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Oryza sativa
cluster # 7309 cluster # 7309       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7309#0 length = 1795 sequences # 2  
consensus_7309#1 length = 1384 sequences # 2  

consensusID : consensus_7309#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1795
fasta sequence
                              [GCGCATCTCAGAGCCTTCGACAAGTTCAGGGGCCTACCCGACCCTCCCGAGTACACCCTCCACCTCGGCCTACCCAATGTCTCCGCCGCCGCAGCCACTCCCAACAACTGCAACTCCTACCCCCCATCCAGGAGGAGGGGGAGGAAGAGGAAGGAGGTGGAGGAGGAAATCCTCGATGACTCCGATGAGGATTGGGACCCACGCAAGAAGGGTGCCACTGACTCCGATTCCGAAGTCGATTTCGACCGCAAGAGGGTCTCCAAGGGCGGCAGGGGCAGCGGTGCACCACGCGGGAGGCCACGCGGGAGGCCTAGGAAAAACAATGCTGGGAGGCCTGCACACCTCAAGGACGAGGACGAGGTGATCCAAGAAACAGTGGAGTATCAATATCCACCAGCCGCTGACATGTTTCTACAGCTTACATCCGTTGCTGCTGATCCATTCAACTTCAAGGGCTATGACTCTGTGCCTGTCATTCTTAGCTTCTTCTCAAAATACAAGGACTCAGAAGTGCCGGCCACATACGACGACAAGGAGCTGCTGCAGACATTGGGTGGCAAGAAAGGTAGAAAAAATACGGCCAGAAGCTTGTACCCAGCTGCAAAAGAAGAAGGTGACTTAGAGGTGGCGGATGGCCATAGGGGTCGGAGGAAGTCAGCAGGGAGTATCTACTCAGCAAGTAATGCAGAAGCCATCCCTTCTGTGGATGACATCAATAGTATATTCCGTATGCACGGGCCAATCATGGAGGGTGCGACTGAAATCAACAAGAAATCAAAGATCGCAAGAGTAGTGTTTTCTAAGAGTGCTGATGCTGAACAGGCATATAGCAGTTCGGGAAAGTATAATGCATTTGGTCCAGCCCTTCTCAGGTATGATCTCAAATACCTGCCAATGGTTCCTCAAGTTCCTTAGATGGTGCAGGCTAAACTGGATATGTCGCCATTTGGAGGGAAATGCGTAATGAAGACTGGAGCTAAGGGATCATAAGATGTTCGCGTTACTGACTTAGAGCTAGGAATGCCCACTGGCCAGGCCGGACGACTTGTTCGCTGGTCGAGTGAGCAATTTTTTAGGTTTTATCTGGTTAAATGCATTCCGAGGACTGGTTGTGTACTTGAGTTCAGAGGTAGTTTATATTATTAAATTATTTAGATGATAGATGATCTCGGCGCGATCCCTCTCCTTGTTATCTTAGCGATTTATCCTTTTTTGTATTGCCTAGAAATCATTGCACAGCTGTGGATCTTTATGCTATGTTCTCTGAGCTAATATTTCCGTCTTTAGATCCTGTCTCACATTATCCTAGCTTGCAGGATGCAGTATCAACATTTGTTTTCAGTAGTTATAATTTCAGCAGTCAGAAATTTATCATGCAATGCTGAAAGCTAGCTGCGGAGTCTCTCATGACCATTAAATTAAAGCTATGCTTGTGTAAGTGAGAAGTTCTCAAACCATGTTTTCTCCTTCAGCTGTTTAGCCAGTGTCAGCAAGGCTATTTGAACAGCTGTATCAGCGTCATCCAGCTTCAAAGTAAGTTGTTCTAGATCCGACTTCAAAAGGACCTGTTGCATTGGATTGGTAGGTGTGTTCGGGTTATCTGGACATGTGAATTTAACGTTGAAGATGGTAAGAGCACCAGGAACCAGGATAAGAACAGAGAACAGTGATGGAGTCCTCCAAGTTTTCAATGATTTGATCAATACCTACCGAAACGCCTTGTATATGTTGCCATGCTGACATGCCTATTCCACCAATGGACATGATCAACCTTTGCGATTACTAACGTCATACG]

