These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7261#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3197 fasta sequence [TCCCATCTTTCTCTCTCTTTGCACGCGGATCTCCACACTCCGCACCGCCGGAACCCTAGCCGCCGCCCGTCGCCGCCGATTTTTTTTACCCCTGGTCGCCGCTCCGTCGTGGCGAGCGGGCGGGATGAGCAGCCACCGGAAGAACTTCCGCCGCCGCACGGACGACGCCGAGGACGCCTACGGGGACGACTCGAGCAACTCCAAGCCCACAGCCACCAAGACCCAAACCCCTCCCGTTCCCAAGCCCAGGTCGCCGAGACGTCAGGGCGCGAGCCGCCTCAGCTTCGTCGAGGACGAGGACGACGATGACGCCGAGGAGGGACCTTTGTCGCAGCGCCGCCGCCCGGCTGCTACGGTCCGGCAGGCCCGCACGGCATCGCCAGCTGCGGCGACTCTCCACCGCCTCACGCCCGCCAGGGACCGCCTCAAGAGCTCTACGGCCGTGGCAGCGGCGGTTCCCGCGCCGAAGCCGTCCAACTTCCAGTCGCATGCTGGAGAGTACACGCCGGAGCGCCTCCGTGAGCTCCAGAAGAACGCCCGCCCACTCCCTGGGAGCCTCATGCGTGCACCGCCGCCCCCTCCCCCTCCAACCGCTGAAGCCCCACGACAGCGTTTGCCTGGAGCTGCCGCCAGTCCTGCTCCTGCTACAAACACCACTGCTGCTGCTGTAGAGCCCGTGGTGATTCTCAAAGGTCTGGTAAAACCTATGTCACAAGCTAGCATTGGACCAAGGAATCCATCGCAGAACGAGGACAAAGACGAAGATGAGTCAGAGGAAGAGGAGGAGGAGGAAGAAGGACCAGTCATACCTGACCGCGCAACAATTGAAGCTATCCGAGCAAAGCGGCAGCAGCTTCAACAGCCGAGGCATGCAGCACCGGATTACATCTCCCTTGATGGATGTGGTGTGCTTAGCAGTCGTGAAGCTGCTGGTGGATCCAGCGACGAGGATGATGATGAGACACGCGGCCGTATTGCAATGTACGCTGAGAAGTCAGATAGCCAGAGGAGCACGAAAGGTGTATTTGGCGTGATCAATAATAGAGGTCCTGCTGCCAGTTTGGGGGTTATCAATGATGGTTTCAGGGAGGTTGAGGATGAAAAGGATGACGATGAGGATGAGGAAGAGAGGAAATGGGAGGAGGAGCAGTTCAGGAAGGGGCTTGGTAGGAGGGTGGATGATGCTTCTGCTCAGAGAGCAGCGAATGGTGGACCAGCTCCTGTGCAGGTCCAGCCGCAACCATCCGGATACTCAATCGATCCCCGTTACCAGCCTTCCTTTAGCGGGGTTTTGCCTGGGACTTCTATTTTTGCATCTGGGAGTGCAGAGTTCCTGTCAATCGCTCAACAAGCTGATGTAGCAAGCAAAGCCCTGCAGGAGAACATCAGGAAGCTTAAGGAGACCCATAAGACAACAGTGGATGCTTTAGTCAAGACTGACACACATCTTACTGAAGCTCTTTCAGAGATATCTAGCCTTGAGAGTGGTTTACAAGATGCAGAAAGGAAGTTTGTGTACATGCAGGAGCTCCGAAATTACATTTCTGTCATGTGTGATTTCTTGAATGATAAGGCATTCTATATAGAGGAATTGGAGGAGCACATGCAGAAGCTGCATGAGAATCGAGTGACTGCTGTCTCAGAGAGGAGGGCAGCTGATCTAGCTGGTGAATCAAGTGTTATCGAAGCTGCCGTCAATGCAGCAGTATCTGTCCTTAGCAAAGGATCAAGCTCAGCTTATCTATCTGCTGCATCTAATGCTGCACAAGCGGCGGCAGCTGCTGCTAGGGAAAGTTCAAACCTACCACCTGAGCTGGATGAATTCGGCAGAGATATCAATATGCAGAAGCGAATGGATCTTAAGCGTAGGGAAGAAGACAGGAGGCGAAGAAAAATTCGATCAGAATCTAAAAGGTTGTCATCTGAAGGGAGGAGTGCAAATAATGAACATATCGAAGGGGAACTAAGCACTGATGAGAGTGATAGTGAGAGCAGTGCCTATCTGTCCAGCCGTGATGAGTTGCTCAAGACTGCTGATCTTGTATTCAGTGATGCTGCCGAGGAATACTCAAGCCTTAGAATTGTTAAGGACAAGTTTGAAGGATGGAAAACTCAGTATCCTCTGGCTTACCGAGATGCTCATGTAGCTCTGAGTGCGCCATCTGTGTTCACCCCTTATGTCAGACTGGAGCTTTTGAAGTGGGATCCTCTCCATGAAACAACTGATTTCTTTGGCATGGAGTGGCACAAGATTCTTTTTGATTATGGTGAGCAAAACAGTGAAAGTGGCACTGACCCTAACAATGTGGACAAGGACCTCATTCCAGTATTAGTAGAGAAGGTGGCTCTTCCTATTTTGCACCACCGTATTATGCACTGTTGGGATATTTTAAGCACCCAAAGAACCAAAAACGCTGTGGATGCAATTAATATGGTCATTAGCTATTTACCAACCTCAAGCAAGGCATTGCATCAACTATTGGCCGCTGTCAATAGTCGTCTGACTGAGGCCATTGCTGACATTTCAGTGCCAGCTTGGGGATCAATGGTGACAAGGACTGTTCCAGGTGCTTCGCAGTATGCTGCTCATAGATTTGGAGTTGCGATACGTCTTCTTAAAAATGTGTGTTTGTGGAAGGATATTTTTGCAAAACCTGTTTTAGAGAAGCTTGCTCTGGAAGAATTGTTGAAGGGGAAAATTCTTCCTCATATGAAGAGTATCATTTTGGATGCCCATGATGCAATTGCTAGGGCTGAGCGGATATCTGCATTACTTAAAGGAGTGTGGTCTTCACCAAGCCAAAAGTTGCAGCCTTTCATAGATCTCGTGGTAGAACTAGGAAACAAGTTGGAGAGGCGACACATGTCAGGCATAAGTGAGGAAGAGACACGTGGGCTGGCTCGTCGTTTGAAAGACATATTGGTAGAACTGAATGAATATGATAAAGCTAGAGCTATTTTGAAGACTTTTCAGATCAGAGAAGCCCTTTAGCTCTTATTCGGCATACCACAAGAATTCCAGTTTTGACTGTGATACAGGTTCTTAATCCTTCTGCTTTAGGAAATGTTGTAACTTCATCAGGTTTTCTGTACATTAAATGATCATGAGTTCCTCGTTCAATCCTGCATGATGTTATCCATACAAATTTTATGGGGGCTTCTCAATTCAGAAATTATGGTCATTTTTAATTACCATT] [+] EMBL AK069032 [TCCCATCTTTCTCTCTCTTTGCACGCGGATCTCCACACTCCGCACCGCCGGAACCCTAGCCGCCGCCCGTCGCCGCCGATTTTTTTTACCCCTGGTCGCCGCTCCGTCGTGGCGAGCGGGCGGGATGAGCAGCCACCGGAAGAACTTCCGCCGCCGCACGGACGACGCCGAGGACGCCTACGGGGACGACTCGAGCAACTCCAAGCCCACAGCCACCAAGACCCAAACCCCTCCCGTTCCCAAGCCCAGGTCGCCGAGACGTCAGGGCGCGAGCCGCCTCAGCTTCGTCGAGGACGAGGACGACGATGACGCCGAGGAGGGACCTTTGTCGCAGCGCCGCCGCCCGGCTGCTACGGTCCGGCAGGCCCGCACGGCATCGCCAGCTGCGGCGACTCTCCACCGCCTCACGCCCGCCAGGGACCGCCTCAAGAGCTCTACGGCCGTGGCAGCGGCGGTTCCCGCGCCGAAGCCGTCCAACTTCCAGTCGCATGCTGGAGAGTACACGCCGGAGCGCCTCCGTGAGCTCCAGAAGAACGCCCGCCCACTCCCTGGGAGCCTCATGCGTGCACCGCCGCCCCCTCCCCCTCCAACCGCTGAAGCCCCACGACAGCGTTTGCCTGGAGCTGCCGCCAGTCCTGCTCCTGCTACAAACACCACTGCTGCTGCTGTAGAGCCCGTGGTGATTCTCAAAGGTCTGGTAAAACCTATGTCACAAGCTAGCATTGGACCAAGGAATCCATCGCAGAACGAGGACAAAGACGAAGATGAGTCAGAGGAAGAGGAGGAGGAGGAAGAAGGACCAGTCATACCTGACCGCGCAACAATTGAAGCTATCCGAGCAAAGCGGCAGCAGCTTCAACAGCCGAGGCATGCAGCACCGGATTACATCTCCCTTGATGGATGTGGTGTGCTTAGCAGTCGTGAAGCTGCTGGTGGATCCAGCGACGAGGATGATGATGAGACACGCGGCCGTATTGCAATGTACGCTGAGAAGTCAGATAGCCAGAGGAGCACGAAAGGTGTATTTGGCGTGATCAATAATAGAGGTCCTGCTGCCAGTTTGGGGGTTATCAATGATGGTTTCAGGGAGGTTGAGGATGAAAAGGATGACGATGAGGATGAGGAAGAGAGGAAATGGGAGGAGGAGCAGTTCAGGAAGGGGCTTGGTAGGAGGGTGGATGATGCTTCTGCTCAGAGAGCAGCGAATGGTGGACCAGCTCCTGTGCAGGTCCAGCCGCAACCATCCGGATACTCAATCGATCCCCGTTACCAGCCTTCCTTTAGCGGGGTTTTGCCTGGGACTTCTATTTTTGCATCTGGGAGTGCAGAGTTCCTGTCAATCGCTCAACAAGCTGATGTAGCAAGCAAAGCCCTGCAGGAGAACATCAGGAAGCTTAAGGAGACCCATAAGACAACAGTGGATGCTTTAGTCAAGACTGACACACATCTTACTGAAGCTCTTTCAGAGATATCTAGCCTTGAGAGTGGTTTACAAGATGCAGAAAGGAAGTTTGTGTACATGCAGGAGCTCCGAAATTACATTTCTGTCATGTGTGATTTCTTGAATGATAAGGCATTCTATATAGAGGAATTGGAGGAGCACATGCAGAAGCTGCATGAGAATCGAGTGACTGCTGTCTCAGAGAGGAGGGCAGCTGATCTAGCTGGTGAATCAAGTGTTATCGAAGCTGCCGTCAATGCAGCAGTATCTGTCCTTAGCAAAGGATCAAGCTCAGCTTATCTATCTGCTGCATCTAATGCTGCACAAGCGGCGGCAGCTGCTGCTAGGGAAAGTTCAAACCTACCACCTGAGCTGGATGAATTCGGCAGAGATATCAATATGCAGAAGCGAATGGATCTTAAGCGTAGGGAAGAAGACAGGAGGCGAAGAAAAATTCGATCAGAATCTAAAAGGTTGTCATCTGAAGGGAGGAGTGCAAATAATGAACATATCGAAGGGGAACTAAGCACTGATGAGAGTGATAGTGAGAGCAGTGCCTATCTGTCCAGCCGTGATGAGTTGCTCAAGACTGCTGATCTTGTATTCAGTGATGCTGCCGAGGAATACTCAAGCCTTAGAATTGTTAAGGACAAGTTTGAAGGATGGAAAACTCAGTATCCTCTGGCTTACCGAGATGCTCATGTAGCTCTGAGTGCGCCATCTGTGTTCACCCCTTATGTCAGACTGGAGCTTTTGAAGTGGGATCCTCTCCATGAAACAACTGATTTCTTTGGCATGGAGTGGCACAAGATTCTTTTTGATTATGGTGAGCAAAACAGTGAAAGTGGCACTGACCCTAACAATGTGGACAAGGACCTCATTCCAGTATTAGTAGAGAAGGTGGCTCTTCCTATTTTGCACCACCGTATTATGCACTGTTGGGATATTTTAAGCACCCAAAGAACCAAAAACGCTGTGGATGCAATTAATATGGTCATTAGCTATTTACCAACCTCAAGCAAGGCATTGCATCAACTATTGGCCGCTGTCAATAGTCGTCTGACTGAGGCCATTGCTGACATTTCAGTGCCAGCTTGGGGATCAATGGTGACAAGGACTGTTCCAGGTGCTTCGCAGTATGCTGCTCATAGATTTGGAGTTGCGATACGTCTTCTTAAAAATGTGTGTTTGTGGAAGGATATTTTTGCAAAACCTGTTTTAGAGAAGCTTGCTCTGGAAGAATTGTTGAAGGGGAAAATTCTTCCTCATATGAAGAGTATCATTTTGGATGCCCATGATGCAATTGCTAGGGCTGAGCGGATATCTGCATTACTTAAAGGAGTGTGGTCTTCACCAAGCCAAAAGTTGCAGCCTTTCATAGATCTCGTGGTAGAACTAGGAAACAAGTTGGAGAGGCGACACATGTCAGGCATAAGTGAGGAAGAGACACGTGGGCTGGCTCGTCGTTTGAAAGACATATTGGTAGAACTGAATGAATATGATAAAGCTAGAGCTATTTTGAAGACTTTTCAGATCAGAGAAGCCCTTTAGCTCTTATTCGGCATACCACAAGAATTCCAGTTTTGACTGTGATACAGGTTCTTAATCCTTCTGCTTTAGGAAATGTTGTAACTTCATCAGGTTTTCTGTACATTAAATGATCATGAGTTCCTCGTTCAATCCTGCATGATGTTATCCATACAAATTTTATGGGGGCTTCTCAATTCAGAAATTATGGTCATTTTTAATTACCATT] [+] EMBL CB648903 [ CTCCTGTGCAGGTCCAGCCGCAACCATCCGGATACTCAATCGATCCCCGTTACCAGCCTTCCTTTAGCGGGGTTTTGCCTGGGACTTCTATTTTTGCATCTGGGAGTGCAGAGTTCCTGTCAATCGCTCAACAAGCTGATGTAGCAAGCAAAGCCCTGCAGGAGAACATCAGGAAGCTTAAGGAGACCCATAAGACAACAGTGGATGCTTTAGTCAAGACTGACACACATCTTACTGAAGCTCTTTCAGAGATATCTAGCCTTGAGAGTGGTTTACAAGATGCAGAAAGGAAGTTTGTGTACATGCAGGAGCTCCGAAATTACATTTCTGTCATGTGTGATTTCTTGAATGATAAGGCATTCTATATAGAGGAATTGGAGGAGCACATGCAGAAGCTGCATGAGAATCGAGTGACTGCTGTCTCAGAGAGGAGGGCAGCTGATCTAGCTGATGAATCAAGTGTTATCGAAGCTGCCGTCAATGCAGCAGTATCTGTCCTTAGCAAAGGATCAAGCTCAGCTTATCTATCTGCTGCATCTAATGCTGCACAAGCGGCGGCAGCTGCTGCTAGGGAAAGTTCAAACCTACCACCTGAGCTGGATGAATTCGGCAGAGATATCAATATGCAGAAGCGAATGGATCTTAAGCGTAGGGAAGAAGACAGGAGGCGAAGAAAAATTCGATCAGAATCTAAAAGGTTGTCATCTGAAGGGAGGAGTGCAAATAATGAACATATCGAAGGGGAACTAAGCACTGATGAGAGTGATAGTGAGAGCAGTGCCTATCTGTCCAGCCGTGATGAGTTGCTCAAGACTG ] [+] EMBL OSR24891A [ GCAAAGGATCAAGCTCAGCTTATCTATCTGCTGCATCTAATGCTGCACAAGCGGCGGCAGCTGCTGCTAGGGAAAGTTCAAACCTACCACCTGAGCTGGATGAATTCGGCAGAGATATCAATATGCAGAAGCGAATGGNTCTTAAGCGTAGGGAAGAAGACAGGAGGCGAAGAAAAATTCGATCAGAATCTAAAAGGTTGTCATCTGAAGGGAGGAGTNCAAATAATGAACATATCGAAGGGGAACTAAGCACTGATGAGAGTAATAGTGAGAGCAGTGCCTATCTGTCCAGCCGTGATGAGTTGCTCAAGACTNCTGATCTTGTATTCAGTGATGCTGCCGAGGAATACTCAAGCCTTAGAATTGTTAAGG ] [+] EMBL AU162439 [ TTTTGAAGACTTTTCAGATCAGAGAAGCCCTTTAGCTCTTATTCGGCATACCACAAGAATTCCAGTTTTGACTGTGATACAGGTTCTTAATCCTTCTGCTTTAGGAAATGTTGTAACTTCATCAGGTTTTCTGTACATTAAATGATCATGAGTTCCTCGTTCAAaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||