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Oryza sativa
cluster # 7479 cluster # 7479       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7479#0 length = 1974 sequences # 3  
consensus_7479#1 length = 1543 sequences # 1  

consensusID : consensus_7479#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1974
fasta sequence
                              [CAAAGTCCAAAACCCATAAACCCCCTCTCCCCCACTTCTCCCCCACAAACTAGGGTTTCACTCGCCGCCGCCGCCCCCGCCGCCGCCATGGCCGCCGACACCTCCAAGCCCTTCTTCCCGGCGGCGCCGAACCCCGCCCTCCTCCCCTCCGGCCGCAAGCCCTCCCGCCTCTCCCCGGAGGCCTCCTACTGGCGCTCCTTCCGCGCCTCCGAGCTCACCCCCGCCAACGAGTTCAACGTCACCCACCTCGCCTTCTCCCCCTCGTCGGCCCCCACCCTCGCCGCCTCGTTGTCCACCTCCGTGCTCCTCTTCTCCGGCGACCCGCTCTCCCCGCTCCCCCGCATCCCCGCCTCCCAGGACGTCGCCTTCTCCCCGTCCTTCCGCTCCGACGGCTCCCTCCTCGCCGTCGGCGACAAGAAGGGCGTCGTCCGCGTCTTCCGCGCCGACAAGAAGCAGTCGTCGGGCGCGCTCCGCACGCTCACGGCCCACACCGCCGAGACCCGCGTCGTCCGCTACCCCGTCGCCGGCGGCGACAAGGTCCACCTCTTCACCGCCGGCGACGACGCGCTCCTCGCCTACTGGGACGTGCCATCCGAGACGCCCGTGTTCGCCGCCCCCGCCGCCCACCGCGACTACATCCGCGCCGGCGCCGCGTCCCCCGCCGACCACAACATCTTCGCCACGGGCTCGTACGACCGCATCGTCAAATTGTGGGACGCCCGCATGGGGAAGACGTCGACGCTGTCCTTCTCCCATGGCGAATTGGTGGAGAGCGTGCTGTTCCTGCCGTCCGGCGGGCTGCTGGCGACAGCCGGCGGGAACGTCGTCAGGATTTGGGATGTCATTGGTGGCGGGCGGCTTCTCCACTCGGTGGAGAGCCATGTCAAGACGGTGATGGCCCTCGCGCTCGCCAAGATGACCAACACCGGCGAGACGCGGCTGCTTAGCGCGGGGAGTGATGGTTATGTCAAGAGCTTTGATTATGGCGAGCTTAAGCTCACGCACTCGATGCGATATCCTAAGGAATTGCTTTCCTTGGCGTGCTCGCCGTGTGGGACAGTGCTGGTTGCTGGATCTTCAAAGGGCACAATTTATATGGGTAGGAGGAAAAAGAAGTCGACAGGGGAGGACGAGGAAGAGGGTAAGGGTGTTGGTGGTGAGCTTGATTGGGCACCAACCAAGCCGGAGAAGCGGCGGTTGGCACCGTCCAACTATAGGTACTTCCTCCGTGGACAAAATGCGAAGGCTAAGGAAGGTGACCTTGTGATTGAGAAGCCTAAGAAGGTGAAGGTTGCTGAACACGATAAGTTGCTGAGGAAGTTCAGGCACAAGGATGCTCTAGTTTCAGCGTTAGCTCGAAACAATCCAAGGAGCATAGTGGCGGTGATGGAGGAGCTAGTTTCAAGGAGAAAGCTGGTCAGATGCATCGAGAACTTGGACACGGAAGAACTCGTTCTTCTCCTGCTGTTCCTGCACCGAAATGCAACCTTGCCAAGGTATGCCAGGTTCTTGATGGGGGTGGCAAACAAGGTGCTGGAGATGCGCGCGGATGATATCCGATCAGATGAGAACCTAAGGGGTTGTGTTAGAAATCTTAAGAGGATGGCTGCAGAGGAGATTCAGATACAGCACACATTGCAGGGGATCCAAGGGATGATTTCACCCATGCTTGCACTTGCCAGTAGATGAACAGGTGCTTTTCTTGTATCGGAATTCTTTTTTGGTCTGTT-AGTTTACAGTGA-GGCATGCCACA-TACATG-ATGATGTATG-CTAGTTTACAAACTATT-ATCGCCACTG-AAATTTT-GGCTGTC-ATCCAATC-GATATACTCTGTTGTGCCGCGAAAAGTTTTGATCAGTTCATTCCAGCTATGGTCATGTTTGCACTATGCAGTTTTGCCTTTTGGGTGTTGCTATGGATTGTTCATTGCGCTTGTTAACTATTTTTCAGCTTACTTCGCATGGTTCAGTTTTTGTTC]

[+] EMBL AK111745             [CAAAGTCCAAAACCCATAAACCCCCTCTCCCCCACTTCTCCCCCACAAACTAGGGTTTCACTCGCCGCCGCCGCCCCCGCCGCCGCCATGGCCGCCGACACCTCCAAGCCCTTCTTCCCGGCGGCGCCGAACCCCGCCCTCCTCCCCTCCGGCCGCAAGCCCTCCCGCCTCTCCCCGGAGGCCTCCTACTGGCGCTCCTTCCGCGCCTCCGAGCTCACCCCCGCCAACGAGTTCAACGTCACCCACCTCGCCTTCTCCCCCTCGTCGGCCCCCACCCTCGCCGCCTCGTTGTCCACCTCCGTGCTCCTCTTCTCCGGCGACCCGCTCTCCCCGCTCCCCCGCATCCCCGCCTCCCAGGACGTCGCCTTCTCCCCGTCCTTCCGCTCCGACGGCTCCCTCCTCGCCGTCGGCGACAAGAAGGGCGTCGTCCGCGTCTTCCGCGCCGACAAGAAGCAGTCGTCGGGCGCGCTCCGCACGCTCACGGCCCACACCGCCGAGACCCGCGTCGTCCGCTACCCCGTCGCCGGCGGCGACAAGGTCCACCTCTTCACCGCCGGCGACGACGCGCTCCTCGCCTACTGGGACGTGCCATCCGAGACGCCCGTGTTCGCCGCCCCCGCCGCCCACCGCGACTACATCCGCGCCGGCGCCGCGTCCCCCGCCGACCACAACATCTTCGCCACGGGCTCGTACGACCGCATCGTCAAATTGTGGGACGCCCGCATGGGGAAGACGTCGACGCTGTCCTTCTCCCATGGCGAATTGGTGGAGAGCGTGCTGTTCCTGCCGTCCGGCGGGCTGCTGGCGACAGCCGGCGGGAACGTCGTCAGGATTTGGGATGTCATTGGTGGCGGGCGGCTTCTCCACTCGGTGGAGAGCCATGTCAAGACGGTGATGGCCCTCGCGCTCGCCAAGATGACCAACACCGGCGAGACGCGGCTGCTTAGCGCGGGGAGTGATGGTTATGTCAAGAGCTTTGATTATGGCGAGCTTAAGCTCACGCACTCGATGCGATATCCTAAGGAATTGCTTTCCTTGGCGTGCTCGCCGTGTGGGACAGTGCTGGTTGCTGGATCTTCAAAGGGCACAATTTATATGGGTAGGAGGAAAAAGAAGTCGACAGGGGAGGACGAGGAAGAGGGTAAGGGTGTTGGTGGTGAGCTTGATTGGGCACCAACCAAGCCGGAGAAGCGGCGGTTGGCACCGTCCAACTATAGGTACTTCCTCCGTGGACAAAATGCGAAGGCTAAGGAAGGTGACCTTGTGATTGAGAAGCCTAAGAAGGTGAAGGTTGCTGAACACGATAAGTTGCTGAGGAAGTTCAGGCACAAGGATGCTCTAGTTTCAGCGTTAGCTCGAAACAATCCAAGGAGCATAGTGGCGGTGATGGAGGAGCTAGTTTCAAGGAGAAAGCTGGTCAGATGCATCGAGAACTTGGACACGGAAGAACTCGTTCTTCTCCTGCTGTTCCTGCACCGAAATGCAACCTTGCCAAGGTATGCCAGGTTCTTGATGGGGGTGGCAAACAAGGTGCTGGAGATGCGCGCGGATGATATCCGATCAGATGAGAACCTAAGGGGTTGTGTTAGAAATCTTAAGAGGATGGCTGCAGAGGAGATTCAGATACAGCACACATTGCAGGGGATCCAAGGGATGATTTCACCCATGCTTGCACTTGCCAGTAGATGAACAGGTGCTTTTCTTGTATCGGAATTCTTTTTTGGTCTGTT AGTTTACAGTGA GGCATGCCACA TACATG ATGATGTATG CTAGTTTACAAACTATT ATCGCCACTG AAATTTT GGCTGTC ATCCAATC GATATACTCTGTTGTGCCGCGAAAAGTTTTGATCAGTTCATTCCAGCTATGGTCATGTTTGCACTATGCAGTTTTGCCTTTTGGGTGTTGCTATGGATTGTTCATTGCGCTTGTTAACTATTTTTCAGCTTACTTCGCATGGTTCAGTTTTTGTTC]
[+] EMBL AK099214             [CAAAGTCCAAAACCCATAAACCCCCTCTCCCCCACTTCTCCCCCACAAACTAGGGTTTCACTCGCCGCCGCCGCCCCCGCCGCCGCCATGGCCGCCGACACCTCCAAGCCCTTCTTCCCGGCGGCGCCGAACCCCGCCCTCCTCCCCTCCGGCCGCAAGCCCTCCCGCCTCTCCCCGGAGGCCTCCTACTGGCGCTCCTTCCGCGCCTCCGAGCTCACCCCCGCCAACGAGTTCAACGTCACCCACCTCGCCTTCTCCCCCTCGTCGGCCCCCACCCTCGCCGCCTCGTTGTCCACCTCCGTGCTCCTCTTCTCCGGCGACCCGCTCTCCCCGCTCCCCCGCATCCCCGCCTCCCAGGACGTCGCCTTCTCCCCGTCCTTC  CTCCGACGGCTCCCTCCTCGCCGTCGGCGACAAGAAGGGCGTCGTCCGCGTCTTCCGCGCCGACAAGAAGCAGTCGTCGGGCGCGCTCCGCACGCTCACGGCCCACACCGCCGAGACCCGCGTCGTCCGCTACCCCGTCGCCGGCGGCGACAAGGTCCACCTCTTCACCGCCGGCGACGACGCGCTCCTCGCCTACTGGGACGTGCCATCCGAGACGCCCGTGTTCGCCGCCCCCGCCGCCCACCGCGACTACATCCGCGCCGGCGCCGCGTCCCCCGCCGACCACAACATCTTCGCCACGGGCTCGTACGACCGCATCGTCAAATTGTGGGACGCCCGCATGGGGAAGACGTCGACGCTGTCCTTCTCCCATGGCGAATTGGTGGAGAGCGTGCTGTTCCTGCCGTCCGGCGGGCTGCTGGCGACAGCCGGCGGGAACGTCGTCAGGATTTGGGATGTCATTGGTGGCGGGCGGCTTCTCCACTCGGTGGAGAGCCATGTCAAGACGGTGATGGCCCTCGCGCTCGCCAAGATGACCAACACCGGCGAGACGCGGCTGCTTAGCGCGGGGAGTGATGGTTATGTCAAGAGCTTTGATTATGGCGAGCTTAAGCTCACGCACTCGATGCGATATCCTAAGGAATTGCTTTCCTTGGCGTGCTCGCCGTGTGGGACAGTGCTGGTTGCTGGATCTTCAAAGGGCACAATTTATATGGGTAGGAGGAAAAAGAAGTCGACAGGGGAGGACGAGGAAGAGGGTAAGGGTGTTGGTGGTGAGCTTGATTGGGCACCAACCAAGCCGGAGAAGCGGCGGTTGGCACCGTCCAACTATAGGTACTTCCTCCGTGGACAAAATGCGAAGGCTAAGGAAGGTGACCTTGTGATTGAGAAGCCTAAGAAGGTGAAGGTTGCTGAACACGATAAGTTGCTGAGGAAGTTCAGGCACAAGGATGCTCTAGTTTCAGCGTTAGCTCGAAACAATCCAAGGAGCATAGTGGCGGTGATGGAGGAGCTAGTTTCAAGGAGAAAGCTGGTCAGATGCATCGAGAACTTGGACACGGAAGAACTCGTTCTTCTCCTGCTGTTCCTGCACCGAAATGCAACCTTGCCAAGGTATGCCAGGTTCTTGATGGGGGTGGCAAACAAGGTGCTGGAGATGCGCGCGGATGATATCCGATCAGATGAGAACCTAAGGGGTTGTGTTAGAAATCTTAAGAGGATGGCTGCAGAGGAGATTCAGATACAGCACACATTGCAGGGGATCCAAGGGATGATTTCACCCATGCTTGCACTTGCCAGTAGATGAACAGGTGCTTTTCTTGTATCGGAATTCTTTTTTGGTCTGTT AGTTTACAGTGA GGCATGCCACA TACATG ATGATGTATG CTAGTTTACAAACTATT ATCGCCACTG AAATTTT GGCTGTC ATCCAATC GATATACTCTG                                                                                                                                                 ]
[+] EMBL OS1321775            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGTCAGATGCATCGAGAACTTGGACACGGAAGAACTCGTTCTTCTCCTGCTGTTCCTGCACCGAAATGCAACCTTGCCAAGGTATGCCAGGTTCTTGATGGGGGTGGCAAACAAGGTGCTGGAGATGCGCGCGGATGATATCCGATCAGATGAGAACCTAAGGGGTTGTGTTAGAAATCTTAAGAGGATGGCTGCAGAGGAGATTCAGATACAGCACACATTGCAGGGGATCCAAGGGATGATTTCACCCATGCTTGCACTTGCCAGTAGATGAACAGGTGCTTTTCTTGTATCGGAATTCTTTTTTGGTCTGTTAAGTTTACAGTGAGGGCATGCCACATTCCATGAATGNTGTATGNTTAGTTTACAAACTATTAATCGCCACTGAAAATTTTGGGCTGTCAATCCAATCGGNTATACTCTGT                                                                                                                                                ]


>consensus_7479#0 CAAAGTCCAAAACCCATAAACCCCCTCTCCCCCACTTCTCCCCCACAAACTAGGGTTTCA CTCGCCGCCGCCGCCCCCGCCGCCGCCATGGCCGCCGACACCTCCAAGCCCTTCTTCCCG GCGGCGCCGAACCCCGCCCTCCTCCCCTCCGGCCGCAAGCCCTCCCGCCTCTCCCCGGAG GCCTCCTACTGGCGCTCCTTCCGCGCCTCCGAGCTCACCCCCGCCAACGAGTTCAACGTC ACCCACCTCGCCTTCTCCCCCTCGTCGGCCCCCACCCTCGCCGCCTCGTTGTCCACCTCC GTGCTCCTCTTCTCCGGCGACCCGCTCTCCCCGCTCCCCCGCATCCCCGCCTCCCAGGAC GTCGCCTTCTCCCCGTCCTTCCGCTCCGACGGCTCCCTCCTCGCCGTCGGCGACAAGAAG GGCGTCGTCCGCGTCTTCCGCGCCGACAAGAAGCAGTCGTCGGGCGCGCTCCGCACGCTC ACGGCCCACACCGCCGAGACCCGCGTCGTCCGCTACCCCGTCGCCGGCGGCGACAAGGTC CACCTCTTCACCGCCGGCGACGACGCGCTCCTCGCCTACTGGGACGTGCCATCCGAGACG CCCGTGTTCGCCGCCCCCGCCGCCCACCGCGACTACATCCGCGCCGGCGCCGCGTCCCCC GCCGACCACAACATCTTCGCCACGGGCTCGTACGACCGCATCGTCAAATTGTGGGACGCC CGCATGGGGAAGACGTCGACGCTGTCCTTCTCCCATGGCGAATTGGTGGAGAGCGTGCTG TTCCTGCCGTCCGGCGGGCTGCTGGCGACAGCCGGCGGGAACGTCGTCAGGATTTGGGAT GTCATTGGTGGCGGGCGGCTTCTCCACTCGGTGGAGAGCCATGTCAAGACGGTGATGGCC CTCGCGCTCGCCAAGATGACCAACACCGGCGAGACGCGGCTGCTTAGCGCGGGGAGTGAT GGTTATGTCAAGAGCTTTGATTATGGCGAGCTTAAGCTCACGCACTCGATGCGATATCCT AAGGAATTGCTTTCCTTGGCGTGCTCGCCGTGTGGGACAGTGCTGGTTGCTGGATCTTCA AAGGGCACAATTTATATGGGTAGGAGGAAAAAGAAGTCGACAGGGGAGGACGAGGAAGAG GGTAAGGGTGTTGGTGGTGAGCTTGATTGGGCACCAACCAAGCCGGAGAAGCGGCGGTTG GCACCGTCCAACTATAGGTACTTCCTCCGTGGACAAAATGCGAAGGCTAAGGAAGGTGAC CTTGTGATTGAGAAGCCTAAGAAGGTGAAGGTTGCTGAACACGATAAGTTGCTGAGGAAG TTCAGGCACAAGGATGCTCTAGTTTCAGCGTTAGCTCGAAACAATCCAAGGAGCATAGTG GCGGTGATGGAGGAGCTAGTTTCAAGGAGAAAGCTGGTCAGATGCATCGAGAACTTGGAC ACGGAAGAACTCGTTCTTCTCCTGCTGTTCCTGCACCGAAATGCAACCTTGCCAAGGTAT GCCAGGTTCTTGATGGGGGTGGCAAACAAGGTGCTGGAGATGCGCGCGGATGATATCCGA TCAGATGAGAACCTAAGGGGTTGTGTTAGAAATCTTAAGAGGATGGCTGCAGAGGAGATT CAGATACAGCACACATTGCAGGGGATCCAAGGGATGATTTCACCCATGCTTGCACTTGCC AGTAGATGAACAGGTGCTTTTCTTGTATCGGAATTCTTTTTTGGTCTGTTAGTTTACAGT GAGGCATGCCACATACATGATGATGTATGCTAGTTTACAAACTATTATCGCCACTGAAAT TTTGGCTGTCATCCAATCGATATACTCTGTTGTGCCGCGAAAAGTTTTGATCAGTTCATT CCAGCTATGGTCATGTTTGCACTATGCAGTTTTGCCTTTTGGGTGTTGCTATGGATTGTT CATTGCGCTTGTTAACTATTTTTCAGCTTACTTCGCATGGTTCAGTTTTTGTTC



consensusID : consensus_7479#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1543
fasta sequence
                              [ACTCGCCGCCGCCGCCCCCGCCGCCGCCATGGCCGCCGACACCTCCAAGCCCTTCTTCCCGGCGGCGCCGAACCCCGCCCTCCTCCCCTCCGGCCGCAAGCCCTCCCGCCTCTCCCCGGAGGCCTCCTACTGGCGCTCCTTCCGCGCCTCCGAGCTCACCCCCGCCAACGAGTTCAACGTCACCCACCTCGCCTTCTCCCCCTCGTCGGCCCCCACCCTCGCCGCCTCGTTGTCCACCTCCGTGCTCCTCTTCTCCGGCGACGACGCGCTCCTCGCCTACTGGGACGTGCCATCCGAGACGCCCGTGTTCGCCGCCCCCGCCGCCCACCGCGACTACATCCGCGCCGGCGCCGCGTCCCCCGCCGACCACAACATCTTCGCCACGGGCTCGTACGACCGCATCGTCAAATTGTGGGACGCCCGCATGGGGAAGACGTCGACGCTGTCCTTCTCCCATGGCGAATTGGTGGAGAGCGTGCTGTTCCTGCCGTCCGGCGGGCTGCTGGCGACAGCCGGCGGGAACGTCGTCAGGATTTGGGATGTCATTGGTGGCGGGCGGCTTCTCCACTCGGTGGAGAGCCATGTCAAGACGGTGATGGCCCTCGCGCTCGCCAAGATGACCAACACCGGCGAGACGCGGCTGCTTAGCGCGGGGAGTGATGGTTATGTCAAGAGCTTTGATTATGGCGAGCTTAAGCTCACGCACTCGATGCGATATCCTAAGGAATTGCTTTCCTTGGCGTGCTCGCCGTGTGGGACAGTGCTGGTTGCTGGATCTTCAAAGGGCACAATTTATATGGGTAGGAGGAAAAAGAAGTCGACAGGGGAGGACGAGGAAGAGGGTAAGGGTGTTGGTGGTGAGCTTGATTGGGCACCAACCAAGCCGGAGAAGCGGCGGTTGGCACCGTCCAACTATAGGTACTTCCTCCGTGGACAAAATGCGAAGGCTAAGGAAGGTGACCTTGTGATTGAGAAGCCTAAGAAGGTGAAGGTTGCTGAACACGATAAGTTGCTGAGGGAGTTCAGGCACAAGGATGCTCTAGTTTCAGCGTTAGCTCGAAACAATCCAAGGAGCATAGTGGCGGTGATGGAGGAGCTAGTTTCAAGGAGAAAGCTGGTCAGATGCATCGAGAACTTGGACACGGAAGAACTCGTTCTTCTCCTGCTGTTCCTGCACCGAAATGCAACCTTGCCAAGGTATGCCAGGTTCTTGATGGGGGTGGCAAACAAGGTGCTGGAGATGCGCGCGGATGATATCCGATCAGATGAGAACCTAAGGGGTTGTGTTAGAAATCTTAAGAGGATGGCTGCAGAGGAGATTCAGATACAGCACACATTGCAGGGGATCCAAGGGATGATTTCACCCATGCTTGCACTTGCCAGTAGATGAGCAGGTGCTTTTCTTGTATCGGAATTCTTTTTTGGTCTGTTAGTTTACAGTGAGGCATGCCACATACATGATGATGTATGCTAGTTTACAAACTATTATCGCCACTGAAATTTTGGCTGTCATCCAATCGATATACTCTGTTGTGCCGCGAAA]

[+] EMBL AK111771             [ACTCGCCGCCGCCGCCCCCGCCGCCGCCATGGCCGCCGACACCTCCAAGCCCTTCTTCCCGGCGGCGCCGAACCCCGCCCTCCTCCCCTCCGGCCGCAAGCCCTCCCGCCTCTCCCCGGAGGCCTCCTACTGGCGCTCCTTCCGCGCCTCCGAGCTCACCCCCGCCAACGAGTTCAACGTCACCCACCTCGCCTTCTCCCCCTCGTCGGCCCCCACCCTCGCCGCCTCGTTGTCCACCTCCGTGCTCCTCTTCTCCGGCGACGACGCGCTCCTCGCCTACTGGGACGTGCCATCCGAGACGCCCGTGTTCGCCGCCCCCGCCGCCCACCGCGACTACATCCGCGCCGGCGCCGCGTCCCCCGCCGACCACAACATCTTCGCCACGGGCTCGTACGACCGCATCGTCAAATTGTGGGACGCCCGCATGGGGAAGACGTCGACGCTGTCCTTCTCCCATGGCGAATTGGTGGAGAGCGTGCTGTTCCTGCCGTCCGGCGGGCTGCTGGCGACAGCCGGCGGGAACGTCGTCAGGATTTGGGATGTCATTGGTGGCGGGCGGCTTCTCCACTCGGTGGAGAGCCATGTCAAGACGGTGATGGCCCTCGCGCTCGCCAAGATGACCAACACCGGCGAGACGCGGCTGCTTAGCGCGGGGAGTGATGGTTATGTCAAGAGCTTTGATTATGGCGAGCTTAAGCTCACGCACTCGATGCGATATCCTAAGGAATTGCTTTCCTTGGCGTGCTCGCCGTGTGGGACAGTGCTGGTTGCTGGATCTTCAAAGGGCACAATTTATATGGGTAGGAGGAAAAAGAAGTCGACAGGGGAGGACGAGGAAGAGGGTAAGGGTGTTGGTGGTGAGCTTGATTGGGCACCAACCAAGCCGGAGAAGCGGCGGTTGGCACCGTCCAACTATAGGTACTTCCTCCGTGGACAAAATGCGAAGGCTAAGGAAGGTGACCTTGTGATTGAGAAGCCTAAGAAGGTGAAGGTTGCTGAACACGATAAGTTGCTGAGGGAGTTCAGGCACAAGGATGCTCTAGTTTCAGCGTTAGCTCGAAACAATCCAAGGAGCATAGTGGCGGTGATGGAGGAGCTAGTTTCAAGGAGAAAGCTGGTCAGATGCATCGAGAACTTGGACACGGAAGAACTCGTTCTTCTCCTGCTGTTCCTGCACCGAAATGCAACCTTGCCAAGGTATGCCAGGTTCTTGATGGGGGTGGCAAACAAGGTGCTGGAGATGCGCGCGGATGATATCCGATCAGATGAGAACCTAAGGGGTTGTGTTAGAAATCTTAAGAGGATGGCTGCAGAGGAGATTCAGATACAGCACACATTGCAGGGGATCCAAGGGATGATTTCACCCATGCTTGCACTTGCCAGTAGATGAGCAGGTGCTTTTCTTGTATCGGAATTCTTTTTTGGTCTGTTAGTTTACAGTGAGGCATGCCACATACATGATGATGTATGCTAGTTTACAAACTATTATCGCCACTGAAATTTTGGCTGTCATCCAATCGATATACTCTGTTGTGCCGCGAAA]


>consensus_7479#1 ACTCGCCGCCGCCGCCCCCGCCGCCGCCATGGCCGCCGACACCTCCAAGCCCTTCTTCCC GGCGGCGCCGAACCCCGