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Oryza sativa
cluster # 7260 cluster # 7260       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7260#0 length = 1194 sequences # 4  

consensusID : consensus_7260#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1194
fasta sequence
                              [GCCCGAGGGCGGAGGAGGTGGTGAGGGAGGAGGTGCGGAGGCTGTACGAGGAGCACGGCAACACGGCGGTGTCGTGGTTGAGGGCACTCTTCCACGACTGCATGGTCTACTCCTGCGACGCCTCCCTGCTGCTCCACACCACCACCACCACAGGCGTCTCCGAGCAGTCCTCCCACCGCAGC-TTCGGCATGCGCAACTTCAAGTACATCACCGCCATCAAGGCCGCCGTCGAGCGTGAGTGCCCTGCCACCGTCTCCTGCGCCGACATCCTCGCCCTGGCCGCCCGCGACGGCGTGGCCATGCTGGGTGGGCCCTCGGTGGCCATGCGGACGGGGCGGCGCGACAGCAGGGAGAGCTACTACGGCGTGGTGGAGCAGTACATCCCCAACCACAACGACAGCGTGTCCACCGTGCTGTCGAGGTTCGCGGCCATCGGGGTGGACACGGAGGGAGCGGTGGCGCTGCTGGGCGCGCACTCGGTGGGGCGCGTCCACTGCTTCAACCTGGTGGGGAGGCTGTACCCGCAGGTGGACGGCAGCATGGAGGCGGCGTACGGGGAGTACCTGCGGGGGAGGTGCCCGACGGCTGCGGCGACGGAGGACACGAGAGAGGTGGTGTACGCGCGCAACGACCGCGTCACGCCCATGCTCATCGACAACATGTACTACCGCAACCTGCTCGCCGGGCGGGGGCTCCTCCTGGTGGACCAGCAGCTGGCCTCCGACGCCCGCACGGCGCCCTACGTCCGCCGGATGGCCGCCGACAACGACTACTTCCACCAGCGCTTCGCCGCAGCGCTTCTCACCATGTCCGAGAACGCGCCGCTCACCGGCGCACAGGGGGAGGTCAGAAAAGACTGCAGGTTCGTCAACTCTAGCTAAGCTCGACTAGCTAGTAGTACACATATACATACATATATGATCGATGTAAAAATAATTGAGGTACGTTCTATGAGATCGATCGGTCTGTGAACTAATCGATCGGCGGCCTCTATCTGTTGGCATCGACTCCTCCATTGGATCTTTGTATTTTTCTCAACTTGTATGTACGTACGTATGTATGTGGGG-TCCGTCGAGTCGTGTGTGTCCGT-ACCGT-ACTGGACTCAA-TATTATGGAGT-ACATAATATATATTG-ATGCGTGGCGTTCCATCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK061013             [GCCCGAGGGCGGAGGAGGTGGTGAGGGAGGAGGTGCGGAGGCTGTACGAGGAGCACGGCAACACGGCGGTGTCGTGGTTGAGGGCACTCTTCCACGACTGCATGGTCTACTCCTGCGACGCCTCCCTGCTGCTCCACACCACCACCACCACAGGCGTCTCCGAGCAGTCCTCCCACCGCAGC TTCGGCATGCGCAACTTCAAGTACATCACCGCCATCAAGGCCGCCGTCGAGCGTGAGTGCCCTGCCACCGTCTCCTGCGCCGACATCCTCGCCCTGGCCGCCCGCGACGGCGTGGCCATGCTGGGTGGGCCCTCGGTGGCCATGCGGACGGGGCGGCGCGACAGCAGGGAGAGCTACTACGGCGTGGTGGAGCAGTACATCCCCAACCACAACGACAGCGTGTCCACCGTGCTGTCGAGGTTCGCGGCCATCGGGGTGGACACGGAGGGAGCGGTGGCGCTGCTGGGCGCGCACTCGGTGGGGCGCGTCCACTGCTTCAACCTGGTGGGGAGGCTGTACCCGCAGGTGGACGGCAGCATGGAGGCGGCGTACGGGGAGTACCTGCGGGGGAGGTGCCCGACGGCTGCGGCGACGGAGGACACGAGAGAGGTGGTGTACGCGCGCAACGACCGCGTCACGCCCATGCTCATCGACAACATGTACTACCGCAACCTGCTCGCCGGGCGGGGGCTCCTCCTGGTGGACCAGCAGCTGGCCTCCGACGCCCGCACGGCGCCCTACGTCCGCCGGATGGCCGCCGACAACGACTACTTCCACCAGCGCTTCGCCGCAGCGCTTCTCACCATGTCCGAGAACGCGCCGCTCACCGGCGCACAGGGGGAGGTCAGAAAAGACTGCAGGTTCGTCAACTCTAGCTAAGCTCGACTAGCTAGTAGTACACATATACATACATATATGATCGATGTAAAAATAATTGAGGTACGTTCTATGAGATCGATCGGTCTGTGAACTAATCGATCGGCGGCCTCTATCTGTTGGCATCGACTCCTCCATTGGATCTTTGTATTTTTCTCAACTTGTATGTACGTACGTATGTATGTGG                                                                                                                                       ]
