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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7328 cluster # 7328       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7328#0 length = 724 sequences # 4  

consensusID : consensus_7328#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 724
fasta sequence
                              [TTTTTTTTTTTTCACGATCCTTCAACAGAACAACATATGGTCTATCA-CCAACCATCTCAATCTGGCACACAGCTTGGGCAGCTTTCATAAATATCAC-TGGGTCTCTATATACAACAAACGCCAAGTTCTGGACAAAATTGCGCGGGGTAACCCTTGGATTTGCATGACGATTTGCAGCGGTGACAAGACTGTGGCGTATCTCTAATTCCATTGCTTGCTGAAAAGTGTGGGGATCTTCCAAAATATGACGAATGATTGTAGAAGCCACACTGTTGAATCCAGAAAACAAGCTACTTGGGGGCAAACTTAGCAATGCATGCAGACCACCAGACTCAAGAAAACAAATAGCAGCAGCATGAAGTTTAGTCAACGTGGCACATAACTGAAAAATAGCATGCATGGTAGCAAAAGGCAACTGCTTCTGAATGCATTTACAGCAAATCTTCAAAAGCTGCTTCTGGTCCTCCAAGTCCAATAACCCTGTGCTCGATGAAGCTTCTGAGTCCTTTTTCTTGCTATCATCAATCACCACTGATGTTTGGGGATTTGAATTATCCTTTTTAAGGACATCGAGTTCAGTAACATCTGGCACCTTTGGGTCCAACTGGAGCATCCTATCAATAGAAAGAAAGCATGAAGTAACCCAATTTGGAACATCACTTATCTCCCCTTGTCTCGGCCTCTACTCCCAGCTGCACAGCAGGTTCAAAGCAACCTTGACAAG]