[+] EMBL AK105310             [GCGCATCTCAGAGCCTTCGACAAGTTCAGGGGCCTACCCGACCCTCCCGAGTACACCCTCCACCTCGGCCTACCCAATGTCTCCGCCGCCGCAGCCACTCCCAACAACTGCAACTCCTACCCCCCATCCAGGAGGAGGGGGAGGAAGAGGAAGGAGGTGGAGGAGGAAATCCTCGATGACTCCGATGAGGATTGGGACCCACGCAAGAAGGGTGCCACTGACTCCGATTCCGAAGTCGATTTCGACCGCAAGAGGGTCTCCAAGGGCGGCAGGGGCAGCGGTGCACCACGCGGGAGGCCACGCGGGAGGCCTAGGAAAAACAATGCTGGGAGGCCTGCACACCTCAAGGACGAGGACGAGGTGATCCAAGAAACAGTGGAGTATCAATATCCACCAGCCGCTGACATGTTTCTACAGCTTACATCCGTTGCTGCTGATCCATTCAACTTCAAGGGCTATGACTCTGTGCCTGTCATTCTTAGCTTCTTCTCAAAATACAAGGACTCAGAAGTGCCGGCCACATACGACGACAAGGAGCTGCTGCAGACATTGGGTGGCAAGAAAGGTAGAAAAAATACGGCCAGAAGCTTGTACCCAGCTGCAAAAGAAGAAGGTGACTTAGAGGTGGCGGATGGCCATAGGGGTCGGAGGAAGTCAGCAGGGAGTATCTACTCAGCAAGTAATGCAGAAGCCATCCCTTCTGTGGATGACATCAATAGTATATTCCGTATGCACGGGCCAATCATGGAGGGTGCGACTGAAATCAACAAGAAATCAAAGATCGCAAGAGTAGTGTTTTCTAAGAGTGCTGATGCTGAACAGGCATATAGCAGTTCGGGAAAGTATAATGCATTTGGTCCAGCCCTTCTCAGGTATGATCTCAAATACCTGCCAATGGTTCCTCAAGTTCCTTAGATGGTGCAGGCTAAACTGGATATGTCGCCATTTGGAGGGAAATGCGTAATGAAGACTGGAGCTAAGGGATCATAAGATGTTCGCGTTACTGACTTAGAGCTAGGAATGCCCACTGGCCAGGCCGGACGACTTGTTCGCTGGTCGAGTGAGCAATTTTTTAGGTTTTATCTGGTTAAATGCATTCCGAGGACTGGTTGTGTACTTGAGTTCAGAGGTAGTTTATATTATTAAATTATTTAGATGATAGATGATCTCGGCGCGATCCCTCTCCTTGTTATCTTAGCGATTTATCCTTTTTTGTATTGCCTAGAAATCATTGCACAGCTGTGGATCTTTATGCTATGTTCTCTGAGCTAATATTTCCGTCTTTAGATCCTGTCTCACATTATCCTAGCTTGCAGGATGCAGTATCAACATTTGTTTTCAGTAGTTATAATTTCAGCAGTCAGAAATTTATCATGCAATGCTGAAAGCTAGCTGCGGAGTCTCTCATGACCATTAAATTAAAGCTATGCTTGTGTAAGTGAGAAGTTCTCAAACCATGTTTTCTCCTTCAGCTGTTTAGCCAGTGTCAGCAAGGCTATTTGAACAGCTGTATCAGCGTCATCCAGCTTCAAAGTAAGTTGTTCTAGATCCGACTTCAAAAGGACCTGTTGCATTGGATTGGTAGGTGTGTTCGGGTTATCTGGACATGTGAATTTAACGTTGAAGATGGTAAGAGCACCAGGAACCAGGATAAGAACAGAGAACAGTGATGGAGTCCTCCAAGTTTTCAATGATTTGATCAATACCTACCGAAACGCCTTGTATATGTTGCCATGCTGACATGCCTATTCCACCAATGGACATGATCAACCTTTGCGATTACTAACGTCATACG]
[+] EMBL AU225384             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gccgctTGACTTAGAGCTAGGAATGCCCACTGGCCAGGCCGGACGACTTGTTCGCTGGTCGAGTGAGCAATTTTTTAGGTTTTATCTGGTTAAATGCATTCCGAGGACTGGTTGTGTACTTGAGTTCAGAGGTAGTTTATATTATTAAATTATTTAGATGGTAGATGATCTCGGCGCGATCCCTCTCCTTGTTATCTTAGCGATTTATCCTTTTTTGTATTGCCTAGAAATCATTGCACAGCTGTGGATagcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_7309#0 GCGCATCTCAGAGCCTTCGACAAGTTCAGGGGCCTACCCGACCCTCCCGAGTACACCCTC CACCTCGGCCTACCCAATGTCTCCGCCGCCGCAGCCACTCCCAACAACTGCAACTCCTAC CCCCCATCCAGGAGGAGGGGGAGGAAGAGGAAGGAGGTGGAGGAGGAAATCCTCGATGAC TCCGATGAGGATTGGGACCCACGCAAGAAGGGTGCCACTGACTCCGATTCCGAAGTCGAT TTCGACCGCAAGAGGGTCTCCAAGGGCGGCAGGGGCAGCGGTGCACCACGCGGGAGGCCA CGCGGGAGGCCTAGGAAAAACAATGCTGGGAGGCCTGCACACCTCAAGGACGAGGACGAG GTGATCCAAGAAACAGTGGAGTATCAATATCCACCAGCCGCTGACATGTTTCTACAGCTT ACATCCGTTGCTGCTGATCCATTCAACTTCAAGGGCTATGACTCTGTGCCTGTCATTCTT AGCTTCTTCTCAAAATACAAGGACTCAGAAGTGCCGGCCACATACGACGACAAGGAGCTG CTGCAGACATTGGGTGGCAAGAAAGGTAGAAAAAATACGGCCAGAAGCTTGTACCCAGCT GCAAAAGAAGAAGGTGACTTAGAGGTGGCGGATGGCCATAGGGGTCGGAGGAAGTCAGCA GGGAGTATCTACTCAGCAAGTAATGCAGAAGCCATCCCTTCTGTGGATGACATCAATAGT ATATTCCGTATGCACGGGCCAATCATGGAGGGTGCGACTGAAATCAACAAGAAATCAAAG ATCGCAAGAGTAGTGTTTTCTAAGAGTGCTGATGCTGAACAGGCATATAGCAGTTCGGGA AAGTATAATGCATTTGGTCCAGCCCTTCTCAGGTATGATCTCAAATACCTGCCAATGGTT CCTCAAGTTCCTTAGATGGTGCAGGCTAAACTGGATATGTCGCCATTTGGAGGGAAATGC GTAATGAAGACTGGAGCTAAGGGATCATAAGATGTTCGCGTTACTGACTTAGAGCTAGGA ATGCCCACTGGCCAGGCCGGACGACTTGTTCGCTGGTCGAGTGAGCAATTTTTTAGGTTT TATCTGGTTAAATGCATTCCGAGGACTGGTTGTGTACTTGAGTTCAGAGGTAGTTTATAT TATTAAATTATTTAGATGATAGATGATCTCGGCGCGATCCCTCTCCTTGTTATCTTAGCG ATTTATCCTTTTTTGTATTGCCTAGAAATCATTGCACAGCTGTGGATCTTTATGCTATGT TCTCTGAGCTAATATTTCCGTCTTTAGATCCTGTCTCACATTATCCTAGCTTGCAGGATG CAGTATCAACATTTGTTTTCAGTAGTTATAATTTCAGCAGTCAGAAATTTATCATGCAAT GCTGAAAGCTAGCTGCGGAGTCTCTCATGACCATTAAATTAAAGCTATGCTTGTGTAAGT GAGAAGTTCTCAAACCATGTTTTCTCCTTCAGCTGTTTAGCCAGTGTCAGCAAGGCTATT TGAACAGCTGTATCAGCGTCATCCAGCTTCAAAGTAAGTTGTTCTAGATCCGACTTCAAA AGGACCTGTTGCATTGGATTGGTAGGTGTGTTCGGGTTATCTGGACATGTGAATTTAACG TTGAAGATGGTAAGAGCACCAGGAACCAGGATAAGAACAGAGAACAGTGATGGAGTCCTC CAAGTTTTCAATGATTTGATCAATACCTACCGAAACGCCTTGTATATGTTGCCATGCTGA CATGCCTATTCCACCAATGGACATGATCAACCTTTGCGATTACTAACGTCATACG



consensusID : consensus_7309#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1384
fasta sequence
                              [GCGCATCTCAGAGCCTTCGACAAGTTCAGGGGCCTACCCGACCCTCCCGAGTACACCCTCCACCTCGGCCTACCCAATGTCTCCGCCGCCGCAGCCACTCCCAACAACTGCAACTCCTACCCCCCATCCAGGAGGAGGGGGAGGAAGAGGAAGGAGGTGGAGGAGGAAATCCTCGATGACTCCGATGAGGATTGGGACCCACGCAAGAAGGGTGCCACTGACTCCGATTCCGAAGTCGATTTCGACCGCAAGAGGGTCTCCAAGGGCGGCAGGGGCAGCGGTGCACCACGCGGGAGGCCACGCGGGAGGCCTAGGAAAAACAATGCTGGGAGGCCTGCACACCTCAAGGACGAGGACGAGGTGATCCAAGAAACAGTGGAGTATCAATATCCACCAGCCGCTGACATGTTTCTACAGCTTACATCCGTTGCTGCTGATCCATTCAACTTCAAGGGCTATGACTCTGTGCCTGTCATTCTTAGCTTCTTCTCAAAATACAAGGACTCAGAAGTGCCGGCCACATACGACGACAAGGAGCTGCTGCAGACATTGGGTGGCAAGAAAGGTAGAAAAAATACGGCCAGAAGCTTGTACCCAGCTGCAAAAGAAGAAGGTGACTTAGAGGTGGCGGATGGCCATAGGGGTCGGAGGAAGTCAGCAGGGAGTATCTACTCAGCAAGAAAGGCAGAAGACTCATATTGGTGTGATATTATAATCAGTGATTTTGATGATGGAGACACATCAAGTGACTATGAGGGCCGCAAAATGAAGCGGCTGTCTCAGAACAGGAGTTTTAATAAGAAGATGAAGCAGGAGGTTGCACCTCAAGATGAGGCCTCTGCTGATTCACCTGCTGTGAAACAGGCAGATGGACCGGCAGCTCTGATCTTACATTTTAGTAATGCAGAAGCCATCCCTTCTGTGGATGACATCAATAGTATATTCCGTATGCACGGGCCAATCATGGAGGGTGCGACTGAAATCAACAAGAAATCAAAGATCGCAAGAGTAGTGTTTTCTAAGAGTGCTGATGCTGAACAGGCATATAGCAGTTCGGGAAAGTATAATGCATTTGGTCCAGCCCTTCTCAGGTATGATCTCAAATACCTGCCAATGGTTCCTCAAGTTCCTTAGATGGTGCAGGCTAAACTGGATATGTCGCCATTTGGAGGGAAATGCGTAATGAAGACTGGAGCTAAGGGATCATAAGATGTTCGCGTTACTGACTTAGAGCTAGGAATGCCCACTGGCCAGGCCGGACGACTTGTTCGCTGGTCGAGTGAGCAATTTTTTAGGTTTTATCTGGTTAAATGCATTCCGAGGACTGGTTGTGTACTTGAGTTCAGAGGTAGTTTATATTATTAAATTATTTAGATGGTAGATG]

[+] EMBL AK072101             [GCGCATCTCAGAGCCTTCGACAAGTTCAGGGGCCTACCCGACCCTCCCGAGTACACCCTCCACCTCGGCCTACCCAATGTCTCCGCCGCCGCAGCCACTCCCAACAACTGCAACTCCTACCCCCCATCCAGGAGGAGGGGGAGGAAGAGGAAGGAGGTGGAGGAGGAAATCCTCGATGACTCCGATGAGGATTGGGACCCACGCAAGAAGGGTGCCACTGACTCCGATTCCGAAGTCGATTTCGACCGCAAGAGGGTCTCCAAGGGCGGCAGGGGCAGCGGTGCACCACGCGGGAGGCCACGCGGGAGGCCTAGGAAAAACAATGCTGGGAGGCCTGCACACCTCAAGGACGAGGACGAGGTGATCCAAGAAACAGTGGAGTATCAATATCCACCAGCCGCTGACATGTTTCTACAGCTTACATCCGTTGCTGCTGATCCATTCAACTTCAAGGGCTATGACTCTGTGCCTGTCATTCTTAGCTTCTTCTCAAAATACAAGGACTCAGAAGTGCCGGCCACATACGACGACAAGGAGCTGCTGCAGACATTGGGTGGCAAGAAAGGTAGAAAAAATACGGCCAGAAGCTTGTACCCAGCTGCAAAAGAAGAAGGTGACTTAGAGGTGGCGGATGGCCATAGGGGTCGGAGGAAGTCAGCAGGGAGTATCTACTCAGCAAGAAAGGCAGAAGACTCATATTGGTGTGATATTATAATCAGTGATTTTGATGATGGAGACACATCAAGTGACTATGAGGGCCGCAAAATGAAGCGGCTGTCTCAGAACAGGAGTTTTAATAAGAAGATGAAGCAGGAGGTTGCACCTCAAGATGAGGCCTCTGCTGATTCACCTGCTGTGAAACAGGCAGATGGACCGGCAGCTCTGATCTTACATTTTAGTAATGCAGAAGCCATCCCTTCTGTGGATGACATCAATAGTATATTCCGTATGCACGGGCCAATCATGGAGGGTGCGACTGAAATCAACAAGAAATCAAAGATCGCAAGAGTAGTGTTTTCTAAGAGTGCTGATGCTGAACAGGCATATAGCAGTTCGGGAAAGTATAATGCATTTGGTCCAGCCCTTCTCAGGTATGATCTCAAATACCTGCCAATGGTTCCTCAAGTTCCTTAGATGGTGCAGGCTAAACTGGATATGTCGCCATTTGGAGGGAAATGCGTAATGAAGACTGGAGCTAAGGGATCATAAGATGTTCGCGTTACTGACTTAGAGCTAGGAATGCCCACTGGCCAGGCCGGACGACTTGTTCGCTGGTCGAGTGAGCAATTTTTTAGGTTTTATCTGGTTAAATGCATTCCGAGGACTGGTTGTGTACTTGAGTTCAGAGGTAGTTTATATTATTAAATTATTTAGATGGTAGATG]
[+] EMBL AK103290             [GCGCATCTCAGAGCCTTCGACAAGTTCAGGGGCCTACCCGACCCTCCCGAGTACACCCTCCACCTCGGCCTACCCAATGTCTCCGCCGCCGCAGCCACTCCCAACAACTGCAACTCCTACCCCCCATCCAGGAGGAGGGGGAGGAAGAGGAAGGAGGTGGAGGAGGAAATCCTCGATGACTCCGATGAGGATTGGGACCCACGCAAGAAGGGTGCCACTGACTCCGATTCCGAAGTCGATTTCGACCGCAAGAGGGTCTCCAAGGGCGGCAGGGGCAGCGGTGCACCACGCGGGAGGCCACGCGGGAGGCCTAGGAAAAACAATGCTGGGAGGCCTGCACACCTCAAGGACGAGGACGAGGTGATCCAAGAAACAGTGGAGTATCAATATCCACCAGCCGCTGACATGTTTCTACAGCTTACATCCGTTGCTGCTGATCCATTCAACTTCAAGGGCTATGACTCTGTGCCTGTCATTCTTAGCTTCTTCTCAAAATACAAGGACTCAGAAGTGCCGGCCACATACGACGACAAGGAGCTGCTGCAGACATTGGGTGGCAAGAAAGGTAGAAAAAATACGGCCAGAAGCTTGTACCCAGCTGCAAAAGAAGAAGGTGACTTAGAGGTGGCGGATGGCCATAGGGGTCGGAGGAAGTCAGCAGGGAGTATCTACTCAGCAAGAAAGGCAGAAGACTCATATTGGTGTGATATTATAATCAGTGATTTTGATGATGGAGACACATCAAGTGACTATGAGGGCCGCAAAATGAAGCGGCTGTCTCAGAACAGGAGTTTTAATAAGAAGATGAAGCAGGAGGTTGCACCTCAAGATGAGGCCTCTGCTGATTCACCTGCTGTGAAACAGGCAGATGGACCGGCAGCTCTGATCTTACATTTTAGTAATGCAGAAGCCATCCCTTCTGTGGATGACATCAATAGTATATTCCGTATGCACGGGCCAATCATGGAGGGTGCGACTGAAATCAACAAGAAATCAAAGATCGCAAGAGTAGTGTTTTCTAAGAGTGCTGATGCTGAACAGGCATATAGCAGTTCGGGAAAGTATAATGCATTTGGTCCAGCCCTTCTCAGGTATGATCTCAAATACCTGCCAATGGTTCCTCAAGTTCCTTAGATGGTGCAGGCTAAACTGGATATGTCGCCATTTGGAGGGAAATGCGTAATGAAGACTGGAGCTAAGGGATCATAAGATGTTCGCGTTACTGACTTAGAGCTAGGAATGCCCACTGGCCAGGCCGGACGACTTGTTCGCTGGTCGAGTGAGCAATTTTTTAGGTTTTATCTGGTTAAATGCATTCCGAGGACTGGTTGTGTACTTGAGTTCAGAGGTAGTTTATATTATTAAATTA               ]


