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Oryza sativa
cluster # 7268 cluster # 7268       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7268#0 length = 1033 sequences # 4  

consensusID : consensus_7268#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1033
fasta sequence
                              [TGCTGCTAGCCTGAGTAGTTTCGTGTGTCTGAGGATCTCCTGATCTCCTCCCTCCCTCTCTCTCTCTCCATCCCCATCCATCCTCCTTTTCCTCCTATTCCCCTGTGGAATCTCATCTTCTTCTTCATTCCACTTCTCTTCTCTCTCGTGGTCGCATGATCTCATCAGGAGCGCAGATGCTACGGCGTCCTTGAGAATTGCAGAGAGGCAAAAGAAGAACAAGCAGAGAGCAAGAACAAGCAGAAGCAGAAGCAAAGAGGCGATGGACGGCGACACGCTGTCGGCGGCGGCGGCGGAGGACGGGAAGGTGCTGCACGCGTTCCAGACGAGCTTCGTGCAGGTGCAGAGCTTGCTGGACCAGAACCGGGTGCTGATCAACGAGATCAACCAGAACCACGAGTCCAAGGTCCCCGGCGACCTCTCCCGCAACGTCGGCCTCATCCGCGAGCTCAACAACAACATCCGCCGCGTCGTCGACCTC-TACGCCGACCTCTCCTCCCTCTTCGCCGCCTCCTCCCCCGGCCCCGCCGCCTCCGAGGGCGCCTCCGTCGGCACCGCCGTCCGCCACGCCGGCCACAAGCGTGTCAGGTCCACCCACCTCGACTGAACAAGAACCATTCTCATTTTCTCAATTAACCACCTCCAATTCTCCAATTCCAATTCCAATTTCGGCTAGCTTAGCTTAAAGATCGAGCTCTTGCTTGCTTGTATATCTAGCTATAATCTATAAATCTACATATGAGCAATTAACGCCCCCTCACAACTACTCCCGATGTTTCATATTATAAGACTTTCTAACATTTGCCTACATTCATATATATGTTAATGAATCTAGACATATATGTGTGCCTAGATTCATTAACATCTGTATGAATGTGGGTAATGCTAGAAAGTCTTATAACCTAAAACGGAGGTAGTACAATCATCTTCGGTTCTTTCTTGTAGCTGTTGTTTCATCTTGTTGTAGCTGATATGATGAGCTATTATATGGATTTTGATGCAACAATGCCAATACAAGAGAGTGAGCACTTCT]

[+] EMBL AK071843             [TGCTGCTAGCCTGAGTAGTTTCGTGTGTCTGAGGATCTCCTGATCTCCTCCCTCCCTCTCTCTCTCTCCATCCCCATCCATCCTCCTTTTCCTCCTATTCCCCTGTGGAATCTCATCTTCTTCTTCATTCCACTTCTCTTCTCTCTCGTGGTCGCATGATCTCATCAGGAGCGCAGATGCTACGGCGTCCTTGAGAATTGCAGAGAGGCAAAAGAAGAACAAGCAGAGAGCAAGAACAAGCAGAAGCAGAAGCAAAGAGGCGATGGACGGCGACACGCTGTCGGCGGCGGCGGCGGAGGACGGGAAGGTGCTGCACGCGTTCCAGACGAGCTTCGTGCAGGTGCAGAGCTTGCTGGACCAGAACCGGGTGCTGATCAACGAGATCAACCAGAACCACGAGTCCAAGGTCCCCGGCGACCTCTCCCGCAACGTCGGCCTCATCCGCGAGCTCAACAACAACATCCGCCGCGTCGTCGACCTC