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Oryza sativa
cluster # 745 cluster # 745       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_745#0 length = 1345 sequences # 2  

consensusID : consensus_745#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1345
fasta sequence
                              [TTCCTAATTACTATTATTAGTGTTAAGTATATTAATTAATAGAGATAGTTAAGTATATTAACTAATAGTGTTAACAGAGGTAGTTAATAGGGGAGGAGTGCTCGCTAGCAGCGAGCACGCGCTAGCTAGGAGTCCCCAGCTGAGAGCACACGCAGCTACCAAAACCAAGAATTTTTTTCGGTTTTAGATTTTTTTTAAATATTTACATAAATAATCTATCGGCCAAAAAAATTACAAAAATAAACCCTGTCGCCCACCTCTGGGGCGGCAAGCTAACGTGGCAAACGGGGGAGGAACAGGCGTTGATGGAGGGAGGGTTTTTTGCAGGAAAACCCTTGCCGCCCTCTGGTGGGGCAGCAAGGGGCCCGAATGCAAAAAAGCCAGTCGGGGCTGGCCATTCTGCAGGCGGTCCCTTGCCGCCCTCTAGCCGGGTGGCAGGCCTCGCTGCCTATAAAAGGCTTGCCGCCCAGCCCCCAGCCCTCATTCCTCCCCCCTCAAATCCAGTGAAAAAAAAAAGAAGAGAGGGGAGGAGAAGAGAAGAAGGGGCGAAGCCCTGTCGGATTCAGACGCCGATTTCAGCGTGTAGAATCCGTCGTTTCGGAAGTCCGCGGTCGCGAGGAAAAGAGTTCGGAAGATCAAAGTGAAGAAGCAAGAGATGGCACGTCAGGATACACCTCAGTTGTTGGACCCGGCGATAGATCACCGACACCGGTCTCACCTTACTGCGGTGCAGGGGGCTCAGCTTGGGACGTTCCAGGCACTGCGCCCAGGACTTCGCTCGTGCTGTCGACGACATCAACCGGGTCGTCGTTGACGGTTCAACGACAATCCAACGTTTAGGCGCGGGGATTCCGGTACCCGTAGTGCAGTTCTGGCAGTACACCGGGACTTCGTCACAGGCACCCGGCATGTCGAGTCAGGGTCCACCACTGGACCATGCTAGGACCTTATCGGACCGCTTGCTGCCTTCCACCTTGCTCTTCGACATCACTGACTTCGACTTCGCTTCAGGCTCGACAGAGGACGTCATCGGCCCCTCACAGCTGGGAGGCGCACCGCCGGTGCATACGCAGGACCAGGCGCAGGCCTCTCCTCCGCCAGACACTCGTGCTACCCGTGCTGTGCCACCGGATCGTTTCACCTACTCCCAGGACCACGTGCGAGCACAGGCCCGGAGGACCAAGCGTGGTCGCGGCGCGGGGCAGGGCCAGTAGAGCAGTCTTCTCTTTTTTTATTTGCTTCACTTTCCAGTACTGTATACTTGTGTAATGACTACGTTGTTGTTATATGTGCACGATACCTTTCGGCGTATGCACGACTACTTTCTGCCGCAAACAAAAAAAAA]

[+] EMBL AK109626             [TTCCTAATTACTATTATTAGTGTTAAGTATATTAATTAATAGAGATAGTTAAGTATATTAACTAATAGTGTTAACAGAGGTAGTTAATAGGGGAGGAGTGCTCGCTAGCAGCGAGCACGCGCTAGCTAGGAGTCCCCAGCTGAGAGCACACGCAGCTACCAAAACCAAGAATTTTTTTCGGTTTTAGATTTTTTTTAAATATTTACATAAATAATCTATCGGCCAAAAAAATTACAAAAATAAACCCTGTCGCCCACCTCTGGGGCGGCAAGCTAACGTGGCAAACGGGGGAGGAACAGGCGTTGATGGAGGGAGGGTTTTTTGCAGGAAAACCCTTGCCGCCCTCTGGTGGGGCAGCAAGGGGCCCGAATGCAAAAAAGCCAGTCGGGGCTGGCCATTCTGCAGGCGGTCCCTTGCCGCCCTCTAGCCGGGTGGCAGGCCTCGCTGCCTATAAAAGGCTTGCCGCCCAGCCCCCAGCCCTCATTCCTCCCCCCTCAAATCCAGTGAAAAAAAAAAGAAGAGAGGGGAGGAGAAGAGAAGAAGGGGCGAAGCCCTGTCGGATTCAGACGCCGATTTCAGCGTGTAGAATCCGTCGTTTCGGAAGTCCGCGGTCGCGAGGAAAAGAGTTCGGAAGATCAAAGTGAAGAAGCAAGAGATGGCACGTCAGGATACACCTCAGTTGTTGGACCCGGCGATAGATCACCGACACCGGTCTCACCTTACTGCGGTGCAGGGGGCTCAGCTTGGGACGTTCCAGGCACTGCGCCCAGGACTTCGCTCGTGCTGTCGACGACATCAACCGGGTCGTCGTTGACGGTTCAACGACAATCCAACGTTTAGGCGCGGGGATTCCGGTACCCGTAGTGCAGTTCTGGCAGTACACCGGGACTTCGTCACAGGCACCCGGCATGTCGAGTCAGGGTCCACCACTGGACCATGCTAGGACCTTATCGGACCGCTTGCTGCCTTCCACCTTGCTCTTCGACATCACTGACTTCGACTTCGCTTCAGGCTCGACAGAGGACGTCATCGGCCCCTCACAGCTGGGAGGCGCACCGCCGGTGCATACGCAGGACCAGGCGCAGGCCTCTCCTCCGCCAGACACTCGTGCTACCCGTGCTGTGCCACCGGATCGTTTCACCTACTCCCAGGACCACGTGCGAGCACAGGCCCGGAGGACCAAGCGTGGTCGCGGCGCGGGGCAGGGCCAGTAGAGCAGTCTTCTCTTTTTTTATTTGCTTCACTTTCCAGTACTGTATACTTGTGTAATGACTACGTTGTTGTTATATGTGCACGATAC                                             ]
[+] EMBL BI808320             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccCAGTTCTGCCAGTATACCGGGACTTCGTCACA ACAGCCGGCACGTCGAGTCAGGGTCCACCACTGGACCATGCTGGGACCTCGTCAGACCACTTGGTGGCTTCCGCCTTGCTCTTCGACATCACTGACTTCGACTTCGCTTCAGGCTCGACAGAGGACGTCATCGGCCCCTCACAGCTGGGAGGTGCACCGCCGGTGCAGACGCAGGACCAGGCGCAGGCCACTCCGCCACCAGACACTCGTGCTACCCGTGCTGTGCCACCGGATCGTTTCACCTACTCCCAGGACCACGTGCGAGCATAGGCCCGGAGGACCAAGCGTGGTCGCGGCACGGGGCAGGGCCAGTAGAGCAGACTTCTCTTTGTTTATTTGCTTCACATGCTAGTATTGTATGCTTGTGTAATGAATACATTGTTGTTATATGTGCACGATACCTTTCGGCGTATGCACGACTACTTTCTGCCGCAAACAAAAAAAAA]


>consensus_745#0 TTCCTAATTACTATTATTAGTGTTAAGTATATTAATTAATAGAGATAGTTAAGTATATTA ACTAATAGTGTTAACAGAGGTAGTTAATAGGGGAGGAGTGCTCGCTAGCAGCGAGCACGC GCTAGCTAGGAGTCCCCAGCTGAGAGCACACGCAGCTACCAAAACCAAGAATTTTTTTCG GTTTTAGATTTTTTTTAAATATTTACATAAATAATCTATCGGCCAAAAAAATTACAAAAA TAAACCCTGTCGCCCACCTCTGGGGCGGCAAGCTAACGTGGCAAACGGGGGAGGAACAGG CGTTGATGGAGGGAGGGTTTTTTGCAGGAAAACCCTTGCCGCCCTCTGGTGGGGCAGCAA GGGGCCCGAATGCAAAAAAGCCAGTCGGGGCTGGCCATTCTGCAGGCGGTCCCTTGCCGC CCTCTAGCCGGGTGGCAGGCCTCGCTGCCTATAAAAGGCTTGCCGCCCAGCCCCCAGCCC TCATTCCTCCCCCCTCAAATCCAGTGAAAAAAAAAAGAAGAGAGGGGAGGAGAAGAGAAG AAGGGGCGAAGCCCTGTCGGATTCAGACGCCGATTTCAGCGTGTAGAATCCGTCGTTTCG GAAGTCCGCGGTCGCGAGGAAAAGAGTTCGGAAGATCAAAGTGAAGAAGCAAGAGATGGC ACGTCAGGATACACCTCAGTTGTTGGACCCGGCGATAGATCACCGACACCGGTCTCACCT TACTGCGGTGCAGGGGGCTCAGCTTGGGACGTTCCAGGCACTGCGCCCAGGACTTCGCTC GTGCTGTCGACGACATCAACCGGGTCGTCGTTGACGGTTCAACGACAATCCAACGTTTAG GCGCGGGGATTCCGGTACCCGTAGTGCAGTTCTGGCAGTACACCGGGACTTCGTCACAGG CACCCGGCATGTCGAGTCAGGGTCCACCACTGGACCATGCTAGGACCTTATCGGACCGCT TGCTGCCTTCCACCTTGCTCTTCGACATCACTGACTTCGACTTCGCTTCAGGCTCGACAG AGGACGTCATCGGCCCCTCACAGCTGGGAGGCGCACCGCCGGTGCATACGCAGGACCAGG CGCAGGCCTCTCCTCCGCCAGACACTCGTGCTACCCGTGCTGTGCCACCGGATCGTTTCA CCTACTCCCAGGACCACGTGCGAGCACAGGCCCGGAGGACCAAGCGTGGTCGCGGCGCGG GGCAGGGCCAGTAGAGCAGTCTTCTCTTTTTTTATTTGCTTCACTTTCCAGTACTGTATA CTTGTGTAATGACTACGTTGTTGTTATATGTGCACGATACCTTTCGGCGTATGCACGACT ACTTTCTGCCGCAAACAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)