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Oryza sativa
cluster # 7295 cluster # 7295       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7295#0 length = 1320 sequences # 4  

consensusID : consensus_7295#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1320
fasta sequence
                              [CCTCACCATACAGCTGCTTTCTCTCTCTCTCTCCATCCACCCGAAGCAGAATCCCCAAAACAACAGCGAGAGAAAAAAAATTCACGCGGCGAAGCCAAAATTTTTTGTTGATTTCGATTTGGACATAAACCCTAGCTCCAATCTCCCCATCGCCGCGTCGGCCCCGAACCCGTGCGCCCCCCCATCGCTCGCTGAATCGAAGGGCGCCTACCAGTCGATTCCCCCAAGACGAGGTAATCCGCTCGACCCCCTCGAGAGAGAGAGAGCCTGGGAGAGAAATCGGTGTTGTTTTCTGCTGAATCGATCGGGTTGGCGGGCGATTTAGGGTTTTGGGAAGGGTGGCTCGCCGCCCTCTCCGAAGGGGACTAGCCTGCGCGTCTCGATCTCGCGGGGAGCTAGGGTTTTGTGATCCGAGTGCGAGGAGGGACTGGTGTCGCCCTGGTTCTGATGAGAATTGGCAGTGGAATGCTCAGATTGGCTGCCGGCGACGACGAGAGGAGCAGCTCCCTTGGCAGCGGCGGCGGAGGAGGCGCCAGATTCACCGCCCCCAAGGTCCGCACGCGCGATAAGGGCGCGCTCGTGGCCCTCTGATTCGAGGAGGGTTGCTGGTGCGTAGACGTGGAGCCTTCTCTGAGGAGAGTGGGAGATGACGAGGATCTTCGTGCAGCGCGGGGCTGCCGGCTCCTCGTCCAGCTCCAGCCGCTCGGGGTCACAGACACTGCAGCAGCAGCAGCAACTGCAGGCGACATCAGCGGTTGCCCGGGAGGAGGAGCTGCCGCCGCAGCCTCATCAGCATCCATCGGAGCTCACGGCTTCAGACAATATAACTGACCATCTAGTGGAGGATGCTGATAACAGCAGTAATAGTAATAAGCCATTGGGGCTAGATGATCCCACATCAGAGAGTTCAAGCTCTGCAGAGGAGAGGGCTGTTATGGAGAAACCTCCCAAAGACGACTCCAGTGTGATCGATCCTGCTTTCTTGGTGGAGGAATTAACAGGCCTCCAGTTTTCTGATCAGTTTGAGCAGGAAAATCTAGTGCAGTCAGGTATTGGTCCATCACAGATTGCTGGTGCAGCATCACACCCACCACCTCCACCAGCTCCACCAGCCCCACCACCGAAACCATCGTCTGGTAATAATGGGTTAAGGAGAATGGGGTCTGGAAGCTCAAACAATGCACGGATTGGATCTTCAAGAAGGCCAGTTGCTTGGCCACCAGTGGCAGTTCGGTCATCTGCTTCGGGTTCCCGACCTTCTTCACCTAGATCACTTGCTGATAGTGAAGGGTATAATAGTGCAGATGAGCAGGGCCCCTG]

[+] EMBL AK101471             [CCTCACCATACAGCTGCTTTCTCTCTCTCTCTCCATCCACCCGAAGCAGAATCCCCAAAACAACAGCGAGAGAAAAAAAATTCACGCGGCGAAGCCAAAATTTTTTGTTGATTTCGATTTGGACATAAACCCTAGCTCCAATCTCCCCATCGCCGCGTCGGCCCCGAACCCGTGCGCCCCCCCATCGCTCGCTGAATCGAAGGGCGCCTACCAGTCGATTCCCCCAAGACGAGGTAATCCGCTCGACCCCCTCGAGAGAGAGAGAGCCTGGGAGAGAAATCGGTGTTGTTTTCTGCTGAATCGATCGGGTTGGCGGGCGATTTAGGGTTTTGGGAAGGGTGGCTCGCCGCCCTCTCCGAAGGGGACTAGCCTGCGCGTCTCGATCTCGCGGGGAGCTAGGGTTTTGTGATCCGAGTGCGAGGAGGGACTGGTGTCGCCCTGGTTCTGATGAGAATTGGCAGTGGAATGCTCAGATTGGCTGCCGGCGACGACGAGAGGAGCAGCTCCCTTGGCAGCGGCGGCGGAGGAGGCGCCAGATTCACCGCCCCCAAGGTCCGCACGCGCGATAAGGGCGCGCTCGTGGCCCTCTGATTCGAGGAGGGTTGCTGGTGCGTAGACGTGGAGCCTTCTCTGAGGAGAGTGGGAGATGACGAGGATCTTCGTGCAGCGCGGGGCTGCCGGCTCCTCGTCCAGCTCCAGCCGCTCGGGGTCACAGACACTGCAGCAGCAGCAGCAACTGCAGGCGACATCAGCGGTTGCCCGGGAGGAGGAGCTGCCGCCGCAGCCTCATCAGCATCCATCGGAGCTCACGGCTTCAGACAATATAACTGACCATCTAGTGGAGGATGCTGATAACAGCAGTAATAGTAATAAGCCATTGGGGCTAGATGATCCCACATCAGAGAGTTCAAGCTCTGCAGAGGAGAGGGCTGTTATGGAGAAACCTCCCAAAGACGACTCCAGTGTGATCGATCCTGCTTTCTTGGTGGAGGAATTAACAGGCCTCCAGTTTTCTGATCAGTTTGAGCAGGAAAATCTAGTGCAGTCAGGTATTGGTCCATCACAGATTGCTGGTGCAGCATCACACCCACCACCTCCACCAGCTCCACCAGCCCCACCACCGAAACCATCGTCTGGTAATAATGGGTTAAGGAGAATGGGGTCTGGAAGCTCAAACAATGCACGGATTGGATCTTCAAGAAGGCCAGTTGCTTGGCCACCAGTGGCAGTTCGGTCATCTGCTTCGGGTTCCCGACCTTCTTCACCTAGATCACTTGCTGATAGTGAAGGGTATAATAGTGCAGATGAGCAGGGCCCCTG]
[+] EMBL AU181338             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGAGGATCTTCGTGCAGCGCGGGGCTGCCGGCTCCTCGTCCAGCTCCAGCCGCTCGGGGTCACAGACACTGCAGCAGCAGCAGCAACTGCAGGCGACATCAGCGGTTGCCCGGGAGGAGGAGCTGCCGCCGCAGCCTCATCAGCATCCATCGGAGCTCACGGCTTCAGACAATATAACTGACCATCTAGTGGAGGATGCTGATAACAGCAGTAATAGTAATAAGCCATTGGGGCTAGATGATCCCACATCAGAGAGTTCAAGCTCTGCAGAGGAGAGGGCTGTTATGGAGAAACCTCCCAAAGACGACTCCAGTGTGATCGATCCTGCTTTCTTGGTGGAGGAATTAACAGGCCTCCAGTTTTCTGATCAGTTTGAGCAGGAAAATCTAGTGCAGTCAGGTATTGGTCCATCACAGATTGCTGGTGCAGCATCA                                                                                                                                                                                                                                            ]
[+] EMBL CB640703             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCTCGTCCAGCTCCAGCCGCTCGGGGTCACAGACACTGCATCAGCAGCAGCAACTGCAGGCGACATCAGCGGTTGCCCGGGAGGAGGAGCTGCCGCCGCAGCCTCATCAGCATCCATCGGAGCTCACGGCTTCAGACAATATAACTGACCATCTAGTGGAGGATGCTGATAACAGCAGTAATAGTAATAAGCCATTGGGGCTAGATGATCCCACATCAGAGAGTTCAAGCTCTGCAGAGGAGAGGGCTGTTATGGAGAAACCTCCCAAAGACGACTCCAGTGTGATCGATCCTGCTTTCTTGGTGGAGGAATTAACAGGCCTCCAGTTTTCTGATCAGTTTGAGCAGGAAAATCTAGTGCAGTCAAGTATTGGTCCATCACAGATTGCTGGTGCAGNATC                                                                                                                                                                                                                                             ]
