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Oryza sativa
cluster # 7211 cluster # 7211       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7211#0 length = 1067 sequences # 4  

consensusID : consensus_7211#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1067
fasta sequence
                              [GGGCGGCCCTTGGACTTCGGCTGGGAAATCGCGGATTTAGCCGCCGCCCCCCTCCTCCCTCTCGTCTCTCCCTCTCCCGCCGCCTCCGCCTCCGCCTCCCGTCGCGCCGCCGCCTCCGTTTCCGCCTTCCGCTCGCGCCGCCGCCGCCGGTCCACCCTCCGCCCTCCGCCG-CCTCCGTTGCCAACCGCCACCGTCCTTGCCGCCGCCGTCGCCTCCGCCTCGCGTAGTCGTCACCGTCGCCGGCCACCCCCTTCATCAGCCCCAGACCACCGG-ATCCGCCCCATCCTCCCCATCCCTGTCCTGTGTCTTCCCAGTTGGGGGTTAGGGGTCGCCGCTTCCCCGACGGCCACGACATGGAGGTGGATTCGAGCGTGTGGGGGCAGCGTCGGGGCTGCGCGTCGAGGAGAAGTGTAGCAGCGGCGGCGGAACATGATGGGGGTGGCCGTCGCCGCCGCCCAGCCCGCCGTTGCCGAGGTCTACCTCCGCCTCC-GAAACCAAACCCCTTTGCCGAGGTCTACCTCCGCCTCCGCCCTCCGCTCCTTGCGCCTCTCTTGTTTAATTTGTCCACAATCTCCAGTACAATTCCTCTTCTGGATTTTGCATTGCC--TTTTTTTTTCTAGGGTCTTTCTCTCCTTAGGCCAATATTAGACTGATTCGGTGGTTTCTTCGGTTTTAGTAATCTAGGGTTTGACGGTGAATAGAGGTTCAAATTTGGGCGTTTTCCCAATCTATAATCTTTGAGTTATTCCAGGTCTGATAATCTAGAGTTTTGATGCCTTTTCTTACCAACGATTTCAATGGATCTCAAGGGGATAATACAGGGTTTGATCAGTTCATGGGAAATACCACCTCTGTTTCATCACAAAGTTATTTTGATGCATCGTGTTTCACTGATTCTGGCTTGACGTATGTGTGGATTCATTGTGCAGTACTACAATGCAAGAAGCACAGAAATAGTTGAGGCAGGGGAAGCTTTGGGAATGCACTGATATGCCACTAATTGCTTACACACCGAGGAGCTTCTCAGCATTTGCCCAATTTGGCTTGCCAAGACAGATGCTCGTAGC]

[+] EMBL CB673875             [GGGCGGCCCTTGGACTTCGGCTGGGAAATCGCGGATTTAGCCGCCGCCCCCCTCCTCCCTCTCGTCTCTCCCTCTCCCGCCGCCTCCGCCTCCGCCTCCCGTCGCGCCGCCGCCTCCGTTTCCGCCTTCCGCTCGCGCCGCCGCCGCCGGTCCACCCTCCGCCCTCCGCCG CCTCCGTTGCCAACCGCCACCGTCCTTGCCGCCGCCGTCGCCTCCGCCTCGCGTAGTCGTCACCGTCGCCGGCCACCCCCTTCATCAGCCCCAGACCACCGG ATCCGCCCCATCCTCCCCATCCCTGTCCTGTGTCTTCCCAGTTGGGGGTTAGGGGTCGCCGCTTCCCCGACGGCCACGACATGGAGGTGGATTCGAGCGTGTGGGGGCAGCGTCGGGGCTGCGCGTCGAGGAGAAGTGTAGCAGCGGCGGCGGAACATGATGGGGGTGGCCGTCGCCGCCGCCCAGCCCGCCGTTGCCGAGGTCTACCTCCGCCTCC GAAACCAAACCCCTTTGCCGAGGTCTACCTCCGCCTCCGCCCTCCGCTCCTTGCGCCTCTCTTGTTTAATTTGTCCACAATCTCCAGTACAATTCCTCTTCTGGATTTTGCATTGCCTTTTTTTTTTTCTAGGGTCTTTCTCTCCTTAGGCCAATATTAGACTGATTCGGTGGTTTCTTCGGATTTAGTAATCTAGGGTTTGACGGTGAATAGAGGTTCAAAT                