TACGCCGACCTCTCCTCCCTCTTCGCCGCCTCCTCCCCCGGCCCCGCCGCCTCCGAGGGCGCCTCCGTCGGCACCGCCGTCCGCCACGCCGGCCACAAGCGTGTCAGGTCCACCCACCTCGACTGAACAAGAACCATTCTCATTTTCTCAATTAACCACCTCCAATTCTCCAATTCCAATTCCAATTTCGGCTAGCTTAGCTTAAAGATCGAGCTCTTGCTTGCTTGTATATCTAGCTATAATCTATAAATCTACATATGAGCAATTAACGCCCCCTCACAACTACTCCCGATGTTTCATATTATAAGACTTTCTAACATTTGCCTACATTCATATATATGTTAATGAATCTAGACACATATGTGTGCCTAGATTCATTAACATCTGTATGAATGTGGGTAATGCTAGAAAGTCTTATAACCTAAAACGGAGGTAGTACAATCATCTTCGGTTCTTTCTTGTAGCTGTTGTTTCATCTTGTTGTAGCTGATATGATGAGCTATTATATGGATTTTGATGCAACAATGCCAATACAAGAGAGTGAG       ]
[+] EMBL AK067462             [                                                                                                                                      TCTCTTCTCTCTCGTGGTCGCATGATCTCATCAGGAGCGCAGATGCTACGGCGTCCTTGAGAATTGCAGAGAGGCAAAAGAAGAACAAGCAGAGAGCAAGAACAAGCAGAAGCAGAAGCAAAGAGGCGATGGACGGCGACACGCTGTCGGCGGCGGCGGCGGAGGACGGGAAGGTGCTGCACGCGTTCCAGACGAGCTTCGTGCAGGTGCAGAGCTTGCTGGACCAGAACCGGGTGCTGATCAACGAGATCAACCAGAACCACGAGTCCAAGGTCCCCGGCGACCTCTCCCGCAACGTCGGCCTCATCCGCGAGCTCAACAACAACATCCGCCGCGTCGTCGACCTC TACGCCGACCTCTCCTCCCTCTTCGCCGCCTCCTCCCCCGGCCCCGCCGCCTCCAAGGGCGCCTCCGTCGGCACCGCCGTCCGCCACGCCGGCCACAAGCGTGTCAGGTCCACCCACCTCGACTGAACAAGAACCATTCTCATTTTCTCAATTAACCACCTCCAATTCTCCAATTCCAATTCCAATTTCGGCTAGCTTAGCTTAAAGATCGAGCTCTTGCTTGCTTGTATATCTAGCTATAATCTATAAATCTACATATGAGCAATTAACGCCCCCTCACAACTACTCCCGATGTTTCATATTATAAGACTTTCTAACATTTGCCTACATTCATATATATGTTAATGAATCCAGACATATATGTGTGCCTAGATTCATTAACATCTGTATGAATGTGGGTAATGCTAGAAAGTCTTATAACCTAAAACGTAGGTAGTACAATCATCTTCGGTTCTTTCTTGTAGCTGTTGTTTCATCTTGTTGTAGCTGATATGATGAGCTATTATATGGATTTTGATGCAACAATGCCAATACAAGAGAGTGAGCACTTCT]
[+] EMBL AK104174             [                                                                                                                                       CTCTTCTCTCTCGTGGTCGCATGATCTCATCAGGAGCGCAGATGCTACGGCGTCCTTGAGAATTGCAGAGAGGCAAAAGAAGAACAAGCAGAGAGCAAGAACAAGCAGAAGCAGAAGCAAAGAGGCGATGGACGGCGACACGCTGTCGGCGGCGGCGGCGGAGGACGGGAAGGTGCTGCACGCGTTCCAGACGAGCTTCGTGCAGGTGCAGAGCTTGCTGGACCAGAACCGGGTGCTGATCAACGAGATCAACCAGAACCACGAGTCCAAGGTCCCCGGCGACCTCTCCCGCAACGTCGGCCTCATCCGCGAGCTCAACAACAACATCCGCCGCGTCGTCGACCTC TACGCCGACCTCTCCTCCCTCTTCGCCGCCTCCTCCCCCGGCCCCGCCGCCTCCGAGGGCGCCTCCGTCGGCACCGCCGTCCGCCACGCCGGCCACAAGCGTGTCAGGTCCACCCACCTCGACTGAACAAGAACCATTCTCATTTTCTCAATTAACCACCTCCAATTCTCCAATTCCAATTCCAATTTCGGCTAGCTTAGCTTAAAGATCGAGCTCTTGCTTGCTTGTATATCTAGCTATAATCTATAAATCTACATATGAGCAATTAACGCCCCCTCACAACTACTCCCGATGTTTCATATTATAAGACTTTCTAACATTTGCCTACATTCATATATATGTTAATGAATCTAGACATATATGTGTGCCTAGATTCATTAACATCTGTATGAATGTGGGTAATGCTAGAAAGTCTTATAACCTAAAACGGAGGTAGTACAATCATCTTCGGTTCTTTCTTGTAGCTGTTGTTTCATCTTGTTGTAGCTGATATGATGAGCTATTATATGGATTTTGATGCAACAATGCCAATACAAGAGAGTGAGCACTTCT]
[+] EMBL OSC30251             [                                                                                                                                                                                                                                         cnananGCAGAAGCAGAAGCAAAGAGGCGATGGACGGCGACACGCTGTCGGCGGCGGCGGCGGAGGACGGGAAGGTGCTGCACGCNTTCCAGACGAGCTTCGTGCAGGTGCAGAGCTTGCTGGACCAGAACCGGGTGCTGATCAACGAGATCAACCAGAACCACGAGTCCAAGGTCCCCGGCGACCTCTCCCGCAACGTCGGCCTCATCCGCGAGCTCAACAACAACATCCGCCGCGTCGTNGACCTCTTACGNCGACCTCTCCTCCCTCTTCGCCGNCTCCTCCCCCGGCCCCGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_7268#0 TGCTGCTAGCCTGAGTAGTTTCGTGTGTCTGAGGATCTCCTGATCTCCTCCCTCCCTCTC TCTCTCTCCATCCCCATCCATCCTCCTTTTCCTCCTATTCCCCTGTGGAATCTCATCTTC TTCTTCATTCCACTTCTCTTCTCTCTCGTGGTCGCATGATCTCATCAGGAGCGCAGATGC TACGGCGTCCTTGAGAATTGCAGAGAGGCAAAAGAAGAACAAGCAGAGAGCAAGAACAAG CAGAAGCAGAAGCAAAGAGGCGATGGACGGCGACACGCTGTCGGCGGCGGCGGCGGAGGA CGGGAAGGTGCTGCACGCGTTCCAGACGAGCTTCGTGCAGGTGCAGAGCTTGCTGGACCA GAACCGGGTGCTGATCAACGAGATCAACCAGAACCACGAGTCCAAGGTCCCCGGCGACCT CTCCCGCAACGTCGGCCTCATCCGCGAGCTCAACAACAACATCCGCCGCGTCGTCGACCT CTACGCCGACCTCTCCTCCCTCTTCGCCGCCTCCTCCCCCGGCCCCGCCGCCTCCGAGGG CGCCTCCGTCGGCACCGCCGTCCGCCACGCCGGCCACAAGCGTGTCAGGTCCACCCACCT CGACTGAACAAGAACCATTCTCATTTTCTCAATTAACCACCTCCAATTCTCCAATTCCAA TTCCAATTTCGGCTAGCTTAGCTTAAAGATCGAGCTCTTGCTTGCTTGTATATCTAGCTA TAATCTATAAATCTACATATGAGCAATTAACGCCCCCTCACAACTACTCCCGATGTTTCA TATTATAAGACTTTCTAACATTTGCCTACATTCATATATATGTTAATGAATCTAGACATA TATGTGTGCCTAGATTCATTAACATCTGTATGAATGTGGGTAATGCTAGAAAGTCTTATA ACCTAAAACGGAGGTAGTACAATCATCTTCGGTTCTTTCTTGTAGCTGTTGTTTCATCTT GTTGTAGCTGATATGATGAGCTATTATATGGATTTTGATGCAACAATGCCAATACAAGAG AGTGAGCACTTCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)