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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7437 cluster # 7437       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7437#0 length = 704 sequences # 4  

consensusID : consensus_7437#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 704
fasta sequence
                              [GTCAACGATACGCCACGTAACGGCATGACA--GTTTTTTTTTTTTTTTTTTTTAA---A-AACGAGACCATGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC-AAAAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGTG-TTGTGCCACGGGT-CAGACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCCTTCTGCGTCACG-TTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCCTCCCGTTGGCGAGCTCCTCTCCTTGCCCAAGGTGGTCAATTTNAGGGTTTAAAAACCGCGGGTTACCNCCNCCTGCGNGGAGGTGTACCCTGAAANGGTCTGCCNTGCNATCGGNNAGGATCCNATGTCTGCTAACTNTGANNGCATTTGNATCCCCNTCAAAAGAACA]

[+] EMBL CF301998             [GTCAACGATACGCCACGTAACGGCATGACATTGTTTTTTTTTTTTTTTTTTTTAATTCAGATCGAGACCATGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC AAAAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGTG TTGTGCCACGGGT CAAACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCCTTCTGCGTCACG TTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCCTCCCGTTGGCGAGCTCCT                                                                                                                                                       ]
[+] EMBL CF300302             [   AACGATACGCTACGTAACGGCATGACA  ATTTTTTTTTTTTTTTTTTTTAA   A AACGCCACCATGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGCAGGTATCAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC  AAAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAGCTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGAT                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF298123             [                 TAACGGCATGACT  GTGTTTTTTTTTTTTTTTTTTAA   G ACCGAGACCATGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATTCATGATACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCACAAAAAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGTG TTGTGCCACGGGT CAGACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCCTTCTGCGTCACG TTGTGCTGCACCAGGAACCCCAAGAACGCCA                                                                                                                                                                                     ]
[+] EMBL BE229126             [                                                                                     ACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC AAAAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGTGTTTGTGCCACGGGTCCAGACAGGTGCTGCAGCAGGTTGTCGAAAGG CCCTTCTGCGTC CGTTTGTGCTGCACCA GAACCC  AGAAAGCCA C TCGCCAG CTCCCGTTG  GAACTCCTCTCCTTGCCCAAGGTGGTCAATTTNAGGGTTTAAAAACCGCGGGTTACCNCCNCCTGCGNGGAGGTGTACCCTGAAANGGTCTGCCNTGCNATCGGNNAGGATCCNATGTCTGCTAACTNTGANNGCATTTGNATCCCCNTCAAAAGAACA]


>consensus_7437#0 GTCAACGATACGCCACGTAACGGCATGACAGTTTTTTTTTTTTTTTTTTTTAAAAACGAG ACCATGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTG TACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGC AGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCT CTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCACAAAAAAAAAAAGAA GAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATC AAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTC TGGATGATGGTGTTGTGCCACGGGTCAGACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCC TTCTGCGTCACGTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCCTCCCG TTGGCGAGCTCCTCTCCTTGCCCAAGGTGGTCAATTTNAGGGTTTAAAAACCGCGGGTTA CCNCCNCCTGCGNGGAGGTGTACCCTGAAANGGTCTGCCNTGCNATCGGNNAGGATCCNA TGTCTGCTAACTNTGANNGCATTTGNATCCCCNTCAAAAGAACA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)