>consensus_7309#1 GCGCATCTCAGAGCCTTCGACAAGTTCAGGGGCCTACCCGACCCTCCCGAGTACACCCTC CACCTCGGCCTACCCAATGTCTCCGCCGCCGCAGCCACTCCCAACAACTGCAACTCCTAC CCCCCATCCAGGAGGAGGGGGAGGAAGAGGAAGGAGGTGGAGGAGGAAATCCTCGATGAC TCCGATGAGGATTGGGACCCACGCAAGAAGGGTGCCACTGACTCCGATTCCGAAGTCGAT TTCGACCGCAAGAGGGTCTCCAAGGGCGGCAGGGGCAGCGGTGCACCACGCGGGAGGCCA CGCGGGAGGCCTAGGAAAAACAATGCTGGGAGGCCTGCACACCTCAAGGACGAGGACGAG GTGATCCAAGAAACAGTGGAGTATCAATATCCACCAGCCGCTGACATGTTTCTACAGCTT ACATCCGTTGCTGCTGATCCATTCAACTTCAAGGGCTATGACTCTGTGCCTGTCATTCTT AGCTTCTTCTCAAAATACAAGGACTCAGAAGTGCCGGCCACATACGACGACAAGGAGCTG CTGCAGACATTGGGTGGCAAGAAAGGTAGAAAAAATACGGCCAGAAGCTTGTACCCAGCT GCAAAAGAAGAAGGTGACTTAGAGGTGGCGGATGGCCATAGGGGTCGGAGGAAGTCAGCA GGGAGTATCTACTCAGCAAGAAAGGCAGAAGACTCATATTGGTGTGATATTATAATCAGT GATTTTGATGATGGAGACACATCAAGTGACTATGAGGGCCGCAAAATGAAGCGGCTGTCT CAGAACAGGAGTTTTAATAAGAAGATGAAGCAGGAGGTTGCACCTCAAGATGAGGCCTCT GCTGATTCACCTGCTGTGAAACAGGCAGATGGACCGGCAGCTCTGATCTTACATTTTAGT AATGCAGAAGCCATCCCTTCTGTGGATGACATCAATAGTATATTCCGTATGCACGGGCCA ATCATGGAGGGTGCGACTGAAATCAACAAGAAATCAAAGATCGCAAGAGTAGTGTTTTCT AAGAGTGCTGATGCTGAACAGGCATATAGCAGTTCGGGAAAGTATAATGCATTTGGTCCA GCCCTTCTCAGGTATGATCTCAAATACCTGCCAATGGTTCCTCAAGTTCCTTAGATGGTG CAGGCTAAACTGGATATGTCGCCATTTGGAGGGAAATGCGTAATGAAGACTGGAGCTAAG GGATCATAAGATGTTCGCGTTACTGACTTAGAGCTAGGAATGCCCACTGGCCAGGCCGGA CGACTTGTTCGCTGGTCGAGTGAGCAATTTTTTAGGTTTTATCTGGTTAAATGCATTCCG AGGACTGGTTGTGTACTTGAGTTCAGAGGTAGTTTATATTATTAAATTATTTAGATGGTA GATG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7309#0      GCGCATCTCAGAGCCTTCGACAAGTTCAGGGGCCTACCCGACCCTCCCGAGTACACCCTC 60
consensus_7309#1      GCGCATCTCAGAGCCTTCGACAAGTTCAGGGGCCTACCCGACCCTCCCGAGTACACCCTC 60
                      ************************************************************

