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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7436 cluster # 7436       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7436#0 length = 755 sequences # 4  

consensusID : consensus_7436#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 755
fasta sequence
                              [CACCCACCGTTGCCCCGGTCAATCCGCCCATTCCGGACCCGCCTCCCAAGTGTCCCCTGGCGTTAATTGAATCTCAAGGCGTGCATTAGTGTCGGTCTTGGCAACCCGCTCTTGAACCACGGCGTGCTGCTCGCAGCTCTCCAGCCTCCCGAGCGACACCGCTGCTGTCTGCCTTTGCGAAGCCAGCCAAGGTTAATGCTCTCGTCAATGTGAACCATGTGAAGGTCATATCCCCGACATCCTTAAAGTATGCGGGAAGGTCTCCGCTGTAGTTTGTGTTTAATAAGTACGTCGAGAGATAGCGTGCATATATATACGTACGTACGTATGTATGTACATGCTATACATAGGTGTGCAGCATATATATATATATATATATATATATATATATATATATGCTGTGTGCTTGCCTCTACATATATACTGTATTAAACTTTTGGACGA-CCCAAATATATATCCGCCAGCAGCATGCGTGCGCGTACGTGCCGTGCTTCATGGAGGTAGGGTCTTAATATCCATATATGTTTAAGAATAATTAAGTTACAGGATCTGGGATTGTGCTATATATGTATGTGTACACACACGTGGCTTGATCATATCATTATGTGTACGTGCTAGAAGATTTGATTGTGTACTGATCTGTGTGTATGCATGCCTGCCGACAAAATCGAAATATAGTGGGTACAAGTGTATGTGATAATATTTCCTCAAAACCCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BI810667             [CACCCACCGTTGCCCCGGTCAATCCGCCCATTCCGGACCCGCCTCCCAAGTGTCCCCTGGCGTTAATTGAATCTCAAGGCGTGCATTAGTGTCGGTCTTGGCAACCCGCTCTTGAACCACGGCGTGCTGCTCGCAGCTCTCCAGCCTCCCGAGCGACACCGCTGCTGTCTGCCTTTGCGAAGCCAGCCAAGGTTAATGCTCTCGTCAATGTGAACCATGTGAAGGTCATATCCCCGACATCCTTAAAGTATGCGGGAAGGTCTCCGCTGTAGTTTGTGTTTAATAAGTACGTCGAGAGATAGCGTGCATATATATACGTACGTACGTATGTATGTACATGCTATACATAGGTGT CACCATATATATATATATATATATATATATATATATATATATGCTGTGTGCTTGCCTCTACATATATACTGTATTAAACTTTTGGACGACCCCAAATATATATCCGCCAGCAGCATGCGTGCGCGTACGTGCCGTGCTTCATGGAGGTAGGGTCTTAATATCCATATATGTTTAAGAATAATTAAGTTACAGGATCTGGGATTGTGCTATAaaaaaaaaa                                                                                                                                                                                     ]
[+] EMBL BM418884             [                                                                                                                                                                                                                              aaGTCATATCCCCGACATCCTTAAAGTATGCGGGAAGGTCTCCGCTGTAGTTTGTGTTTAATAAGTACGTCGAGAGATAGCGTGCATATATATACGTACGTACGTATGTATGTACATGCTATACATAGGTGTGCAGCATATATATATATATATATATATATATATATATATATATGCTGTGTGCTTGCCTCTACATATATACTGTATTAAACTTTTGGACGA CCCAAATATATATCCGCCAGCAGCATGCGTGCGCGTACGTGCCGTGCTTCATGGAGGTAGGGTCTTAATATCCATATATGTTTAAGAATAATTAAGTTACAGGATCTGGGATTGTGCTATATATGTATGTGTACACACACGTGGCTTGATCATATCATTATGTGTACGTGCTAGAAGATTTGATTGTGTACTaaaaaaaa                                                                                                               ]
[+] EMBL BI811190             [                                                                                                                                                                                                                                                                                                           TAGCGTGCATATATATACGTACGTACGTATGTATGTACATGCTATACATAGGTGTGCAGCATATATATATATATATATATATATATATATATATATATGCTGTGTGCTTGCCTCTACATATATACTGTATTAAACTTTTGGACGA CCCAAATATATATCCGCCAGCAGCATGCGTGCGCGTACGTGCCGTGCTTCATGGAGGTAGGGTCTTAATATCCATATATGTTTAAGAATAATTAAGTTACAGGATCTGGGATTGTGCTATATATGTATGTGTACACACACGTGGCTTGATCATATCATTATGTGTACGTGCTAGAAGATTTGATTGTGTACTGATCTGTGTGTATGCATGCCTGCCGACAAAATCGAAATATAGTGGGTACAAGTGTATGTGATAATATTTCCTCAAAA                                          ]
[+] EMBL AU097407             [                                                                                                                                                                                                                                                                                                                                                                                          TATATATATATATATATATGCTGTGTGCTTGCCTCTACATATATACTGTATTAAACTTTTGGACGA CCCAAATATATATCCGCCAGCAGCATGCGTGCGCGTACGTGCCGTGCTTCATGGAGGTAGGGTCTTAATATCCATATATGTTTAAGAATAATTAAGTTACAGGATCTGGGATTGTGCTATATATGTATGTGTACACACACGTGGCTTGATCATATCATTATGTGTACGTGCTAGAAGATTTGATTGTGTACTGATCTGTGTGTATGCATGCCTGCCTACAAAATCAAAATATAGTGGGTACAAGTGTATGTGATAATATTTCCTCATTTCCCTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_7436#0 CACCCACCGTTGCCCCGGTCAATCCGCCCATTCCGGACCCGCCTCCCAAGTGTCCCCTGG CGTTAATTGAATCTCAAGGCGTGCATTAGTGTCGGTCTTGGCAACCCGCTCTTGAACCAC GGCGTGCTGCTCGCAGCTCTCCAGCCTCCCGAGCGACACCGCTGCTGTCTGCCTTTGCGA AGCCAGCCAAGGTTAATGCTCTCGTCAATGTGAACCATGTGAAGGTCATATCCCCGACAT CCTTAAAGTATGCGGGAAGGTCTCCGCTGTAGTTTGTGTTTAATAAGTACGTCGAGAGAT AGCGTGCATATATATACGTACGTACGTATGTATGTACATGCTATACATAGGTGTGCAGCA TATATATATATATATATATATATATATATATATATATGCTGTGTGCTTGCCTCTACATAT ATACTGTATTAAACTTTTGGACGACCCAAATATATATCCGCCAGCAGCATGCGTGCGCGT ACGTGCCGTGCTTCATGGAGGTAGGGTCTTAATATCCATATATGTTTAAGAATAATTAAG TTACAGGATCTGGGATTGTGCTATATATGTATGTGTACACACACGTGGCTTGATCATATC ATTATGTGTACGTGCTAGAAGATTTGATTGTGTACTGATCTGTGTGTATGCATGCCTGCC GACAAAATCGAAATATAGTGGGTACAAGTGTATGTGATAATATTTCCTCAAAACCCTCTC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)