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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7421 cluster # 7421       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7421#0 length = 853 sequences # 4  

consensusID : consensus_7421#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 853
fasta sequence
                              [CCGCCCACGCGTCCGCACACCACTCCATTTCTGAGCTCTTCT-AGTTTGAGTGAGAGAGCAGCAGAAGGGAGTAGTGCAAGATGCCGATCCGCAACATCGCCGTGGGGAGCCACCAGGAGGTGTACCACCCGGGTGCACTCAAGGCGGCGTTGGCCGAGTTCATCTCCACCCTCATCTTCGTCTTCGCCGGCCAGGGCTCCGGCATGGCCTTCAGTAAGTCGCCGACCTTAATTTTAACCACCTTGTGTGTTGTCACTGCCACTGCAAATCCACTCCATATACTATGATGATACTACAAAGTCCAGGACTTAATTGTGGACTAGTTTAGCAACGCATGAATTAATCCCTCAAAATAACACAAGACATGTGGGGGAGAAAAAAGTTTGGGAAGATATACAAAACTTTTTTCTCTCCGTCCTTGCAGGAGTGAGAGAAACTAGACGCCGTGCTATGATAATTAAGTTGAAAGAAAATTTTCTTTTGAGAAAAAGTCAAAAGTTCGTGAAATAAAAAGTGGTATGGCTTTTAGGTTGCATGATTGGGCCCAAATGACCGGTTTGCCCTTACTGATTACGTGGACGAAGGGATCTCAGTAGTTCTGTTTCAGTCAATGATGTGGCAGTCACAGACCATGTGCTTGTGCCAAGAACTAGAAGCAAAAAAAAAACTTTTCAGACAAAATAATATGGTTAATTAGAATTAGGAGCATAAATTGTTTCCAAACTCCATAGCTTAGCAATTGCTCAAACATATTATTTTACAACGAAATACTGAAGGGTTAAATAATATATATTTTTTTCAGAGTAGCAAAATCCACTAGCTTAGTTAAAGCAAAGAGTAATACAATCAGTAA]

[+] EMBL OSS4017A             [CCGCCCACGCGTCCGCACACCACTCCATTTCTGAGCTCTTCT AGTTTGAGTGAGAGAGCAGCAGAAGGGAGTAGTGCAAGATGCCGATCCGCAACATCGCCGTGGGGAGCCACCAGGAGGTGTACCACCCGGGTGCACTCAAGGCGGCGTTGGCCGAGTTCATCTCCACCCTCATCTTCGTCTTNGGCGGCCAAGGCTCCGGCATGGCt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C72267               [                       TCCATTTCTGAGCTCTTCT AGTTTGAGTGAGAGAGCAGCAGAAGGGAGTAGTGCAAGATGCCGATCCGCAACATCGCCGTGGGGAGCCACCAGGAGGTGTACCACCCGGGTGCACTCAAGGCGGCGTTGGCCGAGTTCATCTCCACCCTCATCTTCGTCTTCGCCGGCCAGGGCTCCGGCATGGCCTTCAGTAAGTCGCCGACCTTAATTTTAACCACCTTGTGTGTTGTCACTGCCACTGCAAATCCACTCCATATACTATGATGATACTACAAAGTCCAGGACTTAATTGTGGACTAGTTTAGCAACGCATGAATTAATCCCTCAAAATAACACAAGACATGTGGGGGAGAAAAAAGTTTTGGGAGNTATAC AAACTTTTTTCTCTCCGTCCTTGCAGGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB643832             [                          ATTTCTGAGCTCTTCT AGTTTGAGTGAGAGAGCAGCAGAAGGGAGTAGTGCAAGATGCCGATCCGCAACATCGCCGTGGGGAGCCACCAGGAGGTGTACCACCCGGGTGCACTCAAGGCGGCGTTGGCCGAGTTCATCTCCACCCTCATCTTCGTCTTCGCCGGCCAGGGCTCCGGCATGGCCTTCAGTAAGTCGCCGACCTTAATTTTAACCACCTTGTGTGTTGTCACTGCCACTGCAAATCCACTCCATATACTATGATGATACTACAAAGTCCAGGACTTAATTGTGGACTAGTTTAGCAACGCATGAATTAATCCCTCAAAATAACACAAGACATGTGGGGGAGAAAAAAGTTTGGGAAGATATACAAAACTTTTTTCTCTCCGTCCTTGCAGGAGTGAGAGAAACTAGACGCCGTGCTATGATAATTAAGTTGAAAGAAAATTTTCTTTTGAGAAAAAGTCAAAAGTTCGTGAAATAAAAAGTGGTATGGCTTTTAGGTTGCATGATTGGGCCCAAATGACCGGTTTGCCCTTACTGATTACGTGGACGAAGGGATCTCAGTAGTTCTGTTTCAGTCAATGATGTGGCAGTCACAGACCATGTGCTTGTGCCAAGAACTAGAAGCAAAAAAAAAACTTTTCAGACAAAATAATATGGTTAATTAGAATTAGGAGCATAAATTGTTTCCAAACTCCATAGCTTAGCAATTGCTCAAACATATTATTTTACAACGAAATACTGAAGGGTTAAATAATATATATTTTTTTCAGAGTAGCAAAATCCACTAGCTTAGTTAAAGCAAAGAGTAATACAATCAGTAA]
[+] EMBL CB670697             [                                   gTCTTCTCCCTTTGAGTGAGAGAGCAGCAGAAGGGAGTAGTGCAAGATGCCGATCCGCAACATCGCCGTGGGGAGCCACCAGGAGGTGTACCACCCGGGTGCACTCAAGGCGGCGTTGGCCGAGTTCATCTCCACCCTCATCTTCGTCTTCACCGGCCAGGGCTCCGGCATGGCCTTCAGTAAGTCGCCGACCTTAATTTTAACCACCTTGTGTGTTGTCACTGCCACTGCAAATCCACTCCATATACTATGATGATACTACAAAGTCCAGGACTTAATTGTGGACTAGTTTAGCAACGCATGAATTAATCCCTCAAAATAACACAAGACATGTGGGGGAGAAAAAAGTTTGGGAAGATATACAAAACTTTTTTCTCTCCGTCCTTGCAGGAGTGAGAGAAACTATACGCCGTGCTATGATAATTAAGTTGAAAGAAAATTTTCTTTTGAGAAAAAGTCAAAAGTTCGTGAAATAAAAAGTGGTATGGCTTTTAGGTTGCATGATTGGGCCCAAATGACCGGTTTGCCCTTACTGATTACGTGGACGAAGGGATCTCAGTAGTTCTGTTTCAGTCAATGATGTGGCAGTCACAGACCATGTGCTTGTGCCAAGAACTAGAAGC AAAAAAAAACTTTTCAGACAAGATAATATGGTTAATTAGAATTAGGAGCATATATTGTTTCCAAACTCCATAGCTTAGCAAT                                                                                                                 ]


>consensus_7421#0 CCGCCCACGCGTCCGCACACCACTCCATTTCTGAGCTCTTCTAGTTTGAGTGAGAGAGCA GCAGAAGGGAGTAGTGCAAGATGCCGATCCGCAACATCGCCGTGGGGAGCCACCAGGAGG TGTACCACCCGGGTGCACTCAAGGCGGCGTTGGCCGAGTTCATCTCCACCCTCATCTTCG TCTTCGCCGGCCAGGGCTCCGGCATGGCCTTCAGTAAGTCGCCGACCTTAATTTTAACCA CCTTGTGTGTTGTCACTGCCACTGCAAATCCACTCCATATACTATGATGATACTACAAAG TCCAGGACTTAATTGTGGACTAGTTTAGCAACGCATGAATTAATCCCTCAAAATAACACA AGACATGTGGGGGAGAAAAAAGTTTGGGAAGATATACAAAACTTTTTTCTCTCCGTCCTT GCAGGAGTGAGAGAAACTAGACGCCGTGCTATGATAATTAAGTTGAAAGAAAATTTTCTT TTGAGAAAAAGTCAAAAGTTCGTGAAATAAAAAGTGGTATGGCTTTTAGGTTGCATGATT GGGCCCAAATGACCGGTTTGCCCTTACTGATTACGTGGACGAAGGGATCTCAGTAGTTCT GTTTCAGTCAATGATGTGGCAGTCACAGACCATGTGCTTGTGCCAAGAACTAGAAGCAAA AAAAAAACTTTTCAGACAAAATAATATGGTTAATTAGAATTAGGAGCATAAATTGTTTCC AAACTCCATAGCTTAGCAATTGCTCAAACATATTATTTTACAACGAAATACTGAAGGGTT AAATAATATATATTTTTTTCAGAGTAGCAAAATCCACTAGCTTAGTTAAAGCAAAGAGTA ATACAATCAGTAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)