[+] EMBL BP184655             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCCTCCAGTTTTCTGATCAGTTTGAGCAGGAAAATCTAGTGCAGTCAGGTATTGGTCCATCACAGATTGCTGGTGCAGCATCACACCCACCACCTCCACCAGCTCCACCAGCCCCACCACCGAAACCATCGTCTGGTAATAATGGGTTAAGGAGAATGGGGTCTGGAAGCTCAAACAATGCACGGATTGGATCTTCAAGAAGGCCAGTTGCTTGGCCACCAGTGGCAGTTCGGTCATCTGCTTCGGGTTCCCGACCTTCTTCACCTAGATCACTTGCTGATAGTGAAGGGTATAATAGTGCAGATGAGCAGGGCCCCTG]


>consensus_7295#0 CCTCACCATACAGCTGCTTTCTCTCTCTCTCTCCATCCACCCGAAGCAGAATCCCCAAAA CAACAGCGAGAGAAAAAAAATTCACGCGGCGAAGCCAAAATTTTTTGTTGATTTCGATTT GGACATAAACCCTAGCTCCAATCTCCCCATCGCCGCGTCGGCCCCGAACCCGTGCGCCCC CCCATCGCTCGCTGAATCGAAGGGCGCCTACCAGTCGATTCCCCCAAGACGAGGTAATCC GCTCGACCCCCTCGAGAGAGAGAGAGCCTGGGAGAGAAATCGGTGTTGTTTTCTGCTGAA TCGATCGGGTTGGCGGGCGATTTAGGGTTTTGGGAAGGGTGGCTCGCCGCCCTCTCCGAA GGGGACTAGCCTGCGCGTCTCGATCTCGCGGGGAGCTAGGGTTTTGTGATCCGAGTGCGA GGAGGGACTGGTGTCGCCCTGGTTCTGATGAGAATTGGCAGTGGAATGCTCAGATTGGCT GCCGGCGACGACGAGAGGAGCAGCTCCCTTGGCAGCGGCGGCGGAGGAGGCGCCAGATTC ACCGCCCCCAAGGTCCGCACGCGCGATAAGGGCGCGCTCGTGGCCCTCTGATTCGAGGAG GGTTGCTGGTGCGTAGACGTGGAGCCTTCTCTGAGGAGAGTGGGAGATGACGAGGATCTT CGTGCAGCGCGGGGCTGCCGGCTCCTCGTCCAGCTCCAGCCGCTCGGGGTCACAGACACT GCAGCAGCAGCAGCAACTGCAGGCGACATCAGCGGTTGCCCGGGAGGAGGAGCTGCCGCC GCAGCCTCATCAGCATCCATCGGAGCTCACGGCTTCAGACAATATAACTGACCATCTAGT GGAGGATGCTGATAACAGCAGTAATAGTAATAAGCCATTGGGGCTAGATGATCCCACATC AGAGAGTTCAAGCTCTGCAGAGGAGAGGGCTGTTATGGAGAAACCTCCCAAAGACGACTC CAGTGTGATCGATCCTGCTTTCTTGGTGGAGGAATTAACAGGCCTCCAGTTTTCTGATCA GTTTGAGCAGGAAAATCTAGTGCAGTCAGGTATTGGTCCATCACAGATTGCTGGTGCAGC ATCACACCCACCACCTCCACCAGCTCCACCAGCCCCACCACCGAAACCATCGTCTGGTAA TAATGGGTTAAGGAGAATGGGGTCTGGAAGCTCAAACAATGCACGGATTGGATCTTCAAG AAGGCCAGTTGCTTGGCCACCAGTGGCAGTTCGGTCATCTGCTTCGGGTTCCCGACCTTC TTCACCTAGATCACTTGCTGATAGTGAAGGGTATAATAGTGCAGATGAGCAGGGCCCCTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)