Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7357 cluster # 7357       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7357#0 length = 911 sequences # 4  

consensusID : consensus_7357#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 911
fasta sequence
                              [GCTATCTAAGCACCGGCATTTGCATACAGCCGCCTAAGCAAAGAGCACAGCAAGTATACGCGAATCTGAGTGTGTGAGAGAGACTAGTAGCACAGACGAAGGTATGGCGTTCTACCTCGGCAGCATGGGTGGCTCGCCATCGTCATGGGGGGTGGCGGAGGTGCCGGTGCCGAGCAGCAGGCCGTGGAGCAAGGCGGAGGACAAGGTGTTCGAGAGCGCGCTCGTGGCGTTCCCGGAGCACACGCACAACCGGTGGGCGCTCGTCGCGTCGCGGCTCCCGGGGCGCTCGGCGCACGAGGTTTGGGAACACTACCAGGTGCTCGTGGACGATGTCGACCTCATCGAGCGTGGCATGGTTGCGTCCCCGGGCTGCTGGGACGACGACAACAACAGCGCCGGCCACGGCCGTGGCAGTGGTGGGGATGAGCGTCGTCGCGGCGTGCCCTGGACTGAGGAGGAGCACAGGCTATTTCTTGAAGGGCTAGAGAAATAT-GGGCGTGGCGACTGGCGCAACATCTCGCGCTGGTCGGTGAAGACGCGGACTCCGACGCAAGTGGCGAGCCATGCGCAGAAGTTCTTCATCCGACAGGCCAACGCCAGCAGCCGTGGCGACTCCAAGCGTAAGAGCATCCACGACATCACTGCCCCATGATGTGTGGTCCGATCGAGGATATGCATTATGATCCGGTCCAGTCTAGGTTTAGTTGTATTTCCATCAATTCCAACTAGCTTTCAACCCCATTTCAAAGAGGAGAGAACGAAGGGAGTTTAGTCGTCGGCCCTCCCTGTTAGTTCCTCTCTCTGTGTTGTGTAAAATATAGCTAGGCAATAGCTAAAACTAAGCTTGGCTGGAACCTGAGATCAATTGTTGTGATACTAGTTTGTGTACTTGTCAAATAATATTTGTATCC]

[+] EMBL AK107134             [GCTATCTAAGCACCGGCATTTGCATACAGCCGCCTAAGCAAAGAGCACAGCAAGTATACGCGAATCTGAGTGTGTGAGAGAGACTAGTAGCACAGACGAAGGTATGGCGTTCTACCTCGGCAGCATGGGTGGCTCGCCATCGTCATGGGGGGTGGCGGAGGTGCCGGTGCCGAGCAGCAGGCCGTGGAGCAAGGCGGAGGACAAGGTGTTCGAGAGCGCGCTCGTGGCGTTCCCGGAGCACACGCACAACCGGTGGGCGCTCGTCGCGTCGCGGCTCCCGGGGCGCTCGGCGCACGAGGTTTGGGAACACTACCAGGTGCTCGTGGACGATGTCGACCTCATCGAGCGTGGCATGGTTGCGTCCCCGGGCTGCTGGGACGACGACAACAACAGCGCCGGCCACGGCCGTGGCAGTGGTGGGGATGAGCGTCGTCGCGGCGTGCCCTGGACTGAGGAGGAGCACAGGCTATTTCTTGAAGGGCTAGAGAAATAT GGGCGTGGCGACTGGCGCAACATCTCGCGCTGGTCGGTGAAGACGCGGACTCCGACGCAAGTGGCGAGCCATGCGCAGAAGTTCTTCATCCGACAGGCCAACGCCAGCAGCCGTGGCGACTCCAAGCGTAAGAGCATCCACGACATCACTGCCCCATGATGTGTGGTCCGATCGAGGATATGCATTATGATCCGGTCCAGTCTAGGTTTAGTTGTATTTCCATCAATTCCAACTAGCTTTCAACCCCATTTCAAAGAGGAGAGAACGAAGGGAGTTTAGTCGTCGGCCCTCCCTGTTAGTTCCTCTCTCTGTGTTGTGTAAAATATAGCTAGGCAATAGCTAAAACTAAGCTTGGCTGGAACCTGAGATCAATTGTTGTGATACTAGTTTGTGTACTTGTCAAATAATATTTGTATCC]
[+] EMBL CF304501             [  tcgtgccGCACCGGCATTTGCATACAGCCGCCTAAGCAAAGAGCACAGCCTGTATACGCGAATCTGAGTGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF304582             [           ACCGGCATTTGCATACAGCCGCCTAAGCAAAGAGCACAGCAAGTATACGCGAATCTGAGTGTGTGAGAGAGACTAGTAGCACAGACGAAGGTATGGCGTTCTACCTCGGCAGCATGGGTGGCTCGCCATCGTCATGGGGGGTGGCGGAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF303286             [             CGGCATTTGCATACAGCCGCCTAAGCAAAGAGCACAGCAAGTATACGCGAATCTGAGTGTGTGAGAGAGACTAGTAGCACAGACGAAGGTATGGCGTTCTACCTCGGCAGCATGGGTGGCTCGCCATCGTCATGGGGGGTGGCGGAGGTGCCGGTGCCGAGCAGCAGGCCGTGGAGCAAGGCGGAGGACAAGGTGTTCGAGAGCGCGCTCGTGGCGTTCCCGGAGCACACGCACAACCGGTGGGCGCTCGTCGCGTCGCGGCTCCCGGGGCGCTCGGCGCACGAGGTTTGGGAACACTACCAGGTGCTCGTGGACGATGTCGACCTCATCGAGCGTGGCATGGTTGCGTCCCCGGGCTGCTGGGACGACGACAACAACAGCGCCGGCCACGGCCGTGGCAGTGGTGGGGATGAGCGTCGTCGCGGCGTGCCCTGGACTGAGGAGGAGCACAGGCTATTTCTTGAAGGGCTAGAGAAATATGGGGCGTGGCGACTGGCGCAACATCTC                                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_7357#0 GCTATCTAAGCACCGGCATTTGCATACAGCCGCCTAAGCAAAGAGCACAGCAAGTATACG CGAATCTGAGTGTGTGAGAGAGACTAGTAGCACAGACGAAGGTATGGCGTTCTACCTCGG CAGCATGGGTGGCTCGCCATCGTCATGGGGGGTGGCGGAGGTGCCGGTGCCGAGCAGCAG GCCGTGGAGCAAGGCGGAGGACAAGGTGTTCGAGAGCGCGCTCGTGGCGTTCCCGGAGCA CACGCACAACCGGTGGGCGCTCGTCGCGTCGCGGCTCCCGGGGCGCTCGGCGCACGAGGT TTGGGAACACTACCAGGTGCTCGTGGACGATGTCGACCTCATCGAGCGTGGCATGGTTGC GTCCCCGGGCTGCTGGGACGACGACAACAACAGCGCCGGCCACGGCCGTGGCAGTGGTGG GGATGAGCGTCGTCGCGGCGTGCCCTGGACTGAGGAGGAGCACAGGCTATTTCTTGAAGG GCTAGAGAAATATGGGCGTGGCGACTGGCGCAACATCTCGCGCTGGTCGGTGAAGACGCG GACTCCGACGCAAGTGGCGAGCCATGCGCAGAAGTTCTTCATCCGACAGGCCAACGCCAG CAGCCGTGGCGACTCCAAGCGTAAGAGCATCCACGACATCACTGCCCCATGATGTGTGGT CCGATCGAGGATATGCATTATGATCCGGTCCAGTCTAGGTTTAGTTGTATTTCCATCAAT TCCAACTAGCTTTCAACCCCATTTCAAAGAGGAGAGAACGAAGGGAGTTTAGTCGTCGGC CCTCCCTGTTAGTTCCTCTCTCTGTGTTGTGTAAAATATAGCTAGGCAATAGCTAAAACT AAGCTTGGCTGGAACCTGAGATCAATTGTTGTGATACTAGTTTGTGTACTTGTCAAATAA TATTTGTATCC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)