[+] EMBL OSS1979A             [                               GGTGCGGAGGCTGTACGAGGAGCACGGCAACACGGCGGTGTCGTGGTTGAGGGCACTCTTCCACGACTGCATGGTCTACTCCTGCGACGCCTCCCTGCTGCTCCACACCACCACCACCACAGGCGTCTCCGAGCAGTCCTCCCACCGCAGCTTTCGGCATGCGCAACTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C74124               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            tgaCGCTTCGCCGCAGCGCTTCTCACCATGTCCGAGAACGCGCCGCTCACCGG NNACAGGGGGAGGTCAGAAAAGACTGCAGGTTCGTCAACTCTAGCTAAGCTCGACTAGCTAGTAGTACACATATACATACATATATGATCGATGTAAAAATAATTGAGGTACGTTCTATGAGATCGATCGGTCTGTGAACTAATCGATCGGCGGNCTCTATCTGTTGGCATCGACTCCTCCATTGGATCTTTGTAATTTTCTCAACTTGTATGTACGTACGTATGTATGTGGGG TCCGTCGAGTCGTGTGTGTCCGT ACCGT ACTGGACTCAA TATTATGGAGT ACATAATATATATTG ATGCGTGG                                                      ]
[+] EMBL C20506               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACCNTGTCCAAAAA  CNCCGCTCACCGGCGCACAGGGGGAGGTCAGAAAAGACTGCAGGTCCGTCAACTCTAGCTAAGCTCGACTAGCTAGTAGTACACATATACATACATATATGATCGATGTAAAAA AATTGAGGTACGTTCTATGAGATCGATCGGTCTGTGAACTAATCGATCGGCGGCCTCTATCTGTTGGCATCGACTCCTCCATTGGATCTTTGTATTTTTCTCAACTTGTATGTACGTACGTATGTATGTGGGGTTCCGTCGAGTCGTGTGTGTCCGTGACCGTAACTGGACTCAATTATTATGGAGTAACATAATATATATTGTATNCGTGGCGTTCCATCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_7260#0 GCCCGAGGGCGGAGGAGGTGGTGAGGGAGGAGGTGCGGAGGCTGTACGAGGAGCACGGCA ACACGGCGGTGTCGTGGTTGAGGGCACTCTTCCACGACTGCATGGTCTACTCCTGCGACG CCTCCCTGCTGCTCCACACCACCACCACCACAGGCGTCTCCGAGCAGTCCTCCCACCGCA GCTTCGGCATGCGCAACTTCAAGTACATCACCGCCATCAAGGCCGCCGTCGAGCGTGAGT GCCCTGCCACCGTCTCCTGCGCCGACATCCTCGCCCTGGCCGCCCGCGACGGCGTGGCCA TGCTGGGTGGGCCCTCGGTGGCCATGCGGACGGGGCGGCGCGACAGCAGGGAGAGCTACT ACGGCGTGGTGGAGCAGTACATCCCCAACCACAACGACAGCGTGTCCACCGTGCTGTCGA GGTTCGCGGCCATCGGGGTGGACACGGAGGGAGCGGTGGCGCTGCTGGGCGCGCACTCGG TGGGGCGCGTCCACTGCTTCAACCTGGTGGGGAGGCTGTACCCGCAGGTGGACGGCAGCA TGGAGGCGGCGTACGGGGAGTACCTGCGGGGGAGGTGCCCGACGGCTGCGGCGACGGAGG ACACGAGAGAGGTGGTGTACGCGCGCAACGACCGCGTCACGCCCATGCTCATCGACAACA TGTACTACCGCAACCTGCTCGCCGGGCGGGGGCTCCTCCTGGTGGACCAGCAGCTGGCCT CCGACGCCCGCACGGCGCCCTACGTCCGCCGGATGGCCGCCGACAACGACTACTTCCACC AGCGCTTCGCCGCAGCGCTTCTCACCATGTCCGAGAACGCGCCGCTCACCGGCGCACAGG GGGAGGTCAGAAAAGACTGCAGGTTCGTCAACTCTAGCTAAGCTCGACTAGCTAGTAGTA CACATATACATACATATATGATCGATGTAAAAATAATTGAGGTACGTTCTATGAGATCGA TCGGTCTGTGAACTAATCGATCGGCGGCCTCTATCTGTTGGCATCGACTCCTCCATTGGA TCTTTGTATTTTTCTCAACTTGTATGTACGTACGTATGTATGTGGGGTCCGTCGAGTCGT GTGTGTCCGTACCGTACTGGACTCAATATTATGGAGTACATAATATATATTGATGCGTGG CGTTCCATCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)