These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7345#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3397 fasta sequence [TAGATCGTACCCGAGTTCGTCCACCGCCATCGCCATTGGTGCCGTCCGCCCATCCCCATGCTCGGCCGTCATCCCCAACTGCCACAAGCTCTATTAGTGAAGCAATTCTATTGGTCATCCACAAGCTCAGCCTCACTGAGAGCTCGTCCGACATAGCGCACTAGTCGCGTGGTCCACACGGTGGCGGCGATCCTGCGCGGCGATAGCTGAGTTCCTCCGACATGTGCACCAGGAACCGTCCCCTCTTATGTGGCAGGACCACGGGTGTGCGACGAGGTTGGCTGACCGGAGCTGGAGGTGACGACGAGGAATGGCGAGGGACGGAGGACGCGGCAACTGATGGATAGACGGTGCTGCTTCGGATGGACGGAGTGGCGTGAAATGAAGAAATTAGCTCTTGTGATGGTGGATTCTGAAAGACATGCGAATTGGATGGTTAATCCTGAACGTGCTACGAATCGGATGGAATATTCTGAAATTTCTCGTCTGCATGTCCCCAACCCTAGGTCGCCGTTTCCACACACGAGATCGAGCGGCTCGCCATCTCTGCCGCCGCCTCGCTCGCTCGCTCGCCGTCCTCCGCCGCTGCCTTGCTCGTCGTCCTCCGCCGCCGCGGCGCCGGCACGCCTCGTCTATCCCCTCTCTCGGCTCAGTACTTTGGTTTTCTCCCATGTCGACATCATTAGCTGAAGTTCCGCAAGGAGGACATATCAAAGAGGTCATTGCAGAGGGCTCTTCGGGAGGCCTATCATCGTCAACACAGTTATTGGCTACAAAACGAAAGTTAGCAGCATCGAATCCTCCAACAGCAAAGCGAAGACGATCACCTATTGCATTGCCAATAGTCAGGTCTCCAGGAGTGCGACAAATTATTTCCCAAAATGAAGTCATCATGGAGAGATCACAAGTTGCTGGTCAGATGTCCCCAAGTGCAGAGTCTCCAAGAGCTAGATCTATGTCTCCAGTGGCAAGGTTCGTATCAAGTCCGTCTGCTATCCCAATTGAGCTGGATGTTGAAACTCAGCCAAGGGAGTCAACTCAATCAACACCTCATGTTGTGACTCATCGTTCTGGGAAAAGAACACTCAAATCTTTAATCTGGAAAGAATTTAAACCATTTTATTCTTCTACTGGAAAGGTGCTCTATGGGAAATGCATTCATTGCAGTAAGGTAATTAAAGCTAACCGTGGTTCGGGGACAAGTCAATGCCATAGACATTTACTTAAGTGTCCACTGAGAATTAGAGTGCAACAATTGGTTGAAAGTTTGCATTCCAGTCTATCTCCTAATGCATCTGTTCTAAAGGACTGGAAATTTGATCCTGATGTAGCACGTGCAGAACTTTTAAGGATGCTTGTTTTGCAAGAACTTCCTTTCAGTTTTGTTGAACACCCTGGTTTTAGAAGATTTTGTGCAAGCTTGAACCCGTACTTTAGGGTGCTTTCCAGAATTACTATAAAGGGTGATTGCTTGGCTGCCTATCAAGAACAAAAGTTAGCTTTGTTTGAGGTACTGAGGAAAACAAATTCTCGGGTTTCACTGGCGGCTGACATGTGGTCATCTAATCAAAACCTAGGTTACATGTGTATAACTTGTCACTTCATTGACAATGAATGGAATATTCAAAAGAGGATCATAAGATTCACTCAAGTGCGTACCCACATGATAGTATAGCTCTCTTCAATGAAATTCTAAAGTGTATTCAGGATTGGCAGATAGAAAGTAAGTTGTTCAGTATTACAGTAGACAATGCATCTGTTAATGATTCTATGGTTGTGGAATTGAAAGGAAATCTCTTGGGTAAGCTTGCCATGCCTTGCAAAGGGGAGCTATTTCATTTCCGGTGCGCAGCTCACATCCTTAATCTTATTGTTCAAGATGGATTGAGTACTATCAGTGGTGCCATATCTAGGATAAGGGAAAGTGTAAAGTATATAAAAGCATCAGAAGCATGTGAGCAAAAATTTGAAGAAATCATTGCACAAGTCGGAATTGTTGAAGAGAAGCGTCCTTCACTTGATGTGTCCACTCGTTGGAATTCCACCTATTTGATGCTTTCCTCATCCTTATTATTCAGGAGGGCTTTTGATTCATTGGATCGGTTTGATCCAAACTTTCAAGATGCTCCACTATTTTTTGATTGGGACAATGCAGAAGTTCTTTGCAAACATCTCAAGATCTTCTATGATGCAACTGTTGTGGTTTCCGGGACATCATATCCCACTGTTTCTCGCTACTTTCATGAATTTTGGAAAGTGAAGGTGATGCTTCTAAATGAGTCCAACAGTGAGGATGTTCTTGTCGCTAGCATGGTTTCTAAAATGGATACAAAATTTCAGAAATATTGGGATCTGCAGTTCCTGCAGATTTGTGTTCCTGTTATTTTTTATCCCAGATTTAAGTTGAAATTCCTTGAGTTTAGGCTGAAAGCAGGTTTTGGAGATAAGGCAACTGGTCCAAATGGATATCTGTCTAGAATTAAGAGGATAGTCCGCAGTTGGTTTGTTGAATATTCTTCACAAATTGGTGGTCCAAGCGCAATCAATTCTCAAGAAGCATCAACTAGTGGAGTGAATGTTGGTGGCAGCCAATTTGCTGACTGGAGGCAATATCTTCATGATCAAAGCAAGAGTAAAGAAAGACTGAGTTAACTAGCTATCTCGAAGATATTCCTCAAGAAAATGATTTCCCTGATGATGATTTTGACATACTCCAGTGGTGGAGGGTAAACTCATGCAAATATCCAATATTATCACGCATGGCGCTTGATTTGCTTGCTGTCCCTGCATCTTCAGTTGCATCAGATTCTGCATTTTCTACTGGATCTAGAATCATTAGTGACTATAGGAGTAGGCTGGCTAATGGAACTGTGGTGGCATTGGTTTGCCTTCAAGATTAGATGCGAGCAGATGGTTTTGGTGATCCCTATTCAATTCTAACTGATACGGTTGAGGACGATGATGTTAATATGCAACTATTAGGAAGTAATGCAGGAGCGTGCTCTGGTGGTGGGGGCAAAACTCAATGAAATTTTCCTTTCTGGAATGTTATATTCTAACTGCAAGGGATGAGATGGCCTTCAGCAGCTGCGAATGCTGCTACCACTAGTTTTGTTCCCTGTAGTTTTTATTTCAGTAACTTAGTTCGTTTAGATGCACTAGCCGTTGTCATTTTTGTGCATGTCCAGAGCCTGCTGAAAATAGTATGATGTATTGGAAATTCAGTTGAGCCTGGGATTTCTGGACTTTTTGTTCTGCCGTTTTGCTGCTGCTGCTACCGTTCTGGCCTCCTGCTGCTGGGCTAGTGCTGCTGCTGGTTGAAATCCTCACTGTGAGAAGGACATCAATTTTTGGTTGTATTTTGCAGTGTTGATATGAATTGTTCAGATACAAGCCT] [+] EMBL AK068849 [TAGATCGTACCCGAGTTCGTCCACCGCCATCGCCATTGGTGCCGTCCGCCCATCCCCATGCTCGGCCGTCATCCCCAACTGCCACAAGCTCTATTAGTGAAGCAATTCTATTGGTCATCCACAAGCTCAGCCTCACTGAGAGCTCGTCCGACATAGCGCACTAGTCGCGTGGTCCACACGGTGGCGGCGATCCTGCGCGGCGATAGCTGAGTTCCTCCGACATGTGCACCAGGAACCGTCCCCTCTTATGTGGCAGGACCACGGGTGTGCGACGAGGTTGGCTGACCGGAGCTGGAGGTGACGACGAGGAATGGCGAGGGACGGAGGACGCGGCAACTGATGGATAGACGGTGCTGCTTCGGATGGACGGAGTGGCGTGAAATGAAGAAATTAGCTCTTGTGATGGTGGATTCTGAAAGACATGCGAATTGGATGGTTAATCCTGAACGTGCTACGAATCGGATGGAATATTCTGAAATTTCTCGTCTGCATGTCCCCAACCCTAGGTCGCCGTTTCCACACACGAGATCGAGCGGCTCGCCATCTCTGCCGCCGCCTCGCTCGCTCGCTCGCCGTCCTCCGCCGCTGCCTTGCTCGTCGTCCTCCGCCGCCGCGGCGCCGGCACGCCTCGTCTATCCCCTCTCTCGGCTCAGTACTTTGGTTTTCTCCCATGTCGACATCATTAGCTGAAGTTCCGCAAGGAGGACATATCAAAGAGGTCATTGCAGAGGGCTCTTCGGGAGGCCTATCATCGTCAACACAGTTATTGGCTACAAAACGAAAGTTAGCAGCATCGAATCCTCCAACAGCAAAGCGAAGACGATCACCTATTGCATTGCCAATAGTCAGGTCTCCAGGAGTGCGACAAATTATTTCCCAAAATGAAGTCATCATGGAGAGATCACAAGTTGCTGGTCAGATGTCCCCAAGTGCAGAGTCTCCAAGAGCTAGATCTATGTCTCCAGTGGCAAGGTTCGTATCAAGTCCGTCTGCTATCCCAATTGAGCTGGATGTTGAAACTCAGCCAAGGGAGTCAACTCAATCAACACCTCATGTTGTGACTCATCGTTCTGGGAAAAGAACACTCAAATCTTTAATCTGGAAAGAATTTAAACCATTTTATTCTTCTACTGGAAAGGTGCTCTATGGGAAATGCATTCATTGCAGTAAGGTAATTAAAGCTAACCGTGGTTCGGGGACAAGTCAATGCCATAGACATTTACTTAAGTGTCCACTGAGAATTAGAGTGCAACAATTGGTTGAAAGTTTGCATTCCAGTCTATCTCCTAATGCATCTGTTCTAAAGGACTGGAAATTTGATCCTGATGTAGCACGTGCAGAACTTTTAAGGATGCTTGTTTTGCAAGAACTTCCTTTCAGTTTTGTTGAACACCCTGGTTTTAGAAGATTTTGTGCAAGCTTGAACCCGTACTTTAGGGTGCTTTCCAGAATTACTATAAAGGGTGATTGCTTGGCTGCCTATCAAGAACAAAAGTTAGCTTTGTTTGAGGTACTGAGGAAAACAAATTCTCGGGTTTCACTGGCGGCTGACATGTGGTCATCTAATCAAAACCTAGGTTACATGTGTATAACTTGTCACTTCATTGACAATGAATGGAATATTCAAAAGAGGATCATAAGATTCACTCAAGTGCGTACCCACATGATAGTATAGCTCTCTTCAATGAAATTCTAAAGTGTATTCAGGATTGGCAGATAGAAAGTAAGTTGTTCAGTATTACAGTAGACAATGCATCTGTTAATGATTCTATGGTTGTGGAATTGAAAGGAAATCTCTTGGGTAAGCTTGCCATGCCTTGCAAAGGGGAGCTATTTCATTTCCGGTGCGCAGCTCACATCCTTAATCTTATTGTTCAAGATGGATTGAGTACTATCAGTGGTGCCATATCTAGGATAAGGGAAAGTGTAAAGTATATAAAAGCATCAGAAGCATGTGAGCAAAAATTTGAAGAAATCATTGCACAAGTCGGAATTGTTGAAGAGAAGCGTCCTTCACTTGATGTGTCCACTCGTTGGAATTCCACCTATTTGATGCTTTCCTCATCCTTATTATTCAGGAGGGCTTTTGATTCATTGGATCGGTTTGATCCAAACTTTCAAGATGCTCCACTATTTTTTGATTGGGACAATGCAGAAGTTCTTTGCAAACATCTCAAGATCTTCTATGATGCAACTGTTGTGGTTTCCGGGACATCATATCCCACTGTTTCTCGCTACTTTCATGAATTTTGGAAAGTGAAGGTGATGCTTCTAAATGAGTCCAACAGTGAGGATGTTCTTGTCGCTAGCATGGTTTCTAAAATGGATACAAAATTTCAGAAATATTGGGATCTGCAGTTCCTGCAGATTTGTGTTCCTGTTATTTTTTATCCCAGATTTAAGTTGAAATTCCTTGAGTTTAGGCTGAAAGCAGGTTTTGGAGATAAGGCAACTGGTCCAAATGGATATCTGTCTAGAATTAAGAGGATAGTCCGCAGTTGGTTTGTTGAATATTCTTCACAAATTGGTGGTCCAAGCGCAATCAATTCTCAAGAAGCATCAACTAGTGGAGTGAATGTTGGTGGCAGCCAATTTGCTGACTGGAGGCAATATCTTCATGATCAAAGCAAGAGTAAAGAAAGACTGAGTTAACTAGCTATCTCGAAGATATTCCTCAAGAAAATGATTTCCCTGATGATGATTTTGACATACTCCAGTGGTGGAGGGTAAACTCATGCAAATATCCAATATTATCACGCATGGCGCTTGATTTGCTTGCTGTCCCTGCATCTTCAGTTGCATCAGATTCTGCATTTTCTACTGGATCTAGAATCATTAGTGACTATAGGAGTAGGCTGGCTAATGGAACTGTGGTGGCATTGGTTTGCCTTCAAGATTAGATGCGAGCAGATGGTTTTGGTGATCCCTATTCAATTCTAACTGATACGGTTGAGGACGATGATGTTAATATGCAACTATTAGGAAGTAATGCAGGAGCGTGCTCTGGTGGTGGGGGCAAAACTCAATGAAATTTTCCTTTCTGGAATGTTATATTCTAACTGCAAGGGATGAGATGGCCTTCAGCAGCTGCGAATGCTGCTACCACTAGTTTTGTTCCCTGTAGTTTTTATTTCAGTAACTTAGTTCGTTTAGATGCACTAGCCGTTGTCATTTTTGTGCATGTCCAGAGCCTGCTGAAAATAGTATGATGTATTGGAAATTCAGTTGAGCCTGGGATTTCTGGACTTTTTGTTCTGCCGTTTTGCTGCTGCTGCTACCGTTCTGGCCTCCTGCTGCTGGGCTAGTGCTGCTGCTGGTTGAAATCCTCACTGTGAGAAGGACATCAATTTTTGGTTGTATTTTGCAGTGTTGATATGAATTGTTCAGATACAAGCCT] consensusID : consensus_7345#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2852 fasta sequence [ATCGAGCCTGGAGCGGCTCGCCATCTCTGCCGCCGGTCCGCCGCCTCGCTCGCTCGCTCGCCGTCCGCCGCCTCGCTCGCTCGCTCGCCGTCCGCCGCCGCCGCCTTGCTCAGTTGCTCGTCGTCCTCCGCCGCCGCGGCGCCAGCACGCCTCGTCCTTCCCCTCTCTCGGCTCAGTACTTTGGTTTTCTCCCATGTCGACATCATTAGCTGAAGCTTCGCAAGGAGGATATATCAAAGAGGTCATTGCAGAGGGCTCTTCGGGAGGCTTATCATCATCAACACAATTGTTGTCTGCAAAACGAAAGTTAGCAGCATCGAATCCTTCGACAGCGAAGCGAAGACGATCACCTATTGTATTGCCAATAGTCAGGTCTCCAGGAGTGCGCCAAATTATTTCTCAAAATGCTCTCATCATGGAGAGATCACAAGTTCCTGGTCATATGTCCCCAAGTGCAGAGTCTCCAAGAGCTAGATCTCTGTCTCCAGTGGCAAGGTTCGTATCAAGTCCGTCTACTATCCTTGAGCTGGATGTTGAAAATCAGCCAAGGGAATCAAGTCAACCAACACCTCATGTTGTGACTCATCGTTCTGGTTAGCACCTAATACATTTGTTCTAAAGGACTGGAAATTTGATCCTGATGTAGCACGTGCAGAACTTTTAAGGATGATTGTTTTGCAAGAACTTCCTTCCAGCTTTGTTGAACACCTTGGTTTTAGAAGATTTTGTGCAAGCTTGAACCCGTACTTTAGGGTGGTTTCTAGAACTACTATAAAGGGTGATTGCTTGGCTGCCTATCAAGAACAAAAGTTAGCTTTGCTTGAGGTACTGAGGAAAACAAATTCTCGGGTTTCACTGACGGCTGACATGTGGTCATCTAATCAAAACCTAGGTTACATGTGCATAACTTGTCACTTCATTGACAATGAATGGAATATGCAAAAGAGGATCATAAGATTCACTCAAGTGCGTACCCCACATGATAGTATAGCTCTCTTCAATGAAATTATAAAGTGCATTCAAGATTGGCAGATAGAAAGTAAGTTGTTCAGTATTACAGTAGACAATGCATCTACTAATGATTCTATGGTTGTGGAATTGAAAGGAAATCTCTTGGGTAAACTTGCTATGCCTTGCAAAGGAGAGCTATTTCATTTCTGGTGCGCAGCTCACATCTTTAATCCTATTGTTCAAGATGGATTGAGTACTATCAGTGCTGCCATATCCAGGATAAGGGAAAGTGTGAAGTATGTAAGAGCATCAGAAGCACGGGAGCAAAAATTTGAAGAAATCATTGCACAAGTCGGAATTGTTGAAGAGAAGCGTCCTTCACTTGATGTCTCCACTCGTTGGAATTCCACCTATTTGATGCTTTCCTCATCCTTATTATTCAGGAGGGCTTTTGATTCATTGGATCGGTTTGATCCTAACTTTAAAGATGCTCCACAATTTTTCGATTGGGAGAATGCAGAAGTTCTTTGCAAACATCTCAAGGTCTTCTATGATGCAACTGTTGTGGTTTCCGGGACATCATATCCCACTGTTACTCGCTACTTTCATGAATTTTGGAAAGTGAAGGTGATGATTCTAAATGAGTCCAACAATGAGGATGATCTTGTTGCTAGCTTGGTTTCTAAAATGGATACAAAATTTCAGAAATATTGGGATCTACAGTTCCTGCAGATTTGGGTTCCTGTTATTTTTGATCCCAGATTTAAGTTGAAATTCCTTGAGTTTAGGCTGAAAGCAGGTTTTGGAGATAAGGCAACTGGTCCAAATGGATATCTCCCTAGAATTAAGAGGACAGTCCGTACTTGGTTTGCTGAATATTCTTCACAAATTTGTGGTCCAAGCACAACCAATTCTCAAGAAGCATCAACTAGTGGGGTGAATGTTGGTGGCAGCCAATTTGCTGACTAGAGGCAATATCTTCATGATCAAAGCAAGAGTAAAGTAAAGACTGAGTTAACTAGATATCTCGAAGATATTCCTCAAGAAAATGATTTCCCTGATGATGATTTTGACATACTCTAGTGGTGGAGGGTGAACTCTTGCAAATATCCAATATCATCACGCATGGCACTTGATTTGCTTGCTGTCCCTGCATCCTCAGTTGCATCAGAGTCTGCATTTTCTACTGGATAAAGAATCATTAGCGACTATAGGAGTAGGTTGGCTAGTGGAACTGTGGAGGCATTGGTTTGCCTTCAAGATTGGATGCGAGCCGATGGTTTTGGTGATCCATATTCAATTCAAACTGATACGGCTGAGGGCGATGATGTTAATATGCAACTATTGGGACATTAAATCATTTGACATCTCAGGCAAATTACCATGTGAGTTCTATGCAATCTGGGTTCTGAGAAATTTTGCTAGTTCTGGAGCAGTGGTAAGTGGAGCTTGCTTTGTTTCCCAGCTCATAT-CAGTGTTTCCCA-CACATGTCAGATTACATCCAAAATTTGTACGATGTATTGGAAATTTAGTTGAGCCTGGGATTTCTGGACTTCTTTTCTGCCGTTGAGCCTGAAATTCATATTTGATTTTGCCTGGTGAATTCTGCATGAGTGACAGGAATAGATGCAAGGATTAGGCGGCTTTGTTGCTGTCAGGATATGCATGTCTTTTGAGTCCCTTTTTTTTTTCCCC-TTTATGCTGTTGTTAAGCTATGAATATTTTGGAAGGGGATTTTTTTAGAACAATTTGATTAAGGATCGGTGGATTTTTATGCCAAATTGTAGACTCTGCTTTTCGCTGCAGTCACTGTCTTTCAGAAGATTTCAGGGCCCAAGATGGTTNCTAATATTTACTGATTTTCTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK101882 [ATCGAGCCTGGAGCGGCTCGCCATCTCTGCCGCCGGTCCGCCGCCTCGCTCGCTCGCTCGCCGTCCGCCGCCTCGCTCGCTCGCTCGCCGTCCGCCGCCGCCGCCTTGCTCAGTTGCTCGTCGTCCTCCGCCGCCGCGGCGCCAGCACGCCTCGTCCTTCCCCTCTCTCGGCTCAGTACTTTGGTTTTCTCCCATGTCGACATCATTAGCTGAAGCTTCGCAAGGAGGATATATCAAAGAGGTCATTGCAGAGGGCTCTTCGGGAGGCTTATCATCATCAACACAATTGTTGTCTGCAAAACGAAAGTTAGCAGCATCGAATCCTTCGACAGCGAAGCGAAGACGATCACCTATTGTATTGCCAATAGTCAGGTCTCCAGGAGTGCGCCAAATTATTTCTCAAAATGCTCTCATCATGGAGAGATCACAAGTTCCTGGTCATATGTCCCCAAGTGCAGAGTCTCCAAGAGCTAGATCTCTGTCTCCAGTGGCAAGGTTCGTATCAAGTCCGTCTACTATCCTTGAGCTGGATGTTGAAAATCAGCCAAGGGAATCAAGTCAACCAACACCTCATGTTGTGACTCATCGTTCTGGTTAGCACCTAATACATTTGTTCTAAAGGACTGGAAATTTGATCCTGATGTAGCACGTGCAGAACTTTTAAGGATGATTGTTTTGCAAGAACTTCCTTCCAGCTTTGTTGAACACCTTGGTTTTAGAAGATTTTGTGCAAGCTTGAACCCGTACTTTAGGGTGGTTTCTAGAACTACTATAAAGGGTGATTGCTTGGCTGCCTATCAAGAACAAAAGTTAGCTTTGCTTGAGGTACTGAGGAAAACAAATTCTCGGGTTTCACTGACGGCTGACATGTGGTCATCTAATCAAAACCTAGGTTACATGTGCATAACTTGTCACTTCATTGACAATGAATGGAATATGCAAAAGAGGATCATAAGATTCACTCAAGTGCGTACCCCACATGATAGTATAGCTCTCTTCAATGAAATTATAAAGTGCATTCAAGATTGGCAGATAGAAAGTAAGTTGTTCAGTATTACAGTAGACAATGCATCTACTAATGATTCTATGGTTGTGGAATTGAAAGGAAATCTCTTGGGTAAACTTGCTATGCCTTGCAAAGGAGAGCTATTTCATTTCTGGTGCGCAGCTCACATCTTTAATCCTATTGTTCAAGATGGATTGAGTACTATCAGTGCTGCCATATCCAGGATAAGGGAAAGTGTGAAGTATGTAAGAGCATCAGAAGCACGGGAGCAAAAATTTGAAGAAATCATTGCACAAGTCGGAATTGTTGAAGAGAAGCGTCCTTCACTTGATGTCTCCACTCGTTGGAATTCCACCTATTTGATGCTTTCCTCATCCTTATTATTCAGGAGGGCTTTTGATTCATTGGATCGGTTTGATCCTAACTTTAAAGATGCTCCACAATTTTTCGATTGGGAGAATGCAGAAGTTCTTTGCAAACATCTCAAGGTCTTCTATGATGCAACTGTTGTGGTTTCCGGGACATCATATCCCACTGTTACTCGCTACTTTCATGAATTTTGGAAAGTGAAGGTGATGATTCTAAATGAGTCCAACAATGAGGATGATCTTGTTGCTAGCTTGGTTTCTAAAATGGATACAAAATTTCAGAAATATTGGGATCTACAGTTCCTGCAGATTTGGGTTCCTGTTATTTTTGATCCCAGATTTAAGTTGAAATTCCTTGAGTTTAGGCTGAAAGCAGGTTTTGGAGATAAGGCAACTGGTCCAAATGGATATCTCCCTAGAATTAAGAGGACAGTCCGTACTTGGTTTGCTGAATATTCTTCACAAATTTGTGGTCCAAGCACAACCAATTCTCAAGAAGCATCAACTAGTGGGGTGAATGTTGGTGGCAGCCAATTTGCTGACTAGAGGCAATATCTTCATGATCAAAGCAAGAGTAAAGTAAAGACTGAGTTAACTAGATATCTCGAAGATATTCCTCAAGAAAATGATTTCCCTGATGATGATTTTGACATACTCTAGTGGTGGAGGGTGAACTCTTGCAAATATCCAATATCATCACGCATGGCACTTGATTTGCTTGCTGTCCCTGCATCCTCAGTTGCATCAGAGTCTGCATTTTCTACTGGATAAAGAATCATTAGCGACTATAGGAGTAGGTTGGCTAGTGGAACTGTGGAGGCATTGGTTTGCCTTCAAGATTGGATGCGAGCCGATGGTTTTGGTGATCCATATTCAATTCAAACTGATACGGCTGAGGGCGATGATGTTAATATGCAACTATTGGGACATTAAATCATTTGACATCTCAGGCAAATTACCATGTGAGTTCTATGCAATCTGGGTTCTGAGAAATTTTGCTAGTTCTGGAGCAGTGGTAAGTGGAGCTTGCTTTGTTTCCCAGCTCATAT CAGTGTTTCCCA CGCATGTCAGATTACATCCAAAATTTGTACGATGTATTGGAAATTTAGTTGAGCCTGGGATTTCTGGACTTCTTTTCTGCCGTTGAGCCTGAAATTCATATTTGATTTTGCCTGGTGAATTCTGCATGAGTGACAGGAATAGATGCAAGGATTAGGCGGCTTTGTTGCTGTCAGGATATGCATGTCTTTTGAGT CCGTTTTTTTTTCCCC TTTATGCTGTTGTTAAGCTATGAATATTTTGGAAGGGGATTTTTTTAGAACAATTTGATTAAGGATCGGTGGATTTTTATGCCAAATTGTAGACTCTGCTTTTCGCTGCAGTCAC ] [+] EMBL C73679 [ GCAACTATTGGGACATTAAATCATTTGACATCTCAGGCAAATTACCATGTGAGTTCTATGCAATCTGGGTTCTGAGAAATTTTGCTAGTTCTGGAGCAGTGGTAAGTGGAGCTTGCTTTGTTTCCCAGCTCATAT CAGTGTTTCCCA CACATGTCAGATTACATCCAAAATTTGTACGATGTATTGGAAATTTAGTTGAGCCTGGGATTTCTGGACTTCTTTTCTGCCGTTGAGCCTGAAATTCATATTTGATTTTGCCTGGTGAATTCTGCATGAGTGACAGGAATAGATGCAAGGATTAGGCGGCTTTGTTGCTGTCAGGATATGCATGTCTTTTGAGTCCCTTTTTTTTTTCCCCTTTTATGCTGTTGTTAAGCTATGAATATTTTGGAAGGGGA TTTTTTAGACCAATTTGATTAAGGACCGGTGGA TTTTATGCC ] [+] EMBL AU091918 [ CAGCTCATATCCAGTGTTCCCCACCACATGTCAGATTACATCCAAAATTTGTACGATGTATTGGAAATTTAGTTGAGCCTGGGATTTCTGGACTTCTTTTCTGCCGTTGAGCCTGAAATTCATATTTGATTTTGCCTGGTGAATTCTGCATGAGTGACAGGAATAGATGCAAGGATTAGGCGGCTTTGTTGCTGTCAGGATATGCATGTCTTTTGAGTCCCTTTTTTTTTTCCCC TTTATGCTGTTGTTAAGCTATGAATATTTTGGAAGGGGATTTTTTTAGAACAATTTGATTAAGGATCGGTGGATTTTTATGCCAAATTGTAGACTCTGCTTTTCGCTGCAGTCACTGTCTTTCAGAAGATTTCAGGGCCCAAGATGGTTNCTAATATTTACTGATTTTCTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7345#0 TAGATCGTACCCGAGTTCGTCCACCGCCATCGCCATTGGTGCCGTCCGCCCATCCCCATG 60 consensus_7345#1 ------------------------------------------------------------ consensus_7345#0 CTCGGCCGTCATCCCCAACTGCCACAAGCTCTATTAGTGAAGCAATTCTATTGGTCATCC 120 consensus_7345#1 ------------------------------------------------------------ consensus_7345#0 ACAAGCTCAGCCTCACTGAGAGCTCGTCCGACATAGCGCACTAGTCGCGTGGTCCACACG 180 consensus_7345#1 ------------------------------------------------------------ consensus_7345#0 GTGGCGGCGATCCTGCGCGGCGATAGCTGAGTTCCTCCGACATGTGCACCAGGAACCGTC 240 consensus_7345#1 ------------------------------------------------------------ consensus_7345#0 CCCTCTTATGTGGCAGGACCACGGGTGTGCGACGAGGTTGGCTGACCGGAGCTGGAGGTG 300 consensus_7345#1 ------------------------------------------------------------ consensus_7345#0 ACGACGAGGAATGGCGAGGGACGGAGGACGCGGCAACTGATGGATAGACGGTGCTGCTTC 360 consensus_7345#1 ------------------------------------------------------------ consensus_7345#0 GGATGGACGGAGTGGCGTGAAATGAAGAAATTAGCTCTTGTGATGGTGGATTCTGAAAGA 420 consensus_7345#1 ------------------------------------------------------------ consensus_7345#0 CATGCGAATTGGATGGTTAATCCTGAACGTGCTACGAATCGGATGGAATATTCTGAAATT 480 consensus_7345#1 ------------------------------------------ATCGAGC---CTGGAGCG 15 ** ** *** * consensus_7345#0 TCTCGTCTGCATGTCCCCAACCCTAGGTCGCCGTTTCCACACACGAGATCGAGCGGCTCG 540 consensus_7345#1 GCTCGCC-----ATCTCTGCCGCCGGTCCGCCGCCTC---------GCTCGCTCG-CTCG 60 **** * ** * * * * ***** ** * *** ** **** consensus_7345#0 CCATCTCTGCCGCCGCCTCGCTCGCTCGCTCGCCGTCCTCCGCCGCTGCCTTGCTC---- 596 consensus_7345#1 CCGT-----CCGCCGCCTCGCTCGCTCGCTCGCCGTCCGCCGCCGCCGCCTTGCTCAGTT 115 ** * ***************************** ******* ********* consensus_7345#0 ----GTCGTCCTCCGCCGCCGCGGCGCCGGCACGCCTCGTCTATCCCCTCTCTCGGCTCA 652 consensus_7345#1 GCTCGTCGTCCTCCGCCGCCGCGGCGCCAGCACGCCTCGTCCTTCCCCTCTCTCGGCTCA 175 ************************ ************ ***************** consensus_7345#0 GTACTTTGGTTTTCTCCCATGTCGACATCATTAGCTGAAGTTCCGCAAGGAGGACATATC 712 consensus_7345#1 GTACTTTGGTTTTCTCCCATGTCGACATCATTAGCTGAAGCTTCGCAAGGAGGATATATC 235 **************************************** * *********** ***** consensus_7345#0 AAAGAGGTCATTGCAGAGGGCTCTTCGGGAGGCCTATCATCGTCAACACAGTTATTGGCT 772 consensus_7345#1 AAAGAGGTCATTGCAGAGGGCTCTTCGGGAGGCTTATCATCATCAACACAATTGTTGTCT 295 ********************************* ******* ******** ** *** ** consensus_7345#0 ACAAAACGAAAGTTAGCAGCATCGAATCCTCCAACAGCAAAGCGAAGACGATCACCTATT 832 consensus_7345#1 GCAAAACGAAAGTTAGCAGCATCGAATCCTTCGACAGCGAAGCGAAGACGATCACCTATT 355 ***************************** * ***** ********************* consensus_7345#0 GCATTGCCAATAGTCAGGTCTCCAGGAGTGCGACAAATTATTTCCCAAAATGAAGTCATC 892 consensus_7345#1 GTATTGCCAATAGTCAGGTCTCCAGGAGTGCGCCAAATTATTTCTCAAAATGCTCTCATC 415 * ****************************** *********** ******* ***** consensus_7345#0 ATGGAGAGATCACAAGTTGCTGGTCAGATGTCCCCAAGTGCAGAGTCTCCAAGAGCTAGA 952 consensus_7345#1 ATGGAGAGATCACAAGTTCCTGGTCATATGTCCCCAAGTGCAGAGTCTCCAAGAGCTAGA 475 ****************** ******* ********************************* consensus_7345#0 TCTATGTCTCCAGTGGCAAGGTTCGTATCAAGTCCGTCTGCTATCCCAATTGAGCTGGAT 1012 consensus_7345#1 TCTCTGTCTCCAGTGGCAAGGTTCGTATCAAGTCCGTCTACTATCC---TTGAGCTGGAT 532 *** *********************************** ****** *********** consensus_7345#0 GTTGAAACTCAGCCAAGGGAGTCAACTCAATCAACACCTCATGTTGTGACTCATCGTTCT 1072 consensus_7345#1 GTTGAAAATCAGCCAAGGGAATCAAGTCAACCAACACCTCATGTTGTGACTCATCGTTCT 592 ******* ************ **** **** ***************************** consensus_7345#0 GGGAAAAGAACACTCAAATCTTTAATCTGGAAAGAATTTAAACCATTTTATTCTTCTACT 1132 consensus_7345#1 GG---------------------------------------------------------- 594 ** consensus_7345#0 GGAAAGGTGCTCTATGGGAAATGCATTCATTGCAGTAAGGTAATTAAAGCTAACCGTGGT 1192 consensus_7345#1 ------------------------------------------------------------ consensus_7345#0 TCGGGGACAAGTCAATGCCATAGACATTTACTTAAGTGTCCACTGAGAATTAGAGTGCAA 1252 consensus_7345#1 ------------------------------------------------------------ consensus_7345#0 CAATTGGTTGAAAGTTTGCATTCCAGTCTATCTCCTAATGCATCTGTTCTAAAGGACTGG 1312 consensus_7345#1 ---------------------------TTAGCACCTAATACATTTGTTCTAAAGGACTGG 627 ** * ****** *** **************** consensus_7345#0 AAATTTGATCCTGATGTAGCACGTGCAGAACTTTTAAGGATGCTTGTTTTGCAAGAACTT 1372 consensus_7345#1 AAATTTGATCCTGATGTAGCACGTGCAGAACTTTTAAGGATGATTGTTTTGCAAGAACTT 687 ****************************************** ***************** consensus_7345#0 CCTTTCAGTTTTGTTGAACACCCTGGTTTTAGAAGATTTTGTGCAAGCTTGAACCCGTAC 1432 consensus_7345#1 CCTTCCAGCTTTGTTGAACACCTTGGTTTTAGAAGATTTTGTGCAAGCTTGAACCCGTAC 747 **** *** ************* ************************************* consensus_7345#0 TTTAGGGTGCTTTCCAGAATTACTATAAAGGGTGATTGCTTGGCTGCCTATCAAGAACAA 1492 consensus_7345#1 TTTAGGGTGGTTTCTAGAACTACTATAAAGGGTGATTGCTTGGCTGCCTATCAAGAACAA 807 ********* **** **** **************************************** consensus_7345#0 AAGTTAGCTTTGTTTGAGGTACTGAGGAAAACAAATTCTCGGGTTTCACTGGCGGCTGAC 1552 consensus_7345#1 AAGTTAGCTTTGCTTGAGGTACTGAGGAAAACAAATTCTCGGGTTTCACTGACGGCTGAC 867 ************ ************************************** ******** consensus_7345#0 ATGTGGTCATCTAATCAAAACCTAGGTTACATGTGTATAACTTGTCACTTCATTGACAAT 1612 consensus_7345#1 ATGTGGTCATCTAATCAAAACCTAGGTTACATGTGCATAACTTGTCACTTCATTGACAAT 927 *********************************** ************************ consensus_7345#0 GAATGGAATATTCAAAAGAGGATCATAAGATTCACTCAAGTGCGTACCC-ACATGATAGT 1671 consensus_7345#1 GAATGGAATATGCAAAAGAGGATCATAAGATTCACTCAAGTGCGTACCCCACATGATAGT 987 *********** ************************************* ********** consensus_7345#0 ATAGCTCTCTTCAATGAAATTCTAAAGTGTATTCAGGATTGGCAGATAGAAAGTAAGTTG 1731 consensus_7345#1 ATAGCTCTCTTCAATGAAATTATAAAGTGCATTCAAGATTGGCAGATAGAAAGTAAGTTG 1047 ********************* ******* ***** ************************ consensus_7345#0 TTCAGTATTACAGTAGACAATGCATCTGTTAATGATTCTATGGTTGTGGAATTGAAAGGA 1791 consensus_7345#1 TTCAGTATTACAGTAGACAATGCATCTACTAATGATTCTATGGTTGTGGAATTGAAAGGA 1107 *************************** ******************************* consensus_7345#0 AATCTCTTGGGTAAGCTTGCCATGCCTTGCAAAGGGGAGCTATTTCATTTCCGGTGCGCA 1851 consensus_7345#1 AATCTCTTGGGTAAACTTGCTATGCCTTGCAAAGGAGAGCTATTTCATTTCTGGTGCGCA 1167 ************** ***** ************** *************** ******** consensus_7345#0 GCTCACATCCTTAATCTTATTGTTCAAGATGGATTGAGTACTATCAGTGGTGCCATATCT 1911 consensus_7345#1 GCTCACATCTTTAATCCTATTGTTCAAGATGGATTGAGTACTATCAGTGCTGCCATATCC 1227 ********* ****** ******************************** ********* consensus_7345#0 AGGATAAGGGAAAGTGTAAAGTATATAAAAGCATCAGAAGCATGTGAGCAAAAATTTGAA 1971 consensus_7345#1 AGGATAAGGGAAAGTGTGAAGTATGTAAGAGCATCAGAAGCACGGGAGCAAAAATTTGAA 1287 ***************** ****** *** ************* * *************** consensus_7345#0 GAAATCATTGCACAAGTCGGAATTGTTGAAGAGAAGCGTCCTTCACTTGATGTGTCCACT 2031 consensus_7345#1 GAAATCATTGCACAAGTCGGAATTGTTGAAGAGAAGCGTCCTTCACTTGATGTCTCCACT 1347 ***************************************************** ****** consensus_7345#0 CGTTGGAATTCCACCTATTTGATGCTTTCCTCATCCTTATTATTCAGGAGGGCTTTTGAT 2091 consensus_7345#1 CGTTGGAATTCCACCTATTTGATGCTTTCCTCATCCTTATTATTCAGGAGGGCTTTTGAT 1407 ************************************************************ consensus_7345#0 TCATTGGATCGGTTTGATCCAAACTTTCAAGATGCTCCACTATTTTTTGATTGGGACAAT 2151 consensus_7345#1 TCATTGGATCGGTTTGATCCTAACTTTAAAGATGCTCCACAATTTTTCGATTGGGAGAAT 1467 ******************** ****** ************ ****** ******** *** consensus_7345#0 GCAGAAGTTCTTTGCAAACATCTCAAGATCTTCTATGATGCAACTGTTGTGGTTTCCGGG 2211 consensus_7345#1 GCAGAAGTTCTTTGCAAACATCTCAAGGTCTTCTATGATGCAACTGTTGTGGTTTCCGGG 1527 *************************** ******************************** consensus_7345#0 ACATCATATCCCACTGTTTCTCGCTACTTTCATGAATTTTGGAAAGTGAAGGTGATGCTT 2271 consensus_7345#1 ACATCATATCCCACTGTTACTCGCTACTTTCATGAATTTTGGAAAGTGAAGGTGATGATT 1587 ****************** ************************************** ** consensus_7345#0 CTAAATGAGTCCAACAGTGAGGATGTTCTTGTCGCTAGCATGGTTTCTAAAATGGATACA 2331 consensus_7345#1 CTAAATGAGTCCAACAATGAGGATGATCTTGTTGCTAGCTTGGTTTCTAAAATGGATACA 1647 **************** ******** ****** ****** ******************** consensus_7345#0 AAATTTCAGAAATATTGGGATCTGCAGTTCCTGCAGATTTGTGTTCCTGTTATTTTTTAT 2391 consensus_7345#1 AAATTTCAGAAATATTGGGATCTACAGTTCCTGCAGATTTGGGTTCCTGTTATTTTTGAT 1707 *********************** ***************** *************** ** consensus_7345#0 CCCAGATTTAAGTTGAAATTCCTTGAGTTTAGGCTGAAAGCAGGTTTTGGAGATAAGGCA 2451 consensus_7345#1 CCCAGATTTAAGTTGAAATTCCTTGAGTTTAGGCTGAAAGCAGGTTTTGGAGATAAGGCA 1767 ************************************************************ consensus_7345#0 ACTGGTCCAAATGGATATCTGTCTAGAATTAAGAGGATAGTCCGCAGTTGGTTTGTTGAA 2511 consensus_7345#1 ACTGGTCCAAATGGATATCTCCCTAGAATTAAGAGGACAGTCCGTACTTGGTTTGCTGAA 1827 ******************** *************** ****** * ******** **** consensus_7345#0 TATTCTTCACAAATTGGTGGTCCAAGCGCAATCAATTCTCAAGAAGCATCAACTAGTGGA 2571 consensus_7345#1 TATTCTTCACAAATTTGTGGTCCAAGCACAACCAATTCTCAAGAAGCATCAACTAGTGGG 1887 *************** *********** *** *************************** consensus_7345#0 GTGAATGTTGGTGGCAGCCAATTTGCTGACTGGAGGCAATATCTTCATGATCAAAGCAAG 2631 consensus_7345#1 GTGAATGTTGGTGGCAGCCAATTTGCTGACTAGAGGCAATATCTTCATGATCAAAGCAAG 1947 ******************************* **************************** consensus_7345#0 AGTAAAG-AAAGACTGAGTTAACTAGCTATCTCGAAGATATTCCTCAAGAAAATGATTTC 2690 consensus_7345#1 AGTAAAGTAAAGACTGAGTTAACTAGATATCTCGAAGATATTCCTCAAGAAAATGATTTC 2007 ******* ****************** ********************************* consensus_7345#0 CCTGATGATGATTTTGACATACTCCAGTGGTGGAGGGTAAACTCATGCAAATATCCAATA 2750 consensus_7345#1 CCTGATGATGATTTTGACATACTCTAGTGGTGGAGGGTGAACTCTTGCAAATATCCAATA 2067 ************************ ************* ***** *************** consensus_7345#0 TTATCACGCATGGCGCTTGATTTGCTTGCTGTCCCTGCATCTTCAGTTGCATCAGATTCT 2810 consensus_7345#1 TCATCACGCATGGCACTTGATTTGCTTGCTGTCCCTGCATCCTCAGTTGCATCAGAGTCT 2127 * ************ ************************** ************** *** consensus_7345#0 GCATTTTCTACTGGATCTAGAATCATTAGTGACTATAGGAGTAGGCTGGCTAATGGAACT 2870 consensus_7345#1 GCATTTTCTACTGGATAAAGAATCATTAGCGACTATAGGAGTAGGTTGGCTAGTGGAACT 2187 **************** *********** *************** ****** ******* consensus_7345#0 GTGGTGGCATTGGTTTGCCTTCAAGATTAGATGCGAGCAGATGGTTTTGGTGATCCCTAT 2930 consensus_7345#1 GTGGAGGCATTGGTTTGCCTTCAAGATTGGATGCGAGCCGATGGTTTTGGTGATCCATAT 2247 **** *********************** ********* ***************** *** consensus_7345#0 TCAATTCTAACTGATACGGTTGAGGACGATGATGTTAATATGCAACTATTAGGA-AGTAA 2989 consensus_7345#1 TCAATTCAAACTGATACGGCTGAGGGCGATGATGTTAATATGCAACTATTGGGACATTAA 2307 ******* *********** ***** ************************ *** * *** consensus_7345#0 TGCAGGAGCGTGCTCTGGTGG--TGGGGGCAAAACTCAATGAAATTTTCCTTTCTGGAAT 3047 consensus_7345#1 ATCATTTGACATCTCAGGCAAATTACCATGTGAGTTCTATGCAATCTGGGTT-CTGAGAA 2366 ** * *** ** * * ** *** *** * ** *** * consensus_7345#0 GTTATATTCTAACTGCA--AGGGATGAGATGGCCTTCAGCAGCTGCGAATGCTGCTACCA 3105 consensus_7345#1 ATTTTGCTAGTTCTGGAGCAGTGGTAAGTGGAGCTTGCTTTGTTTCCCA-GCTCATATCA 2425 ** * * *** * ** * * ** * *** * * * * *** ** ** consensus_7345#0 CTAGTTTTGTTCCCTGT-AGTTTTTATTTCAGTAACTTAGTTCGTTTAGATGCACTAGCC 3164 consensus_7345#1 GTGTTTCCCACACATGTCAGATTACATCCAAAATTTGTACGATGTATTGGAAATTTAGTT 2485 * ** * *** ** ** ** * ** ** * * *** consensus_7345#0 G---TTGTCATTTTTGTGCATGTCCAGAGCC--TG---CTGAAAATAGTAT--GAT---G 3211 consensus_7345#1 GAGCCTGGGATTTCTGGACTTCTTTTCTGCCGTTGAGCCTGAAATTCATATTTGATTTTG 2545 * ** **** ** * * * *** ** ****** * *** *** * consensus_7345#0 TATTGGAAATTCAGT-TGAGC--CTGGGATTTCTGGACTTTTTGTTCTGCCGTTTTGCTG 3268 consensus_7345#1 CCTGGTGAATTCTGCATGAGTGACAGGAATAGATGCAAGGATTAGGCGGCTTTGTTGCTG 2605 * * ***** * **** * ** ** ** * ** * ** * ****** consensus_7345#0 CTGC----TGC-TACCGTTCTGGCCTCCTGCTGCTGGGCTAGTGCTGCTGCTGGTTGAAA 3323 consensus_7345#1 TCAGGATATGCATGTCTTTTGAGTCCCTTTTTTTTTTCCCCTTTATGCTGTTG-TTAAGC 2664 *** * * ** * * * * * * * * ***** ** ** * consensus_7345#0 TCCTCAC-TGTGAGAAGGACATCAATTTTTGGTTGTATTTTGCAGTGTTGATATGAATTG 3382 consensus_7345#1 TATGAATATTTTGGAAGGGGATTTTTTTAGAACAATTTGATTAAGGATCGGTGGATTTTT 2724 * * * * ***** ** *** * * * ** * * * ** consensus_7345#0 TT--CAGATACAAGCCT------------------------------------------- 3397 consensus_7345#1 ATGCCAAATTGTAGACTCTGCTTTTCGCTGCAGTCACTGTCTTTCAGAAGATTTCAGGGC 2784 * ** ** ** ** consensus_7345#0 ------------------------------------------------------------ consensus_7345#1 CCAAGATGGTTNCTAATATTTACTGATTTTCTGTTTCAAAAAAAAAAAAAAAAAAAAAAA 2844 consensus_7345#0 -------- consensus_7345#1 AAAAAAAA 2852 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||