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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 746 cluster # 746       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_746#0 length = 1007 sequences # 2  

consensusID : consensus_746#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1007
fasta sequence
                              [ATATACCTTTCTCTTTTAAGATAAACAAAATGGCCAATTTGTATCCTTTTACTTCTCCCCTAGATGCTCTTGTATTTGATGTAGTTGCTGATAACAATAAACCATCAGCTCTAGAAACTGAGGCAAATCTTGCTCTTTGGACCAATGCACAATTCACATTTGATGTGCAACCGGGAAGTGGTATCTTGGAGGATAAACCGGATATGACATCGCCCAGCACCACTTCTTCCAGTCCCCTTACCGCCAACACAGCAGCTGCCAGCCCGGAAATTACATACGAAAATTTAGCAAATTATCTGGACTACAAACTCCCTAAGCAACAGCAACAACAACTACAGCTCCAGTCCTTGCAATCGCTTGCAAATTTGTCTAGGCAGGCGCATCAACAAATCCTGTTACCAAAAATTCTTCCAGCTATGACATTAGAGGAAATCACGAAAGCTTTATCGCCCAATACATCCACAAATGATTCAACCGTGAAACCTATCGATACCCAAACCAAAACAAGCGCGCACTTAAAGAGAAGCGCATCTCCAGCTGAAAAAGGACCTGCTGAAGAAGACAAGCGAAGAAGAAACACCGCAGCAAGCGCTCGATTCCGCATCAAGAAGAAGCTGAGAGAACAAACTATGGAAAAAACCGTGCGCGAAATGACAGAAAAGTCCAACGGTCTCGAAGACAGAGTGGAAGAATTGGAGCTTGGAATCAAATGGCTNCGTAGACTGGTGGTGGNAAAAGGCACATCGACGCCCGGACCCGATGGAGATCGATCNCNAAGAAGGGGAANAAGTGCCTGNCATCAAGAGCGACCTNTAATGTATTTAATATGCCATTCTTTTTTTATATATATTCACTTATCATATGCAAACACCTATTTATTTTTTCTGCTTCTAATATGAATTTTTCCCTCTCTTTGTAAATATTATTTTTTTCTCAATTATTTTTAAACATCCCATTATGATCACAATAAATGACTGCAATTGGAATGCATAACAAAAAAAAAAAAA]

[+] EMBL CA766866             [ATATACCTTTCTCTTTTAAGATAAACAAAATGGCCAATTTGTATCCTTTTACTTCTCCCCTAGATGCTCTTGTATTTGATGTAGTTGCTGATAACAATAAACCATCAGCTCTAGAAACTGAGGCAAATCTTGCTCTTTGGACCAATGCACAATTCACATTTGATGTGCAACCGGGAAGTGGTATCTTGGAGGATAAACCGGATATGACATCGCCCAGCACCACTTCTTCCAGTCCCCTTACCGCCAACACAGCAGCTGCCAGCCCGGAAATTACATACGAAAATTTAGCAAATTATCTGGACTACAAACTCCCTAAGCAACAGCAACAACAACTACAGCTCCAGTCCTTGCAATCGCTTGCAAATTTGTCTAGGCAGGCGCATCAACAAATCCTGTTACCAAAAATTCTTCCAGCTATGACATTAGAGGAAATCACGAAAGCTTTATCGCCCAATACATCCACAAATGATTCAACCGTGAAACCTATCGATACCCAAACCAAAACAAGCGCGCACTTAAAGAGAAGCGCATCTCCAGCTGAAAAAGGACCTGCTGAAGAAGACAAGCGAAGAAGAAACACCGCAGCAAGCGCTCGATTCCGCATCAAGAAGAAGCTGAGAGAACAAACTATGGAAAAAACCGTGCGCGAAATGACAGAAAAGTCCAACGGTCTCGAAGACAGAGTGGAAGAATTGGAGCTTGGAATCAAATGGCTNCGTAGACTGGTGGTGGNAAAAGGCACATCGACGCCCGGACCCGATGGAGATCGATCNCNAAGAAGGGGAANAAGTGCCTGNCATCAAGAGCGACCTNT                                                                                                                                                                                                 ]
[-] EMBL CA759360             [                                                                                                                                                                                                                                                                                                                                    acCANCAACTACAGCTCCAGTCCTGNCAATCGCTTGCAAATTTGTCTAGGCAGGCGCATCAACAAATCCTGTTACCAAAAATTCTTCCAGCTATGACATTAGAGGAAATCACGAAAGCTTTATCGCCCAATACATCCACAAATGATTCAACCGTGAAACCTATCGATACCCAAACCAAAACAAGCGCGCACTTAAAGAGAAGCGCATCTCCAGCTGAAAAAGGACCTGCTGAAGAAGACAAGCGAAGAAGAAACNCCGCAGCAAGCGCTCGATTCCGCATCAAGAAGAAGCTGAGAGAACAAACTATGGAAAAAACCGTGCGCGAAATGACAGAAAAGTCCAACGGTCTCGAAGACAGAGTGAAAGAATTGGAGCTTGAAATCAAATGGCTCCGTAGACTGTTGTTGGAAAAGGGCACATCGACG CCGGACACGATGGAGATCGATCGCAAAGAAGGGGAAGAAGTGCCTGCCATCAAGAGCGAACTATAATGTATTTAATATGCCATTCTTTTTTTATATATATTCACTTATCATATGCAAACACCTATTTATTTTTTCTGCTTCTAATATGAATTTTTCCCTCTCTTTGTAAATATTATTTTTTTCTCAATTATTTTTAAACATCCCATTATGATCACAATAAATGACTGCAATTGGAATGCATAACAAAAAAAAAAAAA]


>consensus_746#0 ATATACCTTTCTCTTTTAAGATAAACAAAATGGCCAATTTGTATCCTTTTACTTCTCCCC TAGATGCTCTTGTATTTGATGTAGTTGCTGATAACAATAAACCATCAGCTCTAGAAACTG AGGCAAATCTTGCTCTTTGGACCAATGCACAATTCACATTTGATGTGCAACCGGGAAGTG GTATCTTGGAGGATAAACCGGATATGACATCGCCCAGCACCACTTCTTCCAGTCCCCTTA CCGCCAACACAGCAGCTGCCAGCCCGGAAATTACATACGAAAATTTAGCAAATTATCTGG ACTACAAACTCCCTAAGCAACAGCAACAACAACTACAGCTCCAGTCCTTGCAATCGCTTG CAAATTTGTCTAGGCAGGCGCATCAACAAATCCTGTTACCAAAAATTCTTCCAGCTATGA CATTAGAGGAAATCACGAAAGCTTTATCGCCCAATACATCCACAAATGATTCAACCGTGA AACCTATCGATACCCAAACCAAAACAAGCGCGCACTTAAAGAGAAGCGCATCTCCAGCTG AAAAAGGACCTGCTGAAGAAGACAAGCGAAGAAGAAACACCGCAGCAAGCGCTCGATTCC GCATCAAGAAGAAGCTGAGAGAACAAACTATGGAAAAAACCGTGCGCGAAATGACAGAAA AGTCCAACGGTCTCGAAGACAGAGTGGAAGAATTGGAGCTTGGAATCAAATGGCTNCGTA GACTGGTGGTGGNAAAAGGCACATCGACGCCCGGACCCGATGGAGATCGATCNCNAAGAA GGGGAANAAGTGCCTGNCATCAAGAGCGACCTNTAATGTATTTAATATGCCATTCTTTTT TTATATATATTCACTTATCATATGCAAACACCTATTTATTTTTTCTGCTTCTAATATGAA TTTTTCCCTCTCTTTGTAAATATTATTTTTTTCTCAATTATTTTTAAACATCCCATTATG ATCACAATAAATGACTGCAATTGGAATGCATAACAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)