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB652762             [                                                                                                                                                                       GCCGCCCTCTGTTGCCAACCGCCACCGTCCTTGCCGCCGCCGTCTCCTCCGCCTCGCGTAGTCGTCACCGTCGCCGGCCACCCCCTTCATCAGCCCCAGACCACCGGTATCCGCCCCATCCTCCCCATCCCTGTCCTGTGTCTTCCCAGTTGGGGGTTAGGGGTCGCCGCTTCCCCGACGGCCACGACATGGAGGTGGATTCTAGCGTGTGGGGGCAGCGTCGGGGCTGCGCGTCTAGGAGAAGTGTAACAGCGGCGGCGGAACATGATGGGGGTGGACGTCCCCGCCGCCCAGCCCGCCGTTGCCGAGGTCTAACTCCGCCTCCGGAAAGCGGAGCCCTTTGCCGAGGGCTACCTCCGCCTCCGGGGTGCGCTCCTTGCGCCTCTCTTGTTTAATTTGTCCACAATCTCCAGTACAATTCCGCTTCTGGATTTTGCATTGCC  TTATTTTTTCTAGGGc                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB656891             [                                                                                                                                                                                                                                                                                            ATCCTCCCCATCCCTGTCCTGTGTCTTCCCAGTTGGGGGTTAGGGGTCGCCGCTTCCCCGACGGCCACGACATGGAGGTGGATTCGAGCGTGTGGGGGCAGCGTCGGGGCTGCGCGTCGAGGAGAAGTGTAGCAGCGGCGGCGGAACATGATGGGGGTGGCCGTCGCCGCCGCCCAGCCCGCCGTTGCCGAGGTCTACCTCCGCCTCC GAAACCAAACCCCTTTGCCGAGGTCTACCTCCGCCTCCGCCCTCCGCTCCTTGCGCCTCTCTTGTTTAATTTGTCCACAATCTCCAGTACAATTCCTCTTCTGGATTTTGCATTGCC  TTTTTTTTTCTAGGGTCTTTCTCTCCTTAGGCCAATATTAGACTGATTCGGTGGTTTCTTCGGTTTTAGTAATCTAGGGTTTGACGGTGAATAGAGGTTCAAATTTGGGCGTTTTCCCAATCTATAATCTTTGAGTTATTCCAGGTCTGATAATCTAGAGTTTTGATGCCTTTTCTTACCAACGATTTCAATGGATCTCAAGGGGATAATACAGGGTTTGATCAGTTCATGGGAAATACCACCTCTGTTTCATCACAAAGTTATTTTGATGCATCGTGTTTCACTGATTCTGGCTTGACGTATGTGTGGATTCATTGTGCAGTACTACAATGCAAGAAGCACAGAAATAGTTGAGGCAGGGGAAGCTTTGGGAATGCACTGATATGCCACTAATTGCTTACACACCGAGGAGCTTCTCAGCATTTGCCCAATTTGGCTTGCCAAGACAGATGCTCGTAGC]
