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Oryza sativa
cluster # 7342 cluster # 7342       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7342#0 length = 1082 sequences # 4  
consensusID : consensus_7342#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1082
fasta sequence 
                              [TGTAGGCTGCTACCTCGCTAGCTCCGTCCGCCGTCGTCCGTCCGCGAGCCACCACCAACCGGCCGGCCGCGCGCGCGCGCC-CATGGACAGTAAGGACAAGGAGAAGGAGCATGAGCAGACCGCGTCGGGCAGGAACCCCGACGTGAACGACGTCGAGGAGGAGGAGGAGGACGAGGAGGGCAACAAGCGCGCCGTCGTGCTCGGCCCCCAGGTCCCCCTCAAGGAGCAGCTCGAGCTCGACAAGGATGATGAGAGCCTGAGGAGGTGGAAGGAGCAACTCCTCGGGCAGGTTGATACTGAACAGCTTGGAGAGACTGCTGAGCCGGAGGTGAAGGTGCTGAACCTGACCATCCTGTCGCCGGATAGGCCGGACCTTGTACTGCCGATCCCGTTCGT-CCCCGACGAGAAGGGCT-ACGCCTTCGC-GCTCAAGGACGGGAGCACTTACAGCTTCCGCTTCAGCTTCATCGTCTCCAACAACATCGTGTCAGGCCTCAAGTACACCAACACTGTCTGGAAGACTGGAGTAAGAGTTGAGAACCAGAAGGTGATGCTGGGGACATTCAGTCCCCAGCTAGAGCCCTACACATATGAGGGTGAAGAGGAGACCACCCCAGCTGGCATGTTCGCAAGAGGTTCCTATTCTGCTAAACTAAAGTTTGTTGATGATGATGGCAAATGCTACTTGGAGATGAGTTACTACTTTGAGATTAGGAAGGAGTGGCCAACCATCCAATGATGTGTGGAACTAAAAAAGGGCTTCAGAAACATGTTAGCTGCTAGCTAAGCCAAGTCAGATGCGCTGTTGCTTCTAGAAATGATTCAATGTGTCGTCATCGTTAAACGCCTTTTAATTTGTTTTGAGCTTGTCACACTTTCTTTTTTCTCTTTTTCTTCCTGTTCTTCGGTCGCATAATGTTTATTCAAACCTATATAATCGATTCTCTATACATGGAGACGCGCTGATATATATTTATGTACTACTGAATTCTGTTGTTTACTTGTTTGCCTGAAACACACCAGCTGATCAATTCCTTTGAGCTAATGATTAATTGTCCTAGACATGCACTTTCAGATCGAAAAAA]

[+] EMBL AK071735             [TGTAGGCTGCTACCTCGCTAGCTCCGTCCGCCGTCGTCCGTCCGCGAGCCACCACCAACCGGCCGGCCGCGCGCGCGCGCC CATGGACAGTAAGGACAAGGAGAAGGAGCATGAGCAGACCGCGTCGGGCAGGAACCCCGACGTGAACGACGTCGAGGAGGAGGAGGAGGACGAGGAGGGCAACAAGCGCGCCGTCGTGCTCGGCCCCCAGGTCCCCCTCAAGGAGCAGCTCGAGCTCGACAAGGATGATGAGAGCCTGAGGAGGTGGAAGGAGCAACTCCTCGGGCAGGTTGATACTGAACAGCTTGGAGAGACTGCTGAGCCGGAGGTGAAGGTGCTGAACCTGACCATCCTGTCGCCGGATAGGCCGGACCTTGTACTGCCGATCCCGTTCGT CCCCGACGAGAAGGGCT ACGCCTTCGC