consensus_7309#0      CACCTCGGCCTACCCAATGTCTCCGCCGCCGCAGCCACTCCCAACAACTGCAACTCCTAC 120
consensus_7309#1      CACCTCGGCCTACCCAATGTCTCCGCCGCCGCAGCCACTCCCAACAACTGCAACTCCTAC 120
                      ************************************************************

consensus_7309#0      CCCCCATCCAGGAGGAGGGGGAGGAAGAGGAAGGAGGTGGAGGAGGAAATCCTCGATGAC 180
consensus_7309#1      CCCCCATCCAGGAGGAGGGGGAGGAAGAGGAAGGAGGTGGAGGAGGAAATCCTCGATGAC 180
                      ************************************************************

consensus_7309#0      TCCGATGAGGATTGGGACCCACGCAAGAAGGGTGCCACTGACTCCGATTCCGAAGTCGAT 240
consensus_7309#1      TCCGATGAGGATTGGGACCCACGCAAGAAGGGTGCCACTGACTCCGATTCCGAAGTCGAT 240
                      ************************************************************

consensus_7309#0      TTCGACCGCAAGAGGGTCTCCAAGGGCGGCAGGGGCAGCGGTGCACCACGCGGGAGGCCA 300
consensus_7309#1      TTCGACCGCAAGAGGGTCTCCAAGGGCGGCAGGGGCAGCGGTGCACCACGCGGGAGGCCA 300
                      ************************************************************

consensus_7309#0      CGCGGGAGGCCTAGGAAAAACAATGCTGGGAGGCCTGCACACCTCAAGGACGAGGACGAG 360
consensus_7309#1      CGCGGGAGGCCTAGGAAAAACAATGCTGGGAGGCCTGCACACCTCAAGGACGAGGACGAG 360
                      ************************************************************

consensus_7309#0      GTGATCCAAGAAACAGTGGAGTATCAATATCCACCAGCCGCTGACATGTTTCTACAGCTT 420
consensus_7309#1      GTGATCCAAGAAACAGTGGAGTATCAATATCCACCAGCCGCTGACATGTTTCTACAGCTT 420
                      ************************************************************

consensus_7309#0      ACATCCGTTGCTGCTGATCCATTCAACTTCAAGGGCTATGACTCTGTGCCTGTCATTCTT 480
consensus_7309#1      ACATCCGTTGCTGCTGATCCATTCAACTTCAAGGGCTATGACTCTGTGCCTGTCATTCTT 480
                      ************************************************************

consensus_7309#0      AGCTTCTTCTCAAAATACAAGGACTCAGAAGTGCCGGCCACATACGACGACAAGGAGCTG 540
consensus_7309#1      AGCTTCTTCTCAAAATACAAGGACTCAGAAGTGCCGGCCACATACGACGACAAGGAGCTG 540
                      ************************************************************

consensus_7309#0      CTGCAGACATTGGGTGGCAAGAAAGGTAGAAAAAATACGGCCAGAAGCTTGTACCCAGCT 600
consensus_7309#1      CTGCAGACATTGGGTGGCAAGAAAGGTAGAAAAAATACGGCCAGAAGCTTGTACCCAGCT 600
                      ************************************************************

consensus_7309#0      GCAAAAGAAGAAGGTGACTTAGAGGTGGCGGATGGCCATAGGGGTCGGAGGAAGTCAGCA 660
consensus_7309#1      GCAAAAGAAGAAGGTGACTTAGAGGTGGCGGATGGCCATAGGGGTCGGAGGAAGTCAGCA 660
                      ************************************************************

consensus_7309#0      GGGAGTATCTACTCAGCAAG---------------------------------------- 680
consensus_7309#1      GGGAGTATCTACTCAGCAAGAAAGGCAGAAGACTCATATTGGTGTGATATTATAATCAGT 720
                      ********************                                        

consensus_7309#0      ------------------------------------------------------------
consensus_7309#1      GATTTTGATGATGGAGACACATCAAGTGACTATGAGGGCCGCAAAATGAAGCGGCTGTCT 780
                                                                                  

consensus_7309#0      ------------------------------------------------------------
consensus_7309#1      CAGAACAGGAGTTTTAATAAGAAGATGAAGCAGGAGGTTGCACCTCAAGATGAGGCCTCT 840
                                                                                  

consensus_7309#0      -----------------------------------------------------------T 681
consensus_7309#1      GCTGATTCACCTGCTGTGAAACAGGCAGATGGACCGGCAGCTCTGATCTTACATTTTAGT 900
                                                                                 *

consensus_7309#0      AATGCAGAAGCCATCCCTTCTGTGGATGACATCAATAGTATATTCCGTATGCACGGGCCA 741
consensus_7309#1      AATGCAGAAGCCATCCCTTCTGTGGATGACATCAATAGTATATTCCGTATGCACGGGCCA 960
                      ************************************************************