[+] EMBL CB656621             [                                                                                                                                                                                                                                                                                            ATCCTCCCCATCCCTGTCCTGTGTCTTCCCAGTTGGGGGTTAGGGGTCGCCGCTTCCCCGACGGCCACGACATGGAGGTGGATTCGAGCGTGTGGGGGCAGCGTCGGGGCTGCGCGTCGAGGAGAAGTGTAGCAGCGGCGGCGGAACATGATGGGGGTGGCCGTCGCCGCCGCCCAGCCCGCCGTTGCCGAGGTCTACCTCCGCCTCC GAAACCAAACCCCTTTGCCGAGGTCTACCTCCGCCTCCGCCCTCCGCTCCTTGCGCCTCTCTTGTTTAATTTGTCCACAATCTCCAGTACAATTCCTCTTCTGGATTTTGCATTGCC  TTTTTTTTTCTAGGGTCTTTCTCTCCTTAGGCCAATATTAGACTGATTCGGTGGTTTCTTCGGTTTTAGTAATCTAGGGTTTGACGGTGAATAGAGGTTCAAATTTGGGCGTTTTCCCAATCTATAATCTTTGAGTTATTCCAGGTCTGATAATCTAGAGTTTTGATGCCTTTTCTTACCAACGATTTCAATGGATCTCAAGGGGATAATACAGGGTTTGATCAGTTCATGGGAAATACCACCTCTGTTTCATCACAAAGTTATTTTGATGCATCGTGTTTCACTGATTCTGGCTTGACGTATGTGTGGATTCATTGTGCAGTACTACAATGCAAGAAGCACAGAAATAGTTGAGGCAGGGGAAGCTTTGGGAATGCACTGATATGCCACTAATTGCTTACACACCGAGGAGCTTCTCAGCATTTGCCAAATT                           ]


>consensus_7211#0 GGGCGGCCCTTGGACTTCGGCTGGGAAATCGCGGATTTAGCCGCCGCCCCCCTCCTCCCT CTCGTCTCTCCCTCTCCCGCCGCCTCCGCCTCCGCCTCCCGTCGCGCCGCCGCCTCCGTT TCCGCCTTCCGCTCGCGCCGCCGCCGCCGGTCCACCCTCCGCCCTCCGCCGCCTCCGTTG CCAACCGCCACCGTCCTTGCCGCCGCCGTCGCCTCCGCCTCGCGTAGTCGTCACCGTCGC CGGCCACCCCCTTCATCAGCCCCAGACCACCGGATCCGCCCCATCCTCCCCATCCCTGTC CTGTGTCTTCCCAGTTGGGGGTTAGGGGTCGCCGCTTCCCCGACGGCCACGACATGGAGG TGGATTCGAGCGTGTGGGGGCAGCGTCGGGGCTGCGCGTCGAGGAGAAGTGTAGCAGCGG CGGCGGAACATGATGGGGGTGGCCGTCGCCGCCGCCCAGCCCGCCGTTGCCGAGGTCTAC CTCCGCCTCCGAAACCAAACCCCTTTGCCGAGGTCTACCTCCGCCTCCGCCCTCCGCTCC TTGCGCCTCTCTTGTTTAATTTGTCCACAATCTCCAGTACAATTCCTCTTCTGGATTTTG CATTGCCTTTTTTTTTCTAGGGTCTTTCTCTCCTTAGGCCAATATTAGACTGATTCGGTG GTTTCTTCGGTTTTAGTAATCTAGGGTTTGACGGTGAATAGAGGTTCAAATTTGGGCGTT TTCCCAATCTATAATCTTTGAGTTATTCCAGGTCTGATAATCTAGAGTTTTGATGCCTTT TCTTACCAACGATTTCAATGGATCTCAAGGGGATAATACAGGGTTTGATCAGTTCATGGG AAATACCACCTCTGTTTCATCACAAAGTTATTTTGATGCATCGTGTTTCACTGATTCTGG CTTGACGTATGTGTGGATTCATTGTGCAGTACTACAATGCAAGAAGCACAGAAATAGTTG AGGCAGGGGAAGCTTTGGGAATGCACTGATATGCCACTAATTGCTTACACACCGAGGAGC TTCTCAGCATTTGCCCAATTTGGCTTGCCAAGACAGATGCTCGTAGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)