[+] EMBL CA759354             [TTTTTTTTTTTTCACGATCCTTCAACAGAACAACATATGGTCTATCA CCAACCATCTCAATCTGGCACACAGCTTGGGCAGCTTTCATAAATATCAC TGGGTCTCTATATACAACAAACGCCAAGTTCTGGACAAAATTGCGCGGGGTAACCCTTGGATTTGCATGACGATTTGCAGCGGTGACAAGACTGTGGCGTATCTCTAATTCCATTGCTTGCTGAAAAGTGTGGGGATCTTCCAAAATATGACGAATGATTGTAGAAGCCACACTGTTGAATCCAGAAAACAAGCTACTTGGGGGCAAACTTAGCAATGCATGCAGACCACCAGACTCAAGAAAACAAATAGCAGCAGCATGAAGTTTAGTCAACGTGGCACATAACTGAAAAATAGCATGCATGGTAGCAAAAGGCAACTGCTTCTGAATGCATTTACAGCAAATCTTCAAAAGCTGCTTCTGGTCCTCCAAGTCCAATAACCCTGTGCTCGATGAAGCTTCTGAGTCCTTTTTCTTGCTATCATCAATCACCACTGATGTTTGGGGATTTGAATTATCCTTTTTAAGGACATCGAGTTCAGTAACATCTGGCACCTTTGGGTCCAACTGGAGCATCCTATCAATAGAAAGAAAGCATGAAGTAACCCAATTTGGAACATCACTTATCTCCCCTTGTCTCGGCCTCT                                        ]
[+] EMBL CA759353             [TTTTTTTTTTTTCACGATCCTTCAACAGAACAACATATGGTCTATCA CCAACCATCTCAATCTGGCACACAGCTTGGGCAGCTTTCATAAATATCAC TGGGTCTCTATATACAACAAACGCCAAGTTCTGGACAAAATTGCGCGGGGTAACCCTTGGATTTGCATGACGATTTGCAGCGGTGACAAGACTGTGGCGTATCTCTAATTCCATTGCTTGCTGAAAAGTGTGGGGATCTTCCAAAATATGACGAATGATTGTAGAAGCCACACTGTTGAATCCAGAAAACAAGCTACTTGGGGGCAAACTTAGCAATGCATGCAGACCACCAGACTCAAGAAAACAAATAGCAGCAGCATGAAGTTTAGTCAACGTGGCACATAACTGAAAAATAGCATGCATGGTAGCAAAAGGCAACTGCTTCTGAATGCATTTACAGCAAATCTTCAAAAGCTGCTTCTGGTCCTCCAAGTCCAATAACCCTGTGCTCGATGAAGCTTCTGAGTCCTTTTTCTTGCTATCATCAATCACCACTGATGTTTGGGGATTTGAATTATCCTTTTTAAGGACATCGAGTTCAGTAACATCTGGCACCTTTGGGTCCAACTGGAGCATCCTATCAATAGAAAGAAAGCATGAAGTAACCCAATTTGGAACATCACTTATCTCCCCTTGTCTCGGCCTCT                                        ]
[+] EMBL CB635033             [ cTTTTTTTTTTCACGATCCTTCAACAGAACAACATATGGTCTATCA CCAACCATCTCAATCTGGCACACAGCTTGGGCAGCTTTCATAAATATCACGTGGGTCTCTATATACAACAAACGCCAAGTTCTGGACAAAATTGCGCGGAGTAACCCTTGGATTTGCATGACAATTTGCAGCGGTGACAAGACTGTGGCGTATCTCTAATTCCATTGCTTGCTGAAGAGTGTGGGGATCTTCCAAAATATGACGAATGATTGTAGAAGCCACACTGTTGAAACCAGAAAACAAGCTACTTGTGGGCAAACTTAGCAATGCATGCAGGCCACCAGACTCAAGAAAACAAATAGCAGCAGCATGAAGTTTAGTCAACGTGGCACATAACTGAAGAATAGCATGCATGGTAGCAAAAGGCAACTGCTTCTGAATGCATTTACAGCAAATCTTCAAAAGTTGCTTCTGGTCCTCCAAGTCCAATAACCCTGTACTCGATGAAGCTTCTGAGTCCTTTTTCTTGCTATCATCAATCACCACTGATGTTTGTGTATTTGAATTATCCTTTTTAAGGACGTCGAGTTCAGTAACATCTGGCAACTTTGGGTCCAACTGGAGCATCCTATCAATAGAAAGAAAGCATGAAGTAACCCAATTTGGAACATCACTTATCTCGCCTTGCCTCGGCTCCAACTCCCAGCTGCACAGCAGGTTCAAAGCAACCTTGACAAG]
[-] EMBL CA766663             [                     TCACCAGACCANCATATGGTCTATCACCCACCCATCTCAATCTGGCACACAGCTTGGGCAGCTTTCATAAATATCAC TGGGTCTCTATATACAACAAACGCCAAGTTCTGGACAAAATTGCGCGGTGTAACCCTTGGATTTGCATGACAATTTGCAGCGGTGACAAGACTGTGGCGTATCTCTAATTCCATTGCTTGCTGAAGAGTGTGGGGATCTTCCAAAATATGACGAATGATTGTAGAAGCCACACTGTTGAATCCAGAAAACAAGCTACTTGTGGGCGAACTTAGCAATGCATGCAGACCACCAGACTCAAGAAAACAAATAGCAGCAGCATGAAGTTTGGTCAACGTGGCACATAACTGAAGAATAGCATGCATGGTAGCAGAAGGCAACTGCTTCTGAATGCATTTACAGCAAATCTTCAAAAGCTGCTTCTGGTCCTCCAAGTCCAATAACCCTGTGCTCGATGAAGCTTCTGAGTCCTTTTTCTTGCTATCATCAATCACCACTGATGTTTGTGTATTTGAATTATCCTTTTTAAGGACATCGAGTTCAGTAACATCTGGCAACTTTGGGTCCAACTGGAGCATCCTATCAATAGAAAGAAAGCATGGAGTAACCCAA TTNGAACATC                                                                  ]


>consensus_7328#0 TTTTTTTTTTTTCACGATCCTTCAACAGAACAACATATGGTCTATCACCAACCATCTCAA TCTGGCACACAGCTTGGGCAGCTTTCATAAATATCACTGGGTCTCTATATACAACAAACG CCAAGTTCTGGACAAAATTGCGCGGGGTAACCCTTGGATTTGCATGACGATTTGCAGCGG TGACAAGACTGTGGCGTATCTCTAATTCCATTGCTTGCTGAAAAGTGTGGGGATCTTCCA AAATATGACGAATGATTGTAGAAGCCACACTGTTGAATCCAGAAAACAAGCTACTTGGGG GCAAACTTAGCAATGCATGCAGACCACCAGACTCAAGAAAACAAATAGCAGCAGCATGAA GTTTAGTCAACGTGGCACATAACTGAAAAATAGCATGCATGGTAGCAAAAGGCAACTGCT TCTGAATGCATTTACAGCAAATCTTCAAAAGCTGCTTCTGGTCCTCCAAGTCCAATAACC CTGTGCTCGATGAAGCTTCTGAGTCCTTTTTCTTGCTATCATCAATCACCACTGATGTTT GGGGATTTGAATTATCCTTTTTAAGGACATCGAGTTCAGTAACATCTGGCACCTTTGGGT CCAACTGGAGCATCCTATCAATAGAAAGAAAGCATGAAGTAACCCAATTTGGAACATCAC TTATCTCCCCTTGTCTCGGCCTCTACTCCCAGCTGCACAGCAGGTTCAAAGCAACCTTGA CAAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)