consensus_7309#0      ATCATGGAGGGTGCGACTGAAATCAACAAGAAATCAAAGATCGCAAGAGTAGTGTTTTCT 801
consensus_7309#1      ATCATGGAGGGTGCGACTGAAATCAACAAGAAATCAAAGATCGCAAGAGTAGTGTTTTCT 1020
                      ************************************************************

consensus_7309#0      AAGAGTGCTGATGCTGAACAGGCATATAGCAGTTCGGGAAAGTATAATGCATTTGGTCCA 861
consensus_7309#1      AAGAGTGCTGATGCTGAACAGGCATATAGCAGTTCGGGAAAGTATAATGCATTTGGTCCA 1080
                      ************************************************************

consensus_7309#0      GCCCTTCTCAGGTATGATCTCAAATACCTGCCAATGGTTCCTCAAGTTCCTTAGATGGTG 921
consensus_7309#1      GCCCTTCTCAGGTATGATCTCAAATACCTGCCAATGGTTCCTCAAGTTCCTTAGATGGTG 1140
                      ************************************************************

consensus_7309#0      CAGGCTAAACTGGATATGTCGCCATTTGGAGGGAAATGCGTAATGAAGACTGGAGCTAAG 981
consensus_7309#1      CAGGCTAAACTGGATATGTCGCCATTTGGAGGGAAATGCGTAATGAAGACTGGAGCTAAG 1200
                      ************************************************************

consensus_7309#0      GGATCATAAGATGTTCGCGTTACTGACTTAGAGCTAGGAATGCCCACTGGCCAGGCCGGA 1041
consensus_7309#1      GGATCATAAGATGTTCGCGTTACTGACTTAGAGCTAGGAATGCCCACTGGCCAGGCCGGA 1260
                      ************************************************************

consensus_7309#0      CGACTTGTTCGCTGGTCGAGTGAGCAATTTTTTAGGTTTTATCTGGTTAAATGCATTCCG 1101
consensus_7309#1      CGACTTGTTCGCTGGTCGAGTGAGCAATTTTTTAGGTTTTATCTGGTTAAATGCATTCCG 1320
                      ************************************************************

consensus_7309#0      AGGACTGGTTGTGTACTTGAGTTCAGAGGTAGTTTATATTATTAAATTATTTAGATGATA 1161
consensus_7309#1      AGGACTGGTTGTGTACTTGAGTTCAGAGGTAGTTTATATTATTAAATTATTTAGATGGTA 1380
                      ********************************************************* **

consensus_7309#0      GATGATCTCGGCGCGATCCCTCTCCTTGTTATCTTAGCGATTTATCCTTTTTTGTATTGC 1221
consensus_7309#1      GATG-------------------------------------------------------- 1384
                      ****                                                        

consensus_7309#0      CTAGAAATCATTGCACAGCTGTGGATCTTTATGCTATGTTCTCTGAGCTAATATTTCCGT 1281
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      CTTTAGATCCTGTCTCACATTATCCTAGCTTGCAGGATGCAGTATCAACATTTGTTTTCA 1341
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      GTAGTTATAATTTCAGCAGTCAGAAATTTATCATGCAATGCTGAAAGCTAGCTGCGGAGT 1401
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      CTCTCATGACCATTAAATTAAAGCTATGCTTGTGTAAGTGAGAAGTTCTCAAACCATGTT 1461
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      TTCTCCTTCAGCTGTTTAGCCAGTGTCAGCAAGGCTATTTGAACAGCTGTATCAGCGTCA 1521
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      TCCAGCTTCAAAGTAAGTTGTTCTAGATCCGACTTCAAAAGGACCTGTTGCATTGGATTG 1581
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      GTAGGTGTGTTCGGGTTATCTGGACATGTGAATTTAACGTTGAAGATGGTAAGAGCACCA 1641
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      GGAACCAGGATAAGAACAGAGAACAGTGATGGAGTCCTCCAAGTTTTCAATGATTTGATC 1701
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      AATACCTACCGAAACGCCTTGTATATGTTGCCATGCTGACATGCCTATTCCACCAATGGA 1761
consensus_7309#1      ------------------------------------------------------------
                                                                                  

consensus_7309#0      CATGATCAACCTTTGCGATTACTAACGTCATACG 1795
consensus_7309#1      ----------------------------------
                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)