|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7362#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2927 fasta sequence
[GGCGCTAAGCACATGCATCTCCCCGTCTTCCTCGACGACCCGCGCCGCCTCCTCTCCTCCTCCGCCGCCGCCTCCGCCTCCGCCCGGACCCTCGCCCGCCTCCACGCCCTCCTCATCGTCTCCTCCTCCGCCTCCCACACCCTCATCTCCTCGCTCGCCGCCGCCTACGCCCGCGCTGGCGACCTCGCCGCCGCGGAGTCCACCCTCACCGCAACCGCCGCCTCATCCTCCATCGCCGCGTGGAACGCCATCATCGCCGCGCACTCCCGCCGCGGCTCCCCGGCATCCGCGCTCCGCGTCTTCCGCGCGCTCCCGCCCGCCGCGCGCCCCGACAGCACCACCTTCACGCTCGCGCTCTCCGCGTGCGCGCGCCTCGGGGACCTTCGCGGCGGGGAGTCCGTCAGGGACCGCGCGTTCGACGCCGGGTACAAGGACGACGTCTTCGTCTGCTCGTCGCTGCTCCACCTCTACGCGAGATGGGGCGCCATGGGCGACGCGGTCAAGGTGTTCGTCCGAATGCCGAGGAGGGACCGCGTCACCTGGAGCACCATGGTTGCTGGTTTCGTGAGTGCTGGACAGCCACTGGATGCGATTCAGATGTACAGGAGGATGAGGGAGGATGGTGTGAAGGGAGATGAGGTGGTCATGATTGGGGTTATACAAGCGTGCACAGCAGCCAGAAATGTCCGAATGGGAGCTTCAGTTCATGGGCATCTCTTACGGCATGGAATGAGGATGGATGTTGTTACTGCAACAAGCCTCGTGGATATGTATGCAAAGAATGGACTACTTGATGTGGCGTGCCGAGTTTTTGGTCTGATGGTGCACCGGAATGATGTCTCATGGAGCGCGATGATCTCAGGTTTTGCACAGAATGGGCAATCGGATGAGGCACTTCGGTTGTTCAGAAATATGCAGGCTTCTGGTATTCAGCCTGACTCAGGAGCACTTGTTAGTGCTCTGCTAGCTTGCTCAAATATTGGATTCTTGAAGCTAGGGAGGTCAGTACATGGTTTCATCGTGAGGAGGTTTGATTTTAATTGTATCCTCGGTACAGCAGCCATTGATATGTACTCAAAATGCGGCTCCCTAGCAAGTGCACAGATGCTTTTCAACATGATCAGTGATAGAGACTTGATCTTGTGGAATGCCATGATTGCGTGTTGTGGTGCTCATGGACGAGGCCAGGATGCGCTCACTTTGTTCCAAGAAATGAACGAAACTGGAATGAGACCAGATCATGCCACATTTGCTTCTCTTTTGTCTGCTCTAAGCCATTCTGGTCTTGTGGAGGAAGGGAAACTATGGTTTGGTCGCATGGTTAATCACTTCAAGATCACACCTGCTGAGAAACACTATGTCTGTCTAGTTGATCTTTTAGCACGTTCCGGTCTTGTGGAAGAAGCCAGTGACCTGCTCACATCAATGAAAGCTGAGCCAACCGTTGCCATTTGGGTTGCTCTACTTTCAGGCTGTCTGAATAACAAGAAGCTGGAGCTTGGAGAAAGTATAGCAGACAATATCCTTGAATTGCAACCTGACGATGTTGGCGTTCTTGCGTTGGTCTCAAATCTCTATGCTGCTACAAAGAAATGGGACAAAGTCAGACAAGTTAGAAAGCTAATGAAAGATTCTGGAAGCAAGAAGATGCCTGGCTGTAGCTCAATAGAGATACGCGGAACACGCCACGTGTTCGTGATGGAAGACCAGAGCCATCCTCAGCGTGAAGAGATCGTAAGTAAGGTGGCAAAGCTTGATTTAGAGATGAGGAAGATGGGCTACATTCCGAGAACAGAGTTTGTGTACCACGATCTGGAGGAGGAAGTGAAGGAACAGCAGCTCAGCTACCACAGCGAGAGGCTGGCCATCGCCTTCGGTTTGCTGAACACAGGCCCAGGAACAAGGCTTGTGATCATAAAGAACCTCAGGGTCTGTGGTGATTGCCATGATGCCATCAAGTACATCTCGAAGATCGCGGACCGGGAGATCGTAGTGCGAGACGCCAAACGCTTCCACCATTTCAAAGACGGAGTCTGCTCCTGCAGAGATTACTGGTGATGAAGGCTACCGAGAACCAGCATGGCAAGAGGATGCGTGTTGCTGTATGTATACCCAACTGATCCCCCTAGGCGGGGACCATCAGAAGAAGTTCAGCCACGCAAGGCGGCCACGTCCGTCCGTCCGTCACGGGGGACCCGGCGGCGTGGTAGTGGTGCGGTGCCCGTCGCCTTCGCCATTCCCGGCCGCGGGCGTCATCTGTCGCGGCGAAAACGACCCGGGAGGTGGCGGCAAAGGCTTTTGCTTCCTACCCGCTGGGGCGCGCGCGTCGCCGTGATCGGTACGAATCTCGCGGGGGGAAGTGGTGGTGGCCCAGACAGATCGTGATAACGTTGGACTTTGCGCGCAGGTCGCGTTGGTTGGAGTGGTTTGCGGTCTAGGACACTTGCTTTTTTCCCCAGTAGGATGATCACCCAAGACCGCTGCACTGCACCTGCCCCATGTGGGAGCAGCATCCAGCATGGCCAGTTCGCAACGCTACACCGGGAGGAAGCAAAAAGGTTTCTTCGCCGTTGACTTATTACGGGTGTGGCCAGAAGAAATTCGGCGTTTGGTTTGCTGTGCATATGTGTGAGCCATGGTAGTTACATGCTGTTTCTGTTTCCACTGGTATAGTGGTATTGCCCGTTTCGGTCCCAGGTGAGTCTGAACTCTGAAGACCATTTTATCTTTCACAAGATTCTGTAATAATCTGGTTGGTGGATGAAGGCAGTGTTTTCATAAAAGATTCATTAATTTCGTGGTGGGATTTAGTGTGTCCAGTGTAATCATACAGGGTTCATCTCACTGTCTGCCAACCTTTGTGTTCTAATTTGAAAAGAAACGAATTGATATTAGGTTTTTTTTTTCCTTAACAAAAAAGTACCGAA]