GCTCAAGGACGGGAGCACTTACAGCTTCCGCTTCAGCTTCATCGTCTCCAACAACATCGTGTCAGGCCTCAAGTACACCAACACTGTCTGGAAGACTGGAGTAAGAGTTGAGAACCAGAAGGTGATGCTGGGGACATTCAGTCCCCAGCTAGAGCCCTACACATATGAGGGTGAAGAGGAGACCACCCCAGCTGGCATGTTCGCAAGAGGTTCCTATTCTGCTAAACTAAAGTTTGTTGATGATGATGGCAAATGCTACTTGGAGATGAGTTACTACTTTGAGATTAGGAAGGAGTGGCCAACCATCCAATGATGTGTGGAACTAAAAAAGGGCTTCAGAAACATGTTAGCTGCTAGCTAAGCCAAGTCAGATGCGCTGTTGCTTCTAGAAATGATTCAATGTGTCGTCATCGTTAAACGCCTTTTAATTTGTTTTGAGCTTGTCACACTTTCTTTTTTCTCTTTTTCTTCCTGTTCTTCGGTCGCATAATGTTTATTCAAACCTATATAATCGATTCTCTATACATGGAGACGCGCTGATATATATTTATGTACTACTGAATTCTGTTGTTTACTTGTTTGCCTGAAACACACCAGCTGATCAATTCCTTTGAGCTAATGATTAATTGTCCTAGACATGCAC                ]
[+] EMBL C72298               [     GCTGCTACCTCGCTAGCTCCGTCCGCCGTCGTCCGTCCGCGAGCCACCACCAACCGGCCGGCCGCGCGCGCG GCCNCATGGACAGTAAGGACAAGGAGAAGGAGCATGAGCAGACCGCGTCGGGCAGGAACCCCGACGTGAACGACGTCGAGGAGGAGGAGGAGGACGAGGAGGGCAACAAGCGCGCCGTCGTGCTCGGCCCCCAGGTCCCCCTCAAGGAGCAGCTCGAGCTCGACAAGGATGATGAGAGCCTGAGGAGGTGGAAGGAGCAACTCCTCGGGCAGGTTGATACTGAACAGCTTGGAGAGACTNCTGAGCCGGAGGTGAAGGTGCTGAACCTGACCATCCTGTCGCCGGATAGGCCGGACCTTGTACTGCCGATCCCGTTCGT NCCCGACGAGAAGGGCTNACGCTTTCGG GTTCAAGGACGGGAGCACTTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA766486             [                                                                                                                                                                                  GGGCAACAAGCGCGCCGTCGTGCTCGGCCCCCAGGTCCCCCTCAAGGAGCAGCTCGAGCTCGACAAGGATGATGAGAGCCTGAGGAGGTGGAAGGAGCAACTCCTCGGGCAGGTTGATACTGAACAGCTTGGAGAGACTGCTGAGCCGGAGGTGAAGGTGCTGAACCTGACCATCCTGTCGCCGGATAGGCCGGACCTTGTGCTGTCGATCCCGTTCGT CCCCGACGAGAAGGGCT ACGCCTTNGN GCTCAAGGACGGCANCNCTTACAGCTTCCGCTTCAGCTTCATCGTCTCCAACAACATCGTGTCAGGCCTCAAGNACANCAACACTGTCTGGAAGACTGGAGTAAGAGTTGAGAACCAGAAGGTGATGCTGGGGACATTCAGTCCCCAGCTAGAGCCCTACACATATGAGGGTGAAGAGGAGACCACCCCAGCTGGCATGTTCGCAAGAGGTTCCTATTCTGCTAAACTAAAGTTTGTTGATGATGATGGCAAATGCTACTTGGAGATGAGTTACTACTTTGAGATTAGGAAGGAATGGCCAACCATCCAATGATGTGTGGAACTAAAAAAGGGCTTCAGAAACATGTTAGCTGCTAGCTAAGCCAAGTCAGATGCGCTGNTGCTTCTANAAATGAT                                                                                                                                                                                                                                                                       ]
[+] EMBL AU093946             [                                                                                                                                                                                                                                                                                                                                                                                                     CCGTTCGTCCCCCGACGAGAAAGGGT ACGCNTTCGCGGCTCAAGGACGGGAGCACTTACAGCTTCCGCTTCAGCTTCATCGTCTCCAACAACATCGTGTCAGGCCTCAAGTACACCAACACTGTCTGGAAGACTGGAGTAAGAGTTGAGAACCAGAAGGTGATGCTGGGGACATTCAGTCCCCAGCTAGAGCCCTACACATATGAGGGTGAAGAGGAGACCACCCCAGCTGGCATGTTCGCAAGAGGTTCCTATTCTGCTAAACTAAAGTTTGTTGATGATGATGGCAAATGCTACTTGGAGATGAGTTACTACTTTGAGATTAGGAAGGAGTGGCCAACCATCCAATGATGTGTGGAACTAAAAAAGGGCTTCAGAAACATGTTAGCTGCTAGCTAAGCCAAGTCAGATGCGCTGTTGCTTCTAGAAATGATTCAATGTGTCGTCATCGTTAAACGCCTTTTAATTTGTTTTGAGCTTGTCACACTTTCTTTTTTCTCTTTTTCTTCCTGTTCTTCGGTCGCATAATGTTTATTCAAACCTATATAATCGATTCTCTATACATGGAGACGCGCTGATATATATTTATGTACTACTGAATTCTGTTGTTTACTTGTTTGCCTGAAACACACCAGCTGATCAATTCCTTTGAGCTAATGATTAATTGTCCTAGACATGCACTTTCAGATCGAAAAAA]




>consensus_7342#0
TGTAGGCTGCTACCTCGCTAGCTCCGTCCGCCGTCGTCCGTCCGCGAGCCACCACCAACC
GGCCGGCCGCGCGCGCGCGCCCATGGACAGTAAGGACAAGGAGAAGGAGCATGAGCAGAC
CGCGTCGGGCAGGAACCCCGACGTGAACGACGTCGAGGAGGAGGAGGAGGACGAGGAGGG
CAACAAGCGCGCCGTCGTGCTCGGCCCCCAGGTCCCCCTCAAGGAGCAGCTCGAGCTCGA
CAAGGATGATGAGAGCCTGAGGAGGTGGAAGGAGCAACTCCTCGGGCAGGTTGATACTGA
ACAGCTTGGAGAGACTGCTGAGCCGGAGGTGAAGGTGCTGAACCTGACCATCCTGTCGCC
GGATAGGCCGGACCTTGTACTGCCGATCCCGTTCGTCCCCGACGAGAAGGGCTACGCCTT
CGCGCTCAAGGACGGGAGCACTTACAGCTTCCGCTTCAGCTTCATCGTCTCCAACAACAT
CGTGTCAGGCCTCAAGTACACCAACACTGTCTGGAAGACTGGAGTAAGAGTTGAGAACCA
GAAGGTGATGCTGGGGACATTCAGTCCCCAGCTAGAGCCCTACACATATGAGGGTGAAGA
GGAGACCACCCCAGCTGGCATGTTCGCAAGAGGTTCCTATTCTGCTAAACTAAAGTTTGT
TGATGATGATGGCAAATGCTACTTGGAGATGAGTTACTACTTTGAGATTAGGAAGGAGTG
GCCAACCATCCAATGATGTGTGGAACTAAAAAAGGGCTTCAGAAACATGTTAGCTGCTAG
CTAAGCCAAGTCAGATGCGCTGTTGCTTCTAGAAATGATTCAATGTGTCGTCATCGTTAA
ACGCCTTTTAATTTGTTTTGAGCTTGTCACACTTTCTTTTTTCTCTTTTTCTTCCTGTTC
TTCGGTCGCATAATGTTTATTCAAACCTATATAATCGATTCTCTATACATGGAGACGCGC
TGATATATATTTATGTACTACTGAATTCTGTTGTTTACTTGTTTGCCTGAAACACACCAG
CTGATCAATTCCTTTGAGCTAATGATTAATTGTCCTAGACATGCACTTTCAGATCGAAAA
AA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)