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Oryza sativa
cluster # 7410 cluster # 7410       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7410#0 length = 1224 sequences # 4  

consensusID : consensus_7410#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1224
fasta sequence
                              [TAAAGAAACTTGAGCTCGCCAAGTGGAGAAAGGAGAGGTGGAGGAGAGGAGGGGAGGGGAGGGGAGGTGAGGGACGGAGCTGGTGGGTATGACGTCCGGGGCGGCGGCGGCGGGGAGGACGCCGACGTGGAAGGAGAGGGAGAACAACAAGAGGCGGGAGCGGCGGCGGCGTGCCATCGCCGCCAAGATCTTCACGGGGCTCCGGGCGCTCGGGAACTA-CAACCTCCCCAAGCACTGCGACAACAACGAGGTGCTCAAGGCGCTCTGCCGCGAGGCCGGCTGGGTTGTCGAGGACGACGGCACCACCTACCGCAAGGGATGTAAGCCGCCGCCATCGTCGGCTGGGGGAGCGTCGGTGGGGATGAGCCCCTGCTCGTCAACGCAGCTGCTGAGCGCGCCGTCGTCGTCGTTCCCGAGCCCGGTGCCGTCGTACCACGCGAGCCCGGCGTCGTCGAGCTTCCCGAGCCCCAGCCGGATCGACAACCCGAGCGCCTCCTGCCTCCTCCCGTTCCTCCGGGGGCTCCCCAACCTC-CCGCCGCTCCGCGTCTCCAGCAGCGCGCCCGTCACGCCGCCGCTCTCGTCGCCGACGGCGTCGCGGCCGCCCAAGATCAGGAAGCCGGACTGGGACGTCGACCCGTTCCGGCACCCCTTCTTCGCGGTCTCCGCGCCGGCGAGCCCCACCCGCGGCCGCCGCCTCGAGCACCCGGACACGATACCGGAGTGCGACGAGTCCGACGTCTCCACGGTGGACTCCGGCCGGTGGATCAGCTTCCAGATGGCCACGACGGCGCCGACGTCGCCCACCTACAACCTCGTCAACCCGGGCGCCTCCACCTCCAACTCCATGGAGATAGAAGGGACGGCCGGCCGAGGCGGCGCGGAGTTCGAGTTCGACAAGGGGAGGGTGACGCCATGGGAGGGCGAGAGGATCCACGAGGTCGCCGCCGAGGAGCTCGAGCTCACGCTCGGCGTCGGCGCGAAATGACGGCCATTATTGCCGAGCAAAAAAGATGGTTCCTTTCGTGGACCTCGAGCACCAGCTGATCATGGTTGTTGTTAGATCAGTACTGGTCAATGTGTATGATCATGACTACGCATCGATGCTGCGATTTGGGCGATTTCATTCTAGCCTTAGGTTAATCTTGTTGTTCAATTCATTCTTCCTGGACTTGGGAAAAAGGAAGCAGGGAAAAATTGTTCATCACGGCTGATTTTATTCACGGC]

[+] EMBL AU076221             [TAAAGAAACTTGAGCTCGCCAAGTGGAGAAAGGAGAGGTGGAGGAGAGGAGGGGAGGGGAGGGGAGGTGAGGGACGGAGCTGGTGGGTATGACGTCCGGGGCGGCGGCGGCGGGGAGGACGCCGACGTGGAAGGAGAGGGAGAACAACAAGAGGCGGGAGCGGCGGCGGCGTGCCATCGCCGCCAAGATCTTCACGGGGCTCCGGGCGCTCGGGAACTA CAACCTCCCCAAGCACTGCGACAACAACGAGGTGCTCAAGGCGCTCTGCCGCGAGGNCGGCTGGGTTGTCGAGGACGACGGCACCACCTACCGCAAGGGATGTAAGCCGCCGCCATCGTCGGCTGGGGGAGCGTCGGTAGGGATGAGCCCCTGCTCGTCAACGCAGCTGCTGAGCGCGCCGTCGTCGTCGTTCCCGAGCCCGGTGCCGTCGTACCACGCGAGCCCGGCGTCGTCGAGCTTCCCGAGCCCCAACCGGATCGACAACCCGAGCGCCTCCTGCCTCCTCCCGTTCCTCCGGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK106748             [                                     GTGGAGGAGAGGAGGGGAGGGGAGGGGAGGTGAGGGACGGAGCTGGTGGGTATGACGTCCGGGGCGGCGGCGGCGGGGAGGACGCCGACGTGGAAGGAGAGGGAGAACAACAAGAGGCGGGAGCGGCGGCGGCGTGCCATCGCCGCCAAGATCTTCACGGGGCTCCGGGCGCTCGGGAACTA CAACCTCCCCAAGCACTGCGACAACAACGAGGTGCTCAAGGCGCTCTGCCGCGAGGCCGGCTGGGTTGTCGAGGACGACGGCACCACCTACCGCAAGGGATGTAAGCCGCCGCCATCGTCGGCTGGGGGAGCGTCGGTGGGGATGAGCCCCTGCTCGTCAACGCAGCTGCTGAGCGCGCCGTCGTCGTCGTTCCCGAGCCCGGTGCCGTCGTACCACGCGAGCCCGGCGTCGTCGAGCTTCCCGAGCCCCAGCCGGATCGACAACCCGAGCGCCTCCTGCCTCCTCCCGTTCCTCCGGGGGCTCCCCAACCTC CCGCCGCTCCGCGTCTCCAGCAGCGCGCCCGTCACGCCGCCGCTCTCGTCGCCGACGGCGTCGCGGCCGCCCAAGATCAGGAAGCCGGACTGGGACGTCGACCCGTTCCGGCACCCCTTCTTCGCGGTCTCCGCGCCGGCGAGCCCCACCCGCGGCCGCCGCCTCGAGCACCCGGACACGATACCGGAGTGCGACGAGTCCGACGTCTCCACGGTGGACTCCGGCCGGTGGATCAGCTTCCAGATGGCCACGACGGCGCCGACGTCGCCCACCTACAACCTCGTCAACCCGGGCGCCTCCACCTCCAACTCCATGGAGATAGAAGGGACGGCCGGCCGAGGCGGCGCGGAGTTCGAGTTCGACAAGGGGAGGGTGACGCCATGGGAGGGCGAGAGGATCCACGAGGTCGCCGCCGAGGAGCTCGAGCTCACGCTCGGCGTCGGCGCGAAATGACGGCCATTATTGCCGAGCAAAAAAGATGGTTCCTTTCGTGGACCTCGAGCACCAGCTGATCATGGTTGTTGTTAGATCAGTACTGGTCAATGTGTATGATCATGACTACGCATCGATGCTGCGATTTGGGCGATTTCATTCTAGCCTTAGGTTAATCTTGTTGTTCAATTCATTCTTCCTGGACTTGGGAAAAAGGAAGCAGGGAAAAATTGTTCATCACGGCTGATTTTATTCACGGC]
[+] EMBL AU095568             [                                                                            GAGCTGNTGGGTATGACGTCCGGGGCGGCGGCGGCGGNGAGGACGCCGACGTGGAAGGAGAGGGAGAACAACAAGAGGCGGGAGCGGCGGCGGCGTGCCATCGCCGCCAAGATCTTCACGGGGCTCCGGGCGCTCGGGAACTA CAACCTCCCCAAGCACTGCGACAACAACGAGGTGCTCAAGGCGCTCTGCCGCGAGGCCGGCTGGGTTGTCGAGGACGACGGCACCACCTACCGCAAGGGATGTAAGCCGCCGCCATCGTCGGCTGGGGGAGCGTCGGTGGGGATGAGCCCCTGCTCGTCAACGCAGCTGCTGAGCGCGCCGTCGTCGTCGTTCCCGAGCCCGGTGCCGTCGTACCACGCGAGCCCGGCGTCGTCGAGCTTCCCGAGCCCCAGCCGGATCGACAACCCGAGCGCCTCCTGCCTCCTCCCGTTCCTCCGGGGGCTCCCCAACCTCNCCGC  NTCCGCGTCTCCAGCAGCGCGCCCGTCACGCCGCCGCTCTCGTCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BE040911             [                                                                                                                 GGAGGACGCCGACGTGGAAGGAGAGGGAGAACAACAAGAGGCGGGAGCGGCGGCGGCGTGCCATCGCCGCCAAGATCTTCACGGGGCTCCGGGCGCTCGGGAACTACCAACCTCCCCAAGCACTGCGACAACAACGAGGTGCTCAAGGCGCTCTGCCGCGAGGCCGGCTGGGTCGTCGAGGACGACGGCACCACCTACCGCAAGGGATGTAAGCCGCCGCCATCGTCGGCTGGGGGAGCGTCGGTGGGGATGAGCCCCTGCTCGTCAACGCAGCTGCTGAGCGCGCCGTCGTCGTCGTTCCCGAGCCCGGTGCCGTCGTACCACGCGAGCCCGGCGTCGTCGAGCTTCCCGAGCCCCAGCCGGATCGACAACCCGAGCGCCTCCTGCCTCCTCCCGTTCCTCCGGGGGCTCCCCAACCTC CCGCCGCTCCGCGTTTNCAGCAGCGCGCCCGTCACGCCACCGCTCTCGTCGCCGACGGCGTCGCGGGCGCCCAAGATCAGGAAG CGGACTGAGACGTCGACCCCGTCCGGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_7410#0 TAAAGAAACTTGAGCTCGCCAAGTGGAGAAAGGAGAGGTGGAGGAGAGGAGGGGAGGGGA GGGGAGGTGAGGGACGGAGCTGGTGGGTATGACGTCCGGGGCGGCGGCGGCGGGGAGGAC GCCGACGTGGAAGGAGAGGGAGAACAACAAGAGGCGGGAGCGGCGGCGGCGTGCCATCGC CGCCAAGATCTTCACGGGGCTCCGGGCGCTCGGGAACTACAACCTCCCCAAGCACTGCGA CAACAACGAGGTGCTCAAGGCGCTCTGCCGCGAGGCCGGCTGGGTTGTCGAGGACGACGG CACCACCTACCGCAAGGGATGTAAGCCGCCGCCATCGTCGGCTGGGGGAGCGTCGGTGGG GATGAGCCCCTGCTCGTCAACGCAGCTGCTGAGCGCGCCGTCGTCGTCGTTCCCGAGCCC GGTGCCGTCGTACCACGCGAGCCCGGCGTCGTCGAGCTTCCCGAGCCCCAGCCGGATCGA CAACCCGAGCGCCTCCTGCCTCCTCCCGTTCCTCCGGGGGCTCCCCAACCTCCCGCCGCT CCGCGTCTCCAGCAGCGCGCCCGTCACGCCGCCGCTCTCGTCGCCGACGGCGTCGCGGCC GCCCAAGATCAGGAAGCCGGACTGGGACGTCGACCCGTTCCGGCACCCCTTCTTCGCGGT CTCCGCGCCGGCGAGCCCCACCCGCGGCCGCCGCCTCGAGCACCCGGACACGATACCGGA GTGCGACGAGTCCGACGTCTCCACGGTGGACTCCGGCCGGTGGATCAGCTTCCAGATGGC CACGACGGCGCCGACGTCGCCCACCTACAACCTCGTCAACCCGGGCGCCTCCACCTCCAA CTCCATGGAGATAGAAGGGACGGCCGGCCGAGGCGGCGCGGAGTTCGAGTTCGACAAGGG GAGGGTGACGCCATGGGAGGGCGAGAGGATCCACGAGGTCGCCGCCGAGGAGCTCGAGCT CACGCTCGGCGTCGGCGCGAAATGACGGCCATTATTGCCGAGCAAAAAAGATGGTTCCTT TCGTGGACCTCGAGCACCAGCTGATCATGGTTGTTGTTAGATCAGTACTGGTCAATGTGT ATGATCATGACTACGCATCGATGCTGCGATTTGGGCGATTTCATTCTAGCCTTAGGTTAA TCTTGTTGTTCAATTCATTCTTCCTGGACTTGGGAAAAAGGAAGCAGGGAAAAATTGTTC ATCACGGCTGATTTTATTCACGGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)