[+] EMBL AK074016 [GGCGCTAAGCACATGCATCTCCCCGTCTTCCTCGACGACCCGCGCCGCCTCCTCTCCTCCTCCGCCGCCGCCTCCGCCTCCGCCCGGACCCTCGCCCGCCTCCACGCCCTCCTCATCGTCTCCTCCTCCGCCTCCCACACCCTCATCTCCTCGCTCGCCGCCGCCTACGCCCGCGCTGGCGACCTCGCCGCCGCGGAGTCCACCCTCACCGCAACCGCCGCCTCATCCTCCATCGCCGCGTGGAACGCCATCATCGCCGCGCACTCCCGCCGCGGCTCCCCGGCATCCGCGCTCCGCGTCTTCCGCGCGCTCCCGCCCGCCGCGCGCCCCGACAGCACCACCTTCACGCTCGCGCTCTCCGCGTGCGCGCGCCTCGGGGACCTTCGCGGCGGGGAGTCCGTCAGGGACCGCGCGTTCGACGCCGGGTACAAGGACGACGTCTTCGTCTGCTCGTCGCTGCTCCACCTCTACGCGAGATGGGGCGCCATGGGCGACGCGGTCAAGGTGTTCGTCCGAATGCCGAGGAGGGACCGCGTCACCTGGAGCACCATGGTTGCTGGTTTCGTGAGTGCTGGACAGCCACTGGATGCGATTCAGATGTACAGGAGGATGAGGGAGGATGGTGTGAAGGGAGATGAGGTGGTCATGATTGGGGTTATACAAGCGTGCACAGCAGCCAGAAATGTCCGAATGGGAGCTTCAGTTCATGGGCATCTCTTACGGCATGGAATGAGGATGGATGTTGTTACTGCAACAAGCCTCGTGGATATGTATGCAAAGAATGGACTACTTGATGTGGCGTGCCGAGTTTTTGGTCTGATGGTGCACCGGAATGATGTCTCATGGAGCGCGATGATCTCAGGTTTTGCACAGAATGGGCAATCGGATGAGGCACTTCGGTTGTTCAGAAATATGCAGGCTTCTGGTATTCAGCCTGACTCAGGAGCACTTGTTAGTGCTCTGCTAGCTTGCTCAAATATTGGATTCTTGAAGCTAGGGAGGTCAGTACATGGTTTCATCGTGAGGAGGTTTGATTTTAATTGTATCCTCGGTACAGCAGCCATTGATATGTACTCAAAATGCGGCTCCCTAGCAAGTGCACAGATGCTTTTCAACATGATCAGTGATAGAGACTTGATCTTGTGGAATGCCATGATTGCGTGTTGTGGTGCTCATGGACGAGGCCAGGATGCGCTCACTTTGTTCCAAGAAATGAACGAAACTGGAATGAGACCAGATCATGCCACATTTGCTTCTCTTTTGTCTGCTCTAAGCCATTCTGGTCTTGTGGAGGAAGGGAAACTATGGTTTGGTCGCATGGTTAATCACTTCAAGATCACACCTGCTGAGAAACACTATGTCTGTCTAGTTGATCTTTTAGCACGTTCCGGTCTTGTGGAAGAAGCCAGTGACCTGCTCACATCAATGAAAGCTGAGCCAACCGTTGCCATTTGGGTTGCTCTACTTTCAGGCTGTCTGAATAACAAGAAGCTGGAGCTTGGAGAAAGTATAGCAGACAATATCCTTGAATTGCAACCTGACGATGTTGGCGTTCTTGCGTTGGTCTCAAATCTCTATGCTGCTACAAAGAAATGGGACAAAGTCAGACAAGTTAGAAAGCTAATGAAAGATTCTGGAAGCAAGAAGATGCCTGGCTGTAGCTCAATAGAGATACGCGGAACACGCCACGTGTTCGTGATGGAAGACCAGAGCCATCCTCAGCGTGAAGAGATCGTAAGTAAGGTGGCAAAGCTTGATTTAGAGATGAGGAAGATGGGCTACATTCCGAGAACAGAGTTTGTGTACCACGATCTGGAGGAGGAAGTGAAGGAACAGCAGCTCAGCTACCACAGCGAGAGGCTGGCCATCGCCTTCGGTTTGCTGAACACAGGCCCAGGAACAAGGCTTGTGATCATAAAGAACCTCAGGGTCTGTGGTGATTGCCATGATGCCATCAAGTACATCTCGAAGATCGCGGACCGGGAGATCGTAGTGCGAGACGCCAAACGCTTCCACCATTTCAAAGACGGAGTCTGCTCCTGCAGAGATTACTGGTGATGAAGGCTACCGAGAACCAGCATGGCAAGAGGATGCGTGTTGCTGTATGTATACCCAACTGATCCCCCTAGGCGGGGACCATCAGAAGAAGTTCAGCCACGCAAGGCGGCCACGTCCGTCCGTCCGTCACGGGGGACCCGGCGGCGTGGTAGTGGTGCGGTGCCCGTCGCCTTCGCCATTCCCGGCCGCGGGCGTCATCTGTCGCGGCGAAAACGACCCGGGAGGTGGCGGCAAAGGCTTTTGCTTCCTACCCGCTGGGGCGCGCGCGTCGCCGTGATCGGTACGAATCTCGCGGGGGGAAGTGGTGGTGGCCCAGACAGATCGTGATAACGTTGGACTTTGCGCGCAGGTCGCGTTGGTTGGAGTGGTTTGCGGTCTAGGACACTTGCTTTTTTCCCCAGTAGGATGATCACCCAAGACCGCTGCACTGCACCTGCCCCATGTGGGAGCAGCATCCAGCATGGCCAGTTCGCAACGCTACACCGGGAGGAAGCAAAAAGGTTTCTTCGCCGTTGACTTATTACGGGTGTGGCCAGAAGAAATTCGGCGTTTGGTTTGCTGTGCATATGTGTGAGCCATGGTAGTTACATGCTGTTTCTGTTTCCACTGGTATAGTGGTATTGCCCGTTTCGGTCCCAGGTGAGTCTGAACTCTGAAGACCATTTTATCTTTCACAAGATTCTGTAATAATCTGGTTGGTGGATGAAGGCAGTGTTTTCATAAAAGATTCATTAATTTCGTGGTGGGATTTAGTGTGTCCAGTGTAATCATACAGGGTTCATCTCACTGTCTGCCAACCTTTGTGTTCTAATTTGAAAAGAAACGAATTGATATTAGGTTTTTTTTTTCCTTAACAAAAAAGTACCGAA]
consensusID : consensus_7362#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2279 fasta sequence
