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Oryza sativa
cluster # 7393 cluster # 7393       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7393#0 length = 1725 sequences # 4  

consensusID : consensus_7393#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1725
fasta sequence
                              [CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCAAAGACAGGCTCATGGTTGAACAGGTTCATCGGCCGAGCAAAGAAACCAGAAATGAGATGGCCATACCCATTTTCAGAGGGGAAGATGTTTGTTCTTACCATCCAAGCTGGTATCGAAGGATATCACGTTAGCGTGGGAGGCCGTCATGTTGCCTCATTTCCTCATAGGATGGGATTCTCTCTTGAAGATGCCACAGGTTTAGCTGTGACAGGCGGCGTAGACGTTCACTCTATATATGCAACCTCTCTTCCAAAGGTCCATCCTAGTTTCTCTCTCCAGCAGGTCTTGGAAATGTCTGATAGGTGGAAGGCTCGCCCAGTACCAGAGGAACCAATTCAGGTTTTTATTGGCATAATCTCTGCTACAAACCATTTTGCTGAGCGCATGGCTATAAGAAAAAGCTGGATGCAGTTCCCTGCCATCCAACTGGGAAATGTGGTTGCTCGGTTCTTTGTTGCACTGAGTCATAGAAAAGAGATAAATGCAGCACTTAAGACAGAAGCAGATTATTTTGGAGATTTTGTCATTCTGCCATTTATTGACCGATATGAGCTGGTGGTTCTGAAAACAGTCGCAATATGTGAATTTGGGGTGCAAAATGTAACCGCAGAGTATATCATGAAATGTGATGATGACACCTTTGTGAGGCTGGATGTAGTATTGAAACAGATCTCCGTCTACAACAGAACCATGCCTCTTTATATGGGTAACCTAAACCTGTTACACAGACCTCTCCGGCATGGTAAATGGGCTGTGACGTACGAGGAATGGCCAGAATTTGTGTATCCTCCATATGCCAATGGACCAGGCTATGTTATTTCAATCGACATTGCAAGAGACATCGTATCACGCCATGCAAATCACTCCCTAAGGTTGTTCAAGATGGAAGATGTGAGCATGGGCATGTGGGTCGAAGACTTCAACACCACCGCGCCAGTTCAGTACATTCACAGCTGGAGGTTCTGCCAGTTCGGCTGCGTGCATAACTACTTCACGGCGCATTACCAGTCACCTTGGCAAATGCTGTGCCTCTGGAACAAACTGTCATCAGGCCGAGCACACTGCTGTAACTACAGATGACGCTCACTCATCCACTCCTTCGATTTCACAACTGACAGCAGGCAACATCGATCGATCCCCCCATGAAGGCAATATTTTGTGCCGCGCATACATGGACCAGGGTCTCCATTTGCTTGACCTGAATTCGTCTTGCTCGACTGACAGCGGATACCATTTCACAGGAGCTCTTCTACGCCAAGATAAGTATTATATCGGTGGGATATTTACTGCTTCACCTCCCGGAGCTCATGTGGTATATATCTAGGAGTACCATACAGCTGTGTTTGGGTGATTGAGGTGAATGCGAATGTGGGTGGGGAAATGAAAGCCTGAGGCAGGGACAGAAATCACATTTGCATTTTAGCTGCTAGAAGTACGGTACAGGGGCAAAGCATTTTCTTGTCTGCTATTTATGCACTAACTGGAGGTGGACAGTTTTGGATGAGATTATATCATTTCTTTTGTTGGTTGTATGCCAGTATGTGCTGGTTCTTTGAATGTGCCAACTTTATAGCAGTGCAAA]

[+] EMBL AK111213             [CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCAAAGACAGGCTCATGGTTGAACAGGTTCATCGGCCGAGCAAAGAAACCAGAAATGAGATGGCCATACCCATTTTCAGAGGGGAAGATGTTTGTTCTTACCATCCAAGCTGGTATCGAAGGATATCACGTTAGCGTGGGAGGCCGTCATGTTGCCTCATTTCCTCATAGGATGGGATTCTCTCTTGAAGATGCCACAGGTTTAGCTGTGACAGGCGGCGTAGACGTTCACTCTATATATGCAACCTCTCTTCCAAAGGTCCATCCTAGTTTCTCTCTCCAGCAGGTCTTGGAAATGTCTGATAGGTGGAAGGCTCGCCCAGTACCAGAGGAACCAATTCAGGTTTTTATTGGCATAATCTCTGCTACAAACCATTTTGCTGAGCGCATGGCTATAAGAAAAAGCTGGATGCAGTTCCCTGCCATCCAACTGGGAAATGTGGTTGCTCGGTTCTTTGTTGCACTGAGTCATAGAAAAGAGATAAATGCAGCACTTAAGACAGAAGCAGATTATTTTGGAGATTTTGTCATTCTGCCATTTATTGACCGATATGAGCTGGTGGTTCTGAAAACAGTCGCAATATGTGAATTTGGGGTGCAAAATGTAACCGCAGAGTATATCATGAAATGTGATGATGACACCTTTGTGAGGCTGGATGTAGTATTGAAACAGATCTCCGTCTACAACAGAACCATGCCTCTTTATATGGGTAACCTAAACCTGTTACACAGACCTCTCCGGCATGGTAAATGGGCTGTGACGTACGAGGAATGGCCAGAATTTGTGTATCCTCCATATGCCAATGGACCAGGCTATGTTATTTCAATCGACATTGCAAGAGACATCGTATCACGCCATGCAAATCACTCCCTAAGGTTGTTCAAGATGGAAGATGTGAGCATGGGCATGTGGGTCGAAGACTTCAACACCACCGCGCCAGTTCAGTACATTCACAGCTGGAGGTTCTGCCAGTTCGGCTGCGTGCATAACTACTTCACGGCGCATTACCAGTCACCTTGGCAAATGCTGTGCCTCTGGAACAAACTGTCATCAGGCCGAGCACACTGCTGTAACTACAGATGACGCTCACTCATCCACTCCTTCGATTTCACAACTGACAGCAGGCAACATCGATCGATCCCCCCATGAAGGCAATATTTTGTGCCGCGCATACATGGACCAGGGTCTCCATTTGCTTGACCTGAATTCGTCTTGCTCGACTGACAGCGGATACCATTTCACAGGAGCTCTTCTACGCCAAGATAAGTATTATATCGGTGGGATATTTACTGCTTCACCTCCCGGAGCTCATGTGGTATATATCTAGGAGTACCATACAGCTGTGTTTGGGTGATTGAGGTGAATGCGAATGTGGGTGGGGAAATGAAAGCCTGAGGCAGGGACAGAAATCACATTTGCATTTTAGCTGCTAGAAGTACGGTACAGGGGCAAAGCATTTTCTTGTCTGCTATTTATGCACTAACTGGAGGTGGACAGTTTT                                                                                    ]
[+] EMBL CB681746             [                                                                                                                                      aaagaaaCAAAGACAGGCTCATGGTTGAACAGGTTCATCGGCCGAGCAAAGAAACCAGAAATGAGATGGCCATACCCATTTTCAGAGGGGAAGATGTTTGTTCTTACCATCCAAGCTGGTATCGAAGGATATCACGTTAGCGTGGGAGGCCGTCATGTTGCCTCATTTCCTCATAGGATGGGATTCTCTCTTGAAGATGCCACAGGTTTAGCTGTGACAGGCGGCGTAGACGTTCACTCTATATATGCAACCTCTCTTCCAAAGGTCCATCCTAGTTTCTCTCTCCAGCAGGTCTTGGAAATGTCTGATAGGTGGAAGGCTCGCCCAGTACCAGAGGAACCAATTCAGGTTTTTATTGGCATAATCTCTGCTACAAACCATTTTGCTGAGCGCATGGCTATAAGAAAAAGCTGGATGCAGTTCCCTGCCATCCAACTGGGAAATGTGGTTGCTCGGTTCTTTGTTGCACTGAGTCATAGAAAAGAGATAAATGCAGCACTTAAGACAGAAGCAGATTATTTTGGAGATGTTGTCATTCTGCCATTTATTGACCGATATGAGCTGGTGGTTCTGAAAACAGTCGCAATATGTGAATTTGGGGTGCAAAATGTAACCGCAGAGTATATCATGAAATGTGATGATGACACCTTTGTGAGGCTGGATGTAGTATTGAAACAGATCTCCGTCTACAACAGAACCATGCCTCTTTATATGGGTAACCTAAACCTGTTACACAGACCTCTCCGGCATGGTAAATGGGCTGTGACGTACGAGGAATGGCCAGAATTTGTGTATCCTCCATATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C27582               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATCACTCCCTAAGGTTGTTCAAGATGGAAGATGTGAGCATGGGCATGTNGGTCGAAGNTGTCAACACCACCGCGCCAGTTCAGTACATTCACAGCTGGAGGTTCTGCCAGTTCGGCTGCGTGCATAACTACTTCACGGCGCATTACCAGTCACCTTGGCAAATGCTGTG CTCTGGAACAAACTGTCATCAGGCCGAGCACACTTCTGTAACTACAGATGACGCTCACTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB681747             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTGAGCATGGGCATGTGGGTTGAAGACTTCAACACCACCGCGCCAGTTCAGTACATTCACAGCTGGAGGTTCTGCCAGTTCGGCTGCGTGCATAACTACTTCACGGCGCATTACCAGTCACCTTGGCAAATGCTGTGCCTTTGGAACAAACTGTCATCAGGCCGAGCACACTGCTGTAACTACAGATGACGCTCACTCATCCACTCCTTTGATTTCACAACTGACAGCAGGCAACATCGATCGATCCCCCCATGAAGGCAATATTTTGTGCCGCGCATACATGGACCAGGGTTTCCATTTGCTTGACCTGAATTCGTCTTGCTCGACTGACAGCGGATACCATTTCACAGGAGCTTTTTTACGCCAAGATAAGTATTATATCGGTGGGATATTTACTGCTTCACCTCCCGGAGCTCATGTGGTATATATTTAGGAGTACCATACAGCTGTGTTTGGGTGATTGAGGTGAATGCGAATGTGGGTGGGGAAATGAAAGCCTGAGGCAGGGACAGAAATCACATTTGCATTTTAGCTGCTAGAAGTACGGTACAGGGGCAAAGCATTTTTTTGTCTGCTATTTATGCACTAACTGGAGGTGGACAGTTTTGGATGAGATTATATCATTTCTTTTGTTGGTTGTATGCCAGTATGTGCTGGTTCTTTGAATGTGCCAACTTTATAGCAGTGCAAA]


>consensus_7393#0 CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTAC TATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACC CTGTTGAGCTTGACTCTAGTCCAAAGACAGGCTCATGGTTGAACAGGTTCATCGGCCGAG CAAAGAAACCAGAAATGAGATGGCCATACCCATTTTCAGAGGGGAAGATGTTTGTTCTTA CCATCCAAGCTGGTATCGAAGGATATCACGTTAGCGTGGGAGGCCGTCATGTTGCCTCAT TTCCTCATAGGATGGGATTCTCTCTTGAAGATGCCACAGGTTTAGCTGTGACAGGCGGCG TAGACGTTCACTCTATATATGCAACCTCTCTTCCAAAGGTCCATCCTAGTTTCTCTCTCC AGCAGGTCTTGGAAATGTCTGATAGGTGGAAGGCTCGCCCAGTACCAGAGGAACCAATTC AGGTTTTTATTGGCATAATCTCTGCTACAAACCATTTTGCTGAGCGCATGGCTATAAGAA AAAGCTGGATGCAGTTCCCTGCCATCCAACTGGGAAATGTGGTTGCTCGGTTCTTTGTTG CACTGAGTCATAGAAAAGAGATAAATGCAGCACTTAAGACAGAAGCAGATTATTTTGGAG ATTTTGTCATTCTGCCATTTATTGACCGATATGAGCTGGTGGTTCTGAAAACAGTCGCAA TATGTGAATTTGGGGTGCAAAATGTAACCGCAGAGTATATCATGAAATGTGATGATGACA CCTTTGTGAGGCTGGATGTAGTATTGAAACAGATCTCCGTCTACAACAGAACCATGCCTC TTTATATGGGTAACCTAAACCTGTTACACAGACCTCTCCGGCATGGTAAATGGGCTGTGA CGTACGAGGAATGGCCAGAATTTGTGTATCCTCCATATGCCAATGGACCAGGCTATGTTA TTTCAATCGACATTGCAAGAGACATCGTATCACGCCATGCAAATCACTCCCTAAGGTTGT TCAAGATGGAAGATGTGAGCATGGGCATGTGGGTCGAAGACTTCAACACCACCGCGCCAG TTCAGTACATTCACAGCTGGAGGTTCTGCCAGTTCGGCTGCGTGCATAACTACTTCACGG CGCATTACCAGTCACCTTGGCAAATGCTGTGCCTCTGGAACAAACTGTCATCAGGCCGAG CACACTGCTGTAACTACAGATGACGCTCACTCATCCACTCCTTCGATTTCACAACTGACA GCAGGCAACATCGATCGATCCCCCCATGAAGGCAATATTTTGTGCCGCGCATACATGGAC CAGGGTCTCCATTTGCTTGACCTGAATTCGTCTTGCTCGACTGACAGCGGATACCATTTC ACAGGAGCTCTTCTACGCCAAGATAAGTATTATATCGGTGGGATATTTACTGCTTCACCT CCCGGAGCTCATGTGGTATATATCTAGGAGTACCATACAGCTGTGTTTGGGTGATTGAGG TGAATGCGAATGTGGGTGGGGAAATGAAAGCCTGAGGCAGGGACAGAAATCACATTTGCA TTTTAGCTGCTAGAAGTACGGTACAGGGGCAAAGCATTTTCTTGTCTGCTATTTATGCAC TAACTGGAGGTGGACAGTTTTGGATGAGATTATATCATTTCTTTTGTTGGTTGTATGCCA GTATGTGCTGGTTCTTTGAATGTGCCAACTTTATAGCAGTGCAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)