
                              [TCGTCGACGTCGAGGGGACGAGGAGCCCACCGGCGAGCGGTGGCGCCACGGGGGAGGAAGGCGGCGAGCTGGGCGTCGGCGAGAACTCGAGGAGACCGACGAGAGGCCAGTCCACCACCGCGCAGCCACACAGGCACGGGGAAGAGTGGCGCGCGCGGCCGCCGGAGAAGGCTATGGCGTGGATCTGGATGCTCATGGCGGCGGGGGCCGTGCTCCTGTGGGCGGTTTCTCTGGGGCGGGTGCTCTCCTCCTCCTCGCCGGCGTGTCTGCCTGCCAACTCCACCTTCCTCTCCCCTCCTCGCGGCGACAGGATGAGCCGGAATGTCCTCCTCGTTCTCGCCCACCCCGACGACGAATCCATGTTTTTTGCTCCGACTATTCTTTTCCTCAAGTCAAAAGGTCACAGCATTCATATCTTGTGCTTGTCTCAAGGCAATGCTGATGGCCTTGGAAATATCCGCAAAGAGGAACTCTACCTTGCCTGTGTCACTCTTAAGATTCCAGCTGAGCAAGTTAAAGTCTTGGACCACTCAGAACTGCAGGATGGATTTCATAAAAATTGGGATCATGGACTAATAGCAGAACTTACCCTGGCACAATCCCAGTTATGGAATATCGACACGATTGTTGCCTTCGATTCCCGAGGAGTATCAGGCCATCCAAATCATTGCGATGTTCATCATGGAATCTGCAAGCTTCTGCGTGACAACGGGCAAGGACACATTGAAGCATGGGAGCTTGTAAGCTTGAACATTTTTCGCAAGTACAGTGGTCCAGTTGACATTTGGCTATCTTCCACCCTCTCCTCAAGCTCAAAACAACCAACTTATACTCTTGTTAATAATAGCCCTTCCAGAAGCTTTGAGGCAATGGCTTCACACAAAAGCCAGTGGGTTTGGTTCAGGAGATTGTTTGTCCTATTCTCAAGCTACACATACATAAATGTGCTCCAAAAAATTTGAAGTTTGTTGTCGTGCCAAAGCAAGCACCTTCCGGCTCAGATTGTCAAATGCCTGTACATGCAGAGTGCCAGAGTGTAAGCGGGAAGCTTCTCTGAAGAAAGACAACAATGTTGACATTGGATCAGGAATTCGAAAGATACTGAAATGTGATGATGAAATGCAACAGTTTAGGAACCTTTGTGATTATATGCCCTTTATACTTGTGTTGTAGGCCATCGATTGTGTTCATAGAGTTAGATTGGACCTCTGTATCCTCAGCTAGTTTCT-CTTGCTTGAAGAGTTATTGCCGTTGTTGGACGATCAATCTATATTGCAGTGTTACACAAGGTAACTGATGAACTGATATTACTATGCTGTCGCTCAAGCTGTATTCAAGCCAGACA]

[+] EMBL AK072212             [TCGTCGACGTCGAGGGGACGAGGAGCCCACCGGCGAGCGGTGGCGCCACGGGGGAGGAAGGCGGCGAGCTGGGCGTCGGCGAGAACTCGAGGAGACCGACGAGAGGCCAGTCCACCACCGCGCAGCCACACAGGCACGGGGAAGAGTGGCGCGCGCGGCCGCCGGAGAAGGCTATGGCGTGGATCTGGATGCTCATGGCGGCGGGGGCCGTGCTCCTGTGGGCGGTTTCTCTGGGGCGGGTGCTCTCCTCCTCCTCGCCGGCGTGTCTGCCTGCCAACTCCACCTTCCTCTCCCCTCCTCGCGGCGACAGGATGAGCCGGAATGTCCTCCTCGTTCTCGCCCACCCCGACGACGAATCCATGTTTTTTGCTCCGACTATTCTTTTCCTCAAGTCAAAAGGTCACAGCATTCATATCTTGTGCTTGTCTCAAGGCAATGCTGATGGCCTTGGAAATATCCGCAAAGAGGAACTCTACCTTGCCTGTGTCACTCTTAAGATTCCAGCTGAGCAAGTTAAAGTCTTGGACCACTCAGAACTGCAGGATGGATTTCATAAAAATTGGGATCATGGACTAATAGCAGAACTTACCCTGGCACAATCCCAGTTATGGAATATCGACACGATTGTTGCCTTCGATTCCCGAGGAGTATCAGGCCATCCAAATCATTGCGATGTTCATCATGGAATCTGCAAGCTTCTGCGTGACAACGGGCAAGGACACATTGAAGCATGGGAGCTTGTAAGCTTGAACATTTTTCGCAAGTACAGTGGTCCAGTTGACATTTGGCTATCTTCCACCCTCTCCTCAAGCTCAAAACAACCAACTTATACTCTTGTTAATAATAGCCCTTCCAGAAGCTTTGAGGCAATGGCTTCACACAAAAGCCAGTGGGTTTGGTTCAGGAGATTGTTTGTCCTATTCTCAAGCTACACATACATAAATGTGCTCCAAAAAATTTGAAGTTTGTTGTCGTGCCAAAGCAAGCACCTTCCGGCTCAGATTGTCAAATGCCTGTACATGCAGAGTGCCAGAGTGTAAGCGGGAAGCTTCTCTGAAGAAAGACAACAATGTTGACATTGGATCAGGAATTCGAAAGATACTGAAATGTGATGATGAAATGCAACAGTTTAGGAACCTTTGTGATTATATGCCCTTTATACTTGTGTTGTAGGCCATCGATTGTGTTCATAGAGTTAGATTGGACCTCTGTATCCTCAGCTAGTTTCT CTTGCTTGAAGAGTTATTGCCGTTGTTGGACGATCAATCTATATTGCAGTGTTACACAAGGTAACTGATGAACTGATATTACTATGCTGTCGCTCAAGCTG               ]
[+] EMBL CB652710             [                        GCCCCTCAGAGAGCGGTGGCGCCACGGGGGAGGAAGGCGGCGAGCTGGGCGTCGGCGAGAACTCGAGGAGACCGACCAGAGGCCAGTCCACCACCGCGCAGCCACACAGGCACGGGGAAGAGTGGCGCGCGCGGCCGCCGGAGAAGGCTATGGCGTGGATCTGGATGCTCATGGCGGCGGGGGCCGTGCTCCTGTGGGCGGTTTCTCTGGGGCGGGTGCTCTCCTCCTCCTCGCCGGCGTGTCTGCCTGCCAACTCCACCTTCCTCTCCCCTCCTCGCGGCGACAGGATGAGCCGGAATGTCCTCCTCGTTCTCGCCCACCCCGACGACGAATCCATGTTTTTTGCTCCGACTATTCTTTTCCTCAAGTCAAAAGGTCACAGCATTCATATCTTGTGCTTGTCTCAAGGCAATGCTGATGGCCTTGGAAATATCCGCAAAGAGGAACTCTACCTTGCCTGTGTCACTCTTAAGATTCCAGCTGAGCAAGTTAAAGTCTTGGACCACTCAGAACTGCAGGATGGATTTCATAAAAATTGGGATCATGGACTAATAGCAGAACTTACCCTGGCACAATCCCAGTTATGGAATATCGACACGATTGTTGCCTTCGATTCCCGAGGAGTATCAGGCCATCCAAATCATTGCGATGTTCATCATGGAATCTGCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK099065             [                                       GTGGCGCCACGGGGGAGGAAGGCGGCGAGCTGGGCGTCGGCGAGAACTCGAGGAGACCGACGAGAGGCCAGTCCACCACCGCGCAGCCACACAGGCACGGGGAAGAGTGGCGCGCGCGGCCGCCGGAGAAGGCTATGGCGTGGATCTGGATGCTCATGGCGGCGGGGGCCGTGCTCCTGTGGGCGGTTTCTCTGGGGCGGGTGCTCTCCTCCTCCTCGCCGGCGTGTCTGCCTGCCAACTCCACCTTCCTCTCCCCTCCTCGCGGCGACAGGATGAGCCGGAATGTCCTCCTCGTTCTCGCCCACCCCGACGACGAATCCATGTTTTTTGCTCCGACTATTCTTTTCCTCAAGTCAAAAGGTCACAGCATTCATATCTTGTGCTTGTCTCAAGGCAATGCTGATGGCCTTGGAAATATCCGCAAAGAGGAACTCTACCTTGCCTGTGTCACTCTTAAGATTCCAGCTGAGCAAGTTAAAGTCTTGGACCACTCAGAACTGCAGGATGGATTTCATAAAAATTGGGATCATGGACTAATAGCAGAACTTACCCTGGCACAATCCCAGTTATGGAATATCGACACGATTGTTGCCTTCGATTCCCGAGGAGTATCAGGCCATCCAAATCATTGCGATGTTCATCATGGAATCTGCAAGCTTCTGCGTGACAACGGGCAAGGACACATTGAAGCATGGGAGCTTGTAAGCTTGAACATTTTTCGCAAGTACAGTGGTCCAGTTGACATTTGGCTATCTTCCACCCTCTCCTCAAGCTCAAAACAACCAACTTATACTCTTGTTAATAATAGCCCTTCCAGAAGCTTTGAGGCAATGGCTTCACACAAAAGCCAGTGGGTTTGGTTCAGGAGATTGTTTGTCCTATTCTCAAGCTACACATACATAAATGTGCTCCAAAAAATTTGAAGTTTGTTGTCGTGCCAAAGCAAGCACCTTCCGGCTCAGATTGTCAAATGCCTGTACATGCAGAGTGCCAGAGTGTAAGCGGGAAGCTTCTCTGAAGAAAGACAACAATGTTGACATTGGATCAGGAATTCGAAAGATACTGAAATGTGATGATGAAATGCAACAGTTTAGGAACCTTTGTGATTATATGCCCTTTATACTTGTGTTGTAGGCCATCGATTGTGTTCATAGAGTTAGATTGGACCTCTGTATCCTCAGCTAGTTTCT CTTGCTTGAAGAGTTATTGCCGTTGTTGGACGATCAATCTCTATTGCAGTGTTACACAAGGTAACTGATGAACTGATATTACTATGCTGTCGCTCAAGCTGTATTCAAGCCAGACA]
[-] EMBL CB652711             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAAATATCCGCAAAGAGGAACTCTACCTTGCCTGTGTCACTCTTAAGATTCCAGCTGAGCAAGTTAAAGTCTTGGACCACTCAGAACTGCAGGATGGATTTCATAAAAATTGGGATCATGGACTAATAGCAGAACTTACCCTGGCACAATCCCAGTTATGGAATATCGACACGATTGTTGCCTTCGATTCCCGAGGAGTATCAGGCCATCCAAATCATTGCGATGTTCATCATGGAATCTGCAAGCTTCTGCGTGACAACGGGCAAGGACACATTGAAGCATGGGAGCTTGTAAGCTTGAACATTTTTCGCAAGTACAGTGGTCCAGTTGACATTTGGCTATCTTCCACCCTCTCCTCAAGCTCAAAACAACCAACTTATACTCTTGTTAATAATAGCCCTTCCAGAAGCTTTGAGGCAATGGCTTCACACAAAAGCCAGTGGGTTTGGTTCAGGAGATTGTTTGTCCTATTCTCAAGCTACACATACATAAATGTGCTCCAAAAAATTTGAAGTTTGTTGTCGTGCCAAAGCAAGCACCTTCCGGCTCAGATTGTCAAATGCCTGTACATGCAGAGTGCCAGAGTGTAAGCGGGAAGCTTCTCTGAAGAAAGACAACAATGTTGACATTGGATCAGGAATTCGAAAGATACTGAAATGTGATGATGAAATGCAACAGTTTAGGAACCTTTGTGATTATATGCCCTTTATACTTGTGTTGTAGGCCATCGATTGTGTTCATAGAGTTAGATTGGACCTCTGTATCCTCAGCTAGTTTCTGGTTGCTTGAAGAGTTATTGCCGTTGTTGGACGAT                                                                                  ]


>consensus_7210#0 TCGTCGACGTCGAGGGGACGAGGAGCCCACCGGCGAGCGGTGGCGCCACGGGGGAGGAAG GCGGCGAGCTGGGCGTCGGCGAGAACTCGAGGAGACCGACGAGAGGCCAGTCCACCACCG CGCAGCCACACAGGCACGGGGAAGAGTGGCGCGCGCGGCCGCCGGAGAAGGCTATGGCGT GGATCTGGATGCTCATGGCGGCGGGGGCCGTGCTCCTGTGGGCGGTTTCTCTGGGGCGGG TGCTCTCCTCCTCCTCGCCGGCGTGTCTGCCTGCCAACTCCACCTTCCTCTCCCCTCCTC GCGGCGACAGGATGAGCCGGAATGTCCTCCTCGTTCTCGCCCACCCCGACGACGAATCCA TGTTTTTTGCTCCGACTATTCTTTTCCTCAAGTCAAAAGGTCACAGCATTCATATCTTGT GCTTGTCTCAAGGCAATGCTGATGGCCTTGGAAATATCCGCAAAGAGGAACTCTACCTTG CCTGTGTCACTCTTAAGATTCCAGCTGAGCAAGTTAAAGTCTTGGACCACTCAGAACTGC AGGATGGATTTCATAAAAATTGGGATCATGGACTAATAGCAGAACTTACCCTGGCACAAT CCCAGTTATGGAATATCGACACGATTGTTGCCTTCGATTCCCGAGGAGTATCAGGCCATC CAAATCATTGCGATGTTCATCATGGAATCTGCAAGCTTCTGCGTGACAACGGGCAAGGAC ACATTGAAGCATGGGAGCTTGTAAGCTTGAACATTTTTCGCAAGTACAGTGGTCCAGTTG ACATTTGGCTATCTTCCACCCTCTCCTCAAGCTCAAAACAACCAACTTATACTCTTGTTA ATAATAGCCCTTCCAGAAGCTTTGAGGCAATGGCTTCACACAAAAGCCAGTGGGTTTGGT TCAGGAGATTGTTTGTCCTATTCTCAAGCTACACATACATAAATGTGCTCCAAAAAATTT GAAGTTTGTTGTCGTGCCAAAGCAAGCACCTTCCGGCTCAGATTGTCAAATGCCTGTACA TGCAGAGTGCCAGAGTGTAAGCGGGAAGCTTCTCTGAAGAAAGACAACAATGTTGACATT GGATCAGGAATTCGAAAGATACTGAAATGTGATGATGAAATGCAACAGTTTAGGAACCTT TGTGATTATATGCCCTTTATACTTGTGTTGTAGGCCATCGATTGTGTTCATAGAGTTAGA TTGGACCTCTGTATCCTCAGCTAGTTTCTCTTGCTTGAAGAGTTATTGCCGTTGTTGGAC GATCAATCTATATTGCAGTGTTACACAAGGTAACTGATGAACTGATATTACTATGCTGTC GCTCAAGCTGTATTCAAGCCAGACA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)