[TATTTAAAGGAAATTAAGATTGTGCTAACTGAGGGATCAAGCAGATTGTAAGCATGTCCTTACTAAATCAAATTTAGAGATGCAAGTGGGTAGTCCCGCTACCCGCATAAAAACCCGCTTGTTAGTCTATTTCCCGCATGGTAGTACAAAATTTAGAAGAAAAAATGAACTAGAAGTGGAATAAGCGGGACAAAAAAACCCTCTTGTCAGCCCCGCTTGCATCCCTAATCAAAATGTACCCACATTCCGACATAGCACAGGAAACCAGATTCTTCATAAATTGTTGAAATCACATTCCCGATTCGATCGTCAAATCCGCGCCGCTGCGCCATCTACTCACCCTCGACCTGTCATCCTCCGCCACCTTCTTCGACTGCCCAGAGGTAGATCTTTTGCCGCTCTTCCTCGATGACCGATCCGTCGTTCCGGCGCTAAGCACATGCATCTCCCCGTCTTCCTCGACGACCCGCGCCGCCTCCTCTCCTCCTCCGCCGCCGCCTCCGCCTCCGCCCGGACCCTCGCCCGCCTCCACGCCCTCCTCATCGTCTCCTCCTCCGCCTCCCACACCCTCATCTCCTCGCTCGCCGCCGCCTACGCCCGCGCTGGCGACCTCGCCGCCGCGGAGTCCACCCTCACCGCAACCGCCGCCTCATCCTCCATCGCCGCGTGGAACGCCATCATCGCCGCGCACTCCCGCCGCGGCTCCCCGGCATCCGCGCTCCGCGTCTTCCGCGCGCTCCCGCCCGCCGCGCGCCCCGACAGCACCACCTTCACGCTCGCGCTCTCCGCGTGCGCGCGCCTCGGGGACCTTCGCGGCGGGGAGTCCGTCAGGGACCGCGCGTTCGACGCCGGGTACAAGGACGACGTCTTCGTCTGCTCGTCGCTGCTCCACCTCTACGCGAGATGGGGCGCCATGGGCGACGCGGTCAAGGTGTTCGTCCGAATGCCGAGGAGGGACCGCGTCACCTGGAGCACCATGGTTGCTGGTTTCGTGAGTGCTGGACAGCCACTGGATGCGATTCAAATGTACAGGAGGATGAGGGAGGATGGTGTGAAGGGAGATGAGGTGGTCATGATTGGGGTTATACAAGCGTGCACAGCAGCCAGAAATGTCCGAATGGGAGCTTCAGTTCATGGGCATCTCTTACGGCATGGAATGAGGATGGATGTTGTTACTGCAACAAGCCTCGTGGATATGTATGCAAAGAATGGACTACTTGATGTGGCGTGCCGAGTTTTTGGTCTGATGGTGCACCGGAATGATGTCTCATGGAGCGCGATGATCTCAGGTTTTGCACAGAATGGGCAATCGGATGAGGCACTTCGGTTGTTCAGAAATATGCAGGCTTCTGGTATTCAGCCTGACTCAGGAGCACTTGTTAGTGCTCTGCTAGCTTGCTCAAATATTGGATTCTTGAAGCTAGGGAGGTCAGTACATGGTTTCATCGTGAGGAGGTTTGATTTTAATTGTATCCTCGGTACAGCAGCCATTGATATGTACTCAAAATGCGGCTCCCTAGCAAGTGCACAGATGCTTTTCAACATGATCAGTGATAGAGACTTGATCTTGTGGAATGCCATGATTGCGTGTTGTGGTGCTCATGGACGAGGCCAGGATGCGCTCACTTTGTTCCAAGAAATGAACGAAACTGGAATGAGACCAGATCATGCCACATTTGCTTCTCTTTTGTCTGCTCTAAGCCATTCTGGTCTTGTGGAGGAAGGGAAACTATGGTTTGGTCGCATGGTTAATCACTTCAAGATCACACCTGCTGAGAAACACTATGTCTGTCTAGTTGATCTTTTAGCACGTTCCGGTCTTGTGGAAGAAGCCAGTGACCTGCTCACATCAATGAAAGCTGAGCCAACCGTTGCCATTTGGGTTGCTCTACTTTCAGGCTGTCTGAATAACAAGAAGCTGGAGCTTGGAGAAAGTATAGCAGACAATATCCTTGAATTGCAACCTGACGATGTTGGCGTTCTTGCGTTGGTCTCAAATCTCTATGCTGCACGATCTGGAGGAGGAAGTGAAGGAACAGCAGCTCAGCTACCACAGCGAGAGGCTGGCCATCGCCTTCGGTTTGCTGAACACAGGCCCAGGAACAAGGCTTGTGATCATAAAGAACCTCAGGGTCTGTGGTGATTGCCATGATGCCATCAAGTACATCTCGAAGATCGCGGACCGGGAGATCGTAGTGCGAGACGCCAAACGCTTCCACCATTTCAAAGACGGAGTCTGCTCCTGCAGAGATTACTGGTGATGAAGGTAGCAGTTTCAT]
[-] EMBL AK106808 [TATTTAAAGGAAATTAAGATTGTGCTAACTGAGGGATCAAGCAGATTGTAAGCATGTCCTTACTAAATCAAATTTAGAGATGCAAGTGGGTAGTCCCGCTACCCGCATAAAAACCCGCTTGTTAGTCTATTTCCCGCATGGTAGTACAAAATTTAGAAGAAAAAATGAACTAGAAGTGGAATAAGCGGGACAAAAAAACCCTCTTGTCAGCCCCGCTTGCATCCCTAATCAAAATGTACCCACATTCCGACATAGCACAGGAAACCAGATTCTTCATAAATTGTTGAAATCACATTCCCGATTCGATCGTCAAATCCGCGCCGCTGCGCCATCTACTCACCCTCGACCTGTCATCCTCCGCCACCTTCTTCGACTGCCCAGAGGTAGATCTTTTGCCGCTCTTCCTCGATGACCGATCCGTCGTTCCGGCGCTAAGCACATGCATCTCCCCGTCTTCCTCGACGACCCGCGCCGCCTCCTCTCCTCCTCCGCCGCCGCCTCCGCCTCCGCCCGGACCCTCGCCCGCCTCCACGCCCTCCTCATCGTCTCCTCCTCCGCCTCCCACACCCTCATCTCCTCGCTCGCCGCCGCCTACGCCCGCGCTGGCGACCTCGCCGCCGCGGAGTCCACCCTCACCGCAACCGCCGCCTCATCCTCCATCGCCGCGTGGAACGCCATCATCGCCGCGCACTCCCGCCGCGGCTCCCCGGCATCCGCGCTCCGCGTCTTCCGCGCGCTCCCGCCCGCCGCGCGCCCCGACAGCACCACCTTCACGCTCGCGCTCTCCGCGTGCGCGCGCCTCGGGGACCTTCGCGGCGGGGAGTCCGTCAGGGACCGCGCGTTCGACGCCGGGTACAAGGACGACGTCTTCGTCTGCTCGTCGCTGCTCCACCTCTACGCGAGATGGGGCGCCATGGGCGACGCGGTCAAGGTGTTCGTCCGAATGCCGAGGAGGGACCGCGTCACCTGGAGCACCATGGTTGCTGGTTTCGTGAGTGCTGGACAGCCACTGGATGCGATTCAAATGTACAGGAGGATGAGGGAGGATGGTGTGAAGGGAGATGAGGTGGTCATGATTGGGGTTATACAAGCGTGCACAGCAGCCAGAAATGTCCGAATGGGAGCTTCAGTTCATGGGCATCTCTTACGGCATGGAATGAGGATGGATGTTGTTACTGCAACAAGCCTCGTGGATATGTATGCAAAGAATGGACTACTTGATGTGGCGTGCCGAGTTTTTGGTCTGATGGTGCACCGGAATGATGTCTCATGGAGCGCGATGATCTCAGGTTTTGCACAGAATGGGCAATCGGATGAGGCACTTCGGTTGTTCAGAAATATGCAGGCTTCTGGTATTCAGCCTGACTCAGGAGCACTTGTTAGTGCTCTGCTAGCTTGCTCAAATATTGGATTCTTGAAGCTAGGGAGGTCAGTACATGGTTTCATCGTGAGGAGGTTTGATTTTAATTGTATCCTCGGTACAGCAGCCATTGATATGTACTCAAAATGCGGCTCCCTAGCAAGTGCACAGATGCTTTTCAACATGATCAGTGATAGAGACTTGATCTTGTGGAATGCCATGATTGCGTGTTGTGGTGCTCATGGACGAGGCCAGGATGCGCTCACTTTGTTCCAAGAAATGAACGAAACTGGAATGAGACCAGATCATGCCACATTTGCTTCTCTTTTGTCTGCTCTAAGCCATTCTGGTCTTGTGGAGGAAGGGAAACTATGGTTTGGTCGCATGGTTAATCACTTCAAGATCACACCTGCTGAGAAACACTATGTCTGTCTAGTTGATCTTTTAGCACGTTCCGGTCTTGTGGAAGAAGCCAGTGACCTGCTCACATCAATGAAAGCTGAGCCAACCGTTGCCATTTGGGTTGCTCTACTTTCAGGCTGTCTGAATAACAAGAAGCTGGAGCTTGGAGAAAGTATAGCAGACAATATCCTTGAATTGCAACCTGACGATGTTGGCGTTCTTGCGTTGGTCTCAAATCTCTATGCTGCACGATCTGGAGGAGGAAGTGAAGGAACAGCAGCTCAGCTACCACAGCGAGAGGCTGGCCATCGCCTTCGGTTTGCTGAACACAGGCCCAGGAACAAGGCTTGTGATCATAAAGAACCTCAGGGTCTGTGGTGATTGCCATGATGCCATCAAGTACATCTCGAAGATCGCGGACCGGGAGATCGTAGTGCGAGACGCCAAACGCTTCCACCATTTCAAAGACGGAGTCTGCTCCTGCAGAGATTACTGGTGATGAAGGTAGCAGTTTCAT]
[+] EMBL CB641053 [ TGCACCGGAATGATGTCTCATGGAGCGCGATGATCTCAGGTTTTGCACAGAATGGGCAATCGGATGAGGCACTTCGGTTGTTCAGAAATATGCAGGCTTCTGGTATTCAGCCTGACTCAGGAGCACTTGTTAGTGCTCTGCTAGCTTGCTCAAATATTGGATTCTTGAAGCTAGGGAGGTCAGTACATGGTTTCATCGTGAGGAGGTTTGATTTTAATTGTATCCTCGGTACAGCAGCCATTGATATGTACTCAAAATGCGGCTCCCTAGCAAGTGCACAGATGCTTTTCAACATGATCAGTGATAGAGACTTGATCTTGTGGAATGCCATGATTGCGTGTTGTGGTGCTCATGGACGAGGCCAGGATGCGCTCACTTTGTTCCAAGAAATGAACGAAACTGGAATGAGACCAGATCATGCCACATTTGCTTCTCTTTTGTCTGCTCTAAGCCATTCTGGTCTTGTGGAGGAAGGGAAACTATGGTTTGGTCGCATGGTTAATCACTTCAAGATCACACCTGCTGAGAAACACTATGTCTGTCTAGTTGATCTTTTAGCACGTTCCGGTCTTGTGGAAGAAGCCAGT ]
consensusID : consensus_7362#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 805 fasta sequence
[TCTTTTATAGATTTAAAGGAAATTAAGATTGTGCTAACTGAGGGATCAAGCAGATTGTAAGCATGTCCTTACTAAATCAAATTTAGAGATGCAAGTGGGTAGTCCCGCTACCCGCATAAAAACCCGCTTGTTAGTCTATTTCCCGCATGGTAGTACAAAATTTAGAAGAAAAAATGAACTAGAAGTGGAATAAGCGGGACAAAAAAACCCTCTTGTCAGCCCCGCTTGCATCCCTAATCAAAATGTACCCACATTCCGACATAGCACAGGAAACCAGATTCTTCATAAATTGTTGAAATCACATTCCCTGTTTAGACAAAAAAAAATGCATTAGATGTTTATAACCGCTCAGATTAGAATAAATTGTACAATCCTCAGGAGGGACACATACCTGTTCAGAATAATAAAAAAAGGACGTAAAATATGTTATATCGACGTGAAGGTAAACAAGTGCCACAAGTATGTTCTGCCAATCTACATCCACACAATATACTTAGTTACTTAAACTTACCTGATCAGCAACTCAGATTGGCCACACAAGTCGCCGACGCATCATAAAAAGGCCGACGTGCAAAATATGTGGATTTGCTCAGGAGGATGGGTGCCAATGTGCCATGCCACAGCGCCGGAAAGTGAATTTGTGCAAGCCGAACCTGATTGGTTACTTCTCTTGCTGGATCATGCAGAAGTGCAGAACCGCAGATGATATCACTTACCCTCATGTTGCTACGGCGAGCATGGCACTTGCGGAATGGGATTGAGTTCCTCTGCAGTCGACTGCAGAGTGCCATCGTCACTGACATGT]
[+] EMBL CB656310 [TCTTTTATAGATTTAAAGGAAATTAAGATTGTGCTAACTGAGGGATCAAGCAGATTGTAAGCATGTCCTTACTAAATCAAATTTAGAGATGCAAGTGGGTAGTCCCGCTACCCGCATAAAAACCCGCTTGTTAGTCTATTTCCCGCATGGTAGTACAAAATTTAGAAGAAAAAATGAACTAGAAGTGGAATAAGCGGGACAAAAAAACCCTCTTGTCAGCCCCGCTTGCATCCCTAATCAAAATGTACCCACATTCCGACATAGCACAGGAAACCAGATTCTTCATAAATTGTTGAAATCACATTCCCTGTTTAGACAAAAAAAAATGCATTAGATGTTTATAACCGCTCAGATTAGAATAAATTGTACAATCCTCAGGAGGGACACATACCTGTTCAGAATAATAAAAAAAGGACGTAAAATATGTTATATCGACGTGAAGGTAAACAAGTGCCACAAGTATGTTCTGCCAATCTACATCCACACAATATACTTAGTTACTTAAACTTACCTGATCAGCAACTCAGATTGGCCACACAAGTCGCCGACGCATCATAAAAAGGCCGACGTGCAAAATATGTGGATTTGCTCAGGAGGATGGGTGCCAATGTGCCATGCCACAGCGCCGGAAAGTGAATTTGTGCAAGCCGAACCTGATTGGTTACTTCTCTTGCTGGATCATGCAGAAGTGCAGAACCGCAGATGATATCACTTACCCTCATGTTGCTACGGCGAGCATGGCACTTGCGGAATGGGATTGAGTTCCTCTGCAGTCGACTGCAGAGTGCCATCGTCACTGACATGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7362#0 ------------------------------------------------------------
consensus_7362#1 TATTTAAAGGAAATTAAGATTGTGCTAACTGAGGGATCAAGCAGATTGTAAGCATGTCCT 60
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 ------------------------------------------------------------
consensus_7362#1 TACTAAATCAAATTTAGAGATGCAAGTGGGTAGTCCCGCTACCCGCATAAAAACCCGCTT 120
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 ------------------------------------------------------------
consensus_7362#1 GTTAGTCTATTTCCCGCATGGTAGTACAAAATTTAGAAGAAAAAATGAACTAGAAGTGGA 180
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 ------------------------------------------------------------
consensus_7362#1 ATAAGCGGGACAAAAAAACCCTCTTGTCAGCCCCGCTTGCATCCCTAATCAAAATGTACC 240
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 ------------------------------------------------------------
consensus_7362#1 CACATTCCGACATAGCACAGGAAACCAGATTCTTCATAAATTGTTGAAATCACATTCCCG 300
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 ------------------------------------------------------------
consensus_7362#1 ATTCGATCGTCAAATCCGCGCCGCTGCGCCATCTACTCACCCTCGACCTGTCATCCTCCG 360
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 ------------------------------------------------------------
consensus_7362#1 CCACCTTCTTCGACTGCCCAGAGGTAGATCTTTTGCCGCTCTTCCTCGATGACCGATCCG 420
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 -------GGCGCTAAGCACATGCATCTCCCCGTCTTCCTCGACGACCCGCGCCGCCTCCT 53
consensus_7362#1 TCGTTCCGGCGCTAAGCACATGCATCTCCCCGTCTTCCTCGACGACCCGCGCCGCCTCCT 480
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CTCCTCCTCCGCCGCCGCCTCCGCCTCCGCCCGGACCCTCGCCCGCCTCCACGCCCTCCT 113
consensus_7362#1 CTCCTCCTCCGCCGCCGCCTCCGCCTCCGCCCGGACCCTCGCCCGCCTCCACGCCCTCCT 540
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CATCGTCTCCTCCTCCGCCTCCCACACCCTCATCTCCTCGCTCGCCGCCGCCTACGCCCG 173
consensus_7362#1 CATCGTCTCCTCCTCCGCCTCCCACACCCTCATCTCCTCGCTCGCCGCCGCCTACGCCCG 600
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CGCTGGCGACCTCGCCGCCGCGGAGTCCACCCTCACCGCAACCGCCGCCTCATCCTCCAT 233
consensus_7362#1 CGCTGGCGACCTCGCCGCCGCGGAGTCCACCCTCACCGCAACCGCCGCCTCATCCTCCAT 660
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CGCCGCGTGGAACGCCATCATCGCCGCGCACTCCCGCCGCGGCTCCCCGGCATCCGCGCT 293
consensus_7362#1 CGCCGCGTGGAACGCCATCATCGCCGCGCACTCCCGCCGCGGCTCCCCGGCATCCGCGCT 720
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CCGCGTCTTCCGCGCGCTCCCGCCCGCCGCGCGCCCCGACAGCACCACCTTCACGCTCGC 353
consensus_7362#1 CCGCGTCTTCCGCGCGCTCCCGCCCGCCGCGCGCCCCGACAGCACCACCTTCACGCTCGC 780
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 GCTCTCCGCGTGCGCGCGCCTCGGGGACCTTCGCGGCGGGGAGTCCGTCAGGGACCGCGC 413
consensus_7362#1 GCTCTCCGCGTGCGCGCGCCTCGGGGACCTTCGCGGCGGGGAGTCCGTCAGGGACCGCGC 840
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 GTTCGACGCCGGGTACAAGGACGACGTCTTCGTCTGCTCGTCGCTGCTCCACCTCTACGC 473
consensus_7362#1 GTTCGACGCCGGGTACAAGGACGACGTCTTCGTCTGCTCGTCGCTGCTCCACCTCTACGC 900
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 GAGATGGGGCGCCATGGGCGACGCGGTCAAGGTGTTCGTCCGAATGCCGAGGAGGGACCG 533
consensus_7362#1 GAGATGGGGCGCCATGGGCGACGCGGTCAAGGTGTTCGTCCGAATGCCGAGGAGGGACCG 960
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CGTCACCTGGAGCACCATGGTTGCTGGTTTCGTGAGTGCTGGACAGCCACTGGATGCGAT 593
consensus_7362#1 CGTCACCTGGAGCACCATGGTTGCTGGTTTCGTGAGTGCTGGACAGCCACTGGATGCGAT 1020
consensus_7362#2 ---------------------------TCTTTTATAGATTTAAAGGAAATTAA----GAT 29
* * * * * * * * ***
consensus_7362#0 TCAGATGTACAGGAGGATGAGGGAGGATGGTGTGAAGGGAGATGAGGTGGTCATGATTGG 653
consensus_7362#1 TCAAATGTACAGGAGGATGAGGGAGGATGGTGTGAAGGGAGATGAGGTGGTCATGATTGG 1080
consensus_7362#2 TGTGCTA-ACTGAGGGATCAAGCAG-ATTGTAAGCATGTCCTT-ACTAAATCAAATTTAG 86
* * ** * **** * * ** ** ** * * * * * *** ** *
consensus_7362#0 GGTTATACAAGCGTGCACAGCAGCCAGAAATGTCCGAATGGGAGCTTCAGTTCATGGGCA 713
consensus_7362#1 GGTTATACAAGCGTGCACAGCAGCCAGAAATGTCCGAATGGGAGCTTCAGTTCATGGGCA 1140
consensus_7362#2 AG--ATGCAAGTGGGTAGTCCCGCTA------CCCGCATAAAAACCCGCTTGTTAGTCTA 138
* ** **** * * * * ** * *** ** * * * * *
consensus_7362#0 TCTCTTACGGCATGGAATGAGGATGGATGTTGTTACTGCAACAAGCCTCGTGGATATGTA 773
consensus_7362#1 TCTCTTACGGCATGGAATGAGGATGGATGTTGTTACTGCAACAAGCCTCGTGGATATGTA 1200
consensus_7362#2 TTTCCCGCATGGTAGTACAAAATTTAGAAGAAAAAATGAACTAGAA---GTGGA-ATAAG 194
* ** * * * * * * * ** * * ***** **
consensus_7362#0 TGCAAAGAATGGACTACTTGATGTGGCGTGCC-GAGTTTTTGGTCTGATGGTGCACCGGA 832
consensus_7362#1 TGCAAAGAATGGACTACTTGATGTGGCGTGCC-GAGTTTTTGGTCTGATGGTGCACCGGA 1259
consensus_7362#2 CGGGACAAAAAAACCCTCTTGTCAGCCCCGCTTGCATCCCTAATC--AAAATGTACCCAC 252
* * ** ** * * * * ** * * * ** * ** ***
consensus_7362#0 ATGATGTCTCATGGAGCGCGATGATCTCAGGTTTTGCACAGAATGG-GCAATCGGATGAG 891
consensus_7362#1 ATGATGTCTCATGGAGCGCGATGATCTCAGGTTTTGCACAGAATGG-GCAATCGGATGAG 1318
consensus_7362#2 AT----TCCGACATAGCAC-AGGAAACCAGATTCTTCATAAATTGTTGAAATCACATTCC 307
** ** * *** * * ** *** ** * ** * * ** * **** **
consensus_7362#0 GCACTTCGGTTGTTCAGAAATATGCAGGCTTCTGGTATTCAGCCTGACTCAGGAGCACTT 951
consensus_7362#1 GCACTTCGGTTGTTCAGAAATATGCAGGCTTCTGGTATTCAGCCTGACTCAGGAGCACTT 1378
consensus_7362#2 -CTGTTTAGACAAAAAAAAATGCATTAGATGTTTATAACC-GCTCAGATTAGAATAAATT 365
* ** * * **** * * * ** * ** * ** * * **
consensus_7362#0 GT-TAGTGCTCTGCTAGCTTGCTCAAATATT-GGATTCTTGAAGCTAGGGAGGTCAGTAC 1009
consensus_7362#1 GT-TAGTGCTCTGCTAGCTTGCTCAAATATT-GGATTCTTGAAGCTAGGGAGGTCAGTAC 1436
consensus_7362#2 GTACAATCCTCAGGAGGGACACATACCTGTTCAGAATAATAAAAAAAGGACGTAAAATAT 425
** * * *** * * * * * ** ** * * ** *** * * **
consensus_7362#0 ATGGTTTCATCGTGAGGAGGTTTGATTTTAATTGTATCCTCGGTACAGCAGCCATTGATA 1069
consensus_7362#1 ATGGTTTCATCGTGAGGAGGTTTGATTTTAATTGTATCCTCGGTACAGCAGCCATTGATA 1496
consensus_7362#2 GTTATATCGACGTGAAGG----------TAA-------------ACAAGTGCCACAAGTA 462
* * ** ***** * *** *** **** **
consensus_7362#0 TGTACTCAAAATGCGGCTCCCTAGCAAGTGCACAGATGCTTT--TCAACATGATCAGTGA 1127
consensus_7362#1 TGTACTCAAAATGCGGCTCCCTAGCAAGTGCACAGATGCTTT--TCAACATGATCAGTGA 1554
consensus_7362#2 TGTTCTGCCAATCTACATCCACACAATATACTTAGTTACTTAAACTTACCTGATCAGCAA 522
*** ** *** *** * * * * ** * *** ** ******* *
consensus_7362#0 TAGAGACTTGATCTTGTGGAATGCCATGATTGCGTGTTGTGGTGCTCATGGACGAGGCCA 1187
consensus_7362#1 TAGAGACTTGATCTTGTGGAATGCCATGATTGCGTGTTGTGGTGCTCATGGACGAGGCCA 1614
consensus_7362#2 CTCAGA-TTGGCCACACAAGTCGCCGACGCATCATAAAAAGGCCGACGTGCAAAATATGT 581
*** *** * *** * * ** * ** * *
consensus_7362#0 GGATGCGCTCAC-----TTTGTTCCAAGAAATGA----ACGAAACTGGAATGAGACCAGA 1238
consensus_7362#1 GGATGCGCTCAC-----TTTGTTCCAAGAAATGA----ACGAAACTGGAATGAGACCAGA 1665
consensus_7362#2 GGATTTGCTCAGGAGGATGGGTGCCAATGTGCCATGCCACAGCGCCGGAAAGTGAATTTG 641
**** ***** * ** **** * ** * **** * **
consensus_7362#0 T-CATGCCACATTTGCTTCTCTTTTGTCTGCTCTAAGCCATTCTGGTCTTGTGGAGGAAG 1297
consensus_7362#1 T-CATGCCACATTTGCTTCTCTTTTGTCTGCTCTAAGCCATTCTGGTCTTGTGGAGGAAG 1724
consensus_7362#2 TGCAAGCCGAACCTGATTGGTTACTTCTCTTGCTGGATCATGC-AGAAGTGCAGAACCGC 700
* ** *** * ** ** * * ** *** * * ** **
consensus_7362#0 GGAAACTATGGTTTGGTCGCATGGTTAATCACTTCAAG-ATCACACCTGCTGAGAAACAC 1356
consensus_7362#1 GGAAACTATGGTTTGGTCGCATGGTTAATCACTTCAAG-ATCACACCTGCTGAGAAACAC 1783
consensus_7362#2 AGATGATATCACTTACCCTCATGTT--GCTACGGCGAGCATGGCACTTGCGGAATGGGAT 758
** *** ** * **** * ** * ** ** *** *** ** *
consensus_7362#0 TATGTCTGTCTAGTTGATCTTTTAGCACGTTCCGGTCTTGTGGAAGAAGCCAGTGACCTG 1416
consensus_7362#1 TATGTCTGTCTAGTTGATCTTTTAGCACGTTCCGGTCTTGTGGAAGAAGCCAGTGACCTG 1843
consensus_7362#2 TGAGTTCCTCTG--CAGTCGACTGCAGAGTGCCATCGTCACTGACATGT----------- 805
* ** *** ** * ** ** * **
consensus_7362#0 CTCACATCAATGAAAGCTGAGCCAACCGTTGCCATTTGGGTTGCTCTACTTTCAGGCTGT 1476
consensus_7362#1 CTCACATCAATGAAAGCTGAGCCAACCGTTGCCATTTGGGTTGCTCTACTTTCAGGCTGT 1903
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CTGAATAACAAGAAGCTGGAGCTTGGAGAAAGTATAGCAGACAATATCCTTGAATTGCAA 1536
consensus_7362#1 CTGAATAACAAGAAGCTGGAGCTTGGAGAAAGTATAGCAGACAATATCCTTGAATTGCAA 1963
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CCTGACGATGTTGGCGTTCTTGCGTTGGTCTCAAATCTCTATGCTGCTACAAAGAAATGG 1596
consensus_7362#1 CCTGACGATGTTGGCGTTCTTGCGTTGGTCTCAAATCTCTATGCTGC------------- 2010
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 GACAAAGTCAGACAAGTTAGAAAGCTAATGAAAGATTCTGGAAGCAAGAAGATGCCTGGC 1656
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 TGTAGCTCAATAGAGATACGCGGAACACGCCACGTGTTCGTGATGGAAGACCAGAGCCAT 1716
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CCTCAGCGTGAAGAGATCGTAAGTAAGGTGGCAAAGCTTGATTTAGAGATGAGGAAGATG 1776
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 GGCTACATTCCGAGAACAGAGTTTGTGTACCACGATCTGGAGGAGGAAGTGAAGGAACAG 1836
consensus_7362#1 -------------------------------ACGATCTGGAGGAGGAAGTGAAGGAACAG 2039
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CAGCTCAGCTACCACAGCGAGAGGCTGGCCATCGCCTTCGGTTTGCTGAACACAGGCCCA 1896
consensus_7362#1 CAGCTCAGCTACCACAGCGAGAGGCTGGCCATCGCCTTCGGTTTGCTGAACACAGGCCCA 2099
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 GGAACAAGGCTTGTGATCATAAAGAACCTCAGGGTCTGTGGTGATTGCCATGATGCCATC 1956
consensus_7362#1 GGAACAAGGCTTGTGATCATAAAGAACCTCAGGGTCTGTGGTGATTGCCATGATGCCATC 2159
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 AAGTACATCTCGAAGATCGCGGACCGGGAGATCGTAGTGCGAGACGCCAAACGCTTCCAC 2016
consensus_7362#1 AAGTACATCTCGAAGATCGCGGACCGGGAGATCGTAGTGCGAGACGCCAAACGCTTCCAC 2219
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CATTTCAAAGACGGAGTCTGCTCCTGCAGAGATTACTGGTGATGAAGGCTACCGAGAACC 2076
consensus_7362#1 CATTTCAAAGACGGAGTCTGCTCCTGCAGAGATTACTGGTGATGAAGGTAGC--AGTTTC 2277
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 AGCATGGCAAGAGGATGCGTGTTGCTGTATGTATACCCAACTGATCCCCCTAGGCGGGGA 2136
consensus_7362#1 AT---------------------------------------------------------- 2279
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CCATCAGAAGAAGTTCAGCCACGCAAGGCGGCCACGTCCGTCCGTCCGTCACGGGGGACC 2196
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CGGCGGCGTGGTAGTGGTGCGGTGCCCGTCGCCTTCGCCATTCCCGGCCGCGGGCGTCAT 2256
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CTGTCGCGGCGAAAACGACCCGGGAGGTGGCGGCAAAGGCTTTTGCTTCCTACCCGCTGG 2316
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 GGCGCGCGCGTCGCCGTGATCGGTACGAATCTCGCGGGGGGAAGTGGTGGTGGCCCAGAC 2376
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 AGATCGTGATAACGTTGGACTTTGCGCGCAGGTCGCGTTGGTTGGAGTGGTTTGCGGTCT 2436
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 AGGACACTTGCTTTTTTCCCCAGTAGGATGATCACCCAAGACCGCTGCACTGCACCTGCC 2496
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CCATGTGGGAGCAGCATCCAGCATGGCCAGTTCGCAACGCTACACCGGGAGGAAGCAAAA 2556
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 AGGTTTCTTCGCCGTTGACTTATTACGGGTGTGGCCAGAAGAAATTCGGCGTTTGGTTTG 2616
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CTGTGCATATGTGTGAGCCATGGTAGTTACATGCTGTTTCTGTTTCCACTGGTATAGTGG 2676
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 TATTGCCCGTTTCGGTCCCAGGTGAGTCTGAACTCTGAAGACCATTTTATCTTTCACAAG 2736
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 ATTCTGTAATAATCTGGTTGGTGGATGAAGGCAGTGTTTTCATAAAAGATTCATTAATTT 2796
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CGTGGTGGGATTTAGTGTGTCCAGTGTAATCATACAGGGTTCATCTCACTGTCTGCCAAC 2856
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 CTTTGTGTTCTAATTTGAAAAGAAACGAATTGATATTAGGTTTTTTTTTTCCTTAACAAA 2916
consensus_7362#1 ------------------------------------------------------------
consensus_7362#2 ------------------------------------------------------------
consensus_7362#0 AAAGTACCGAA 2927
consensus_7362#1 -----------
consensus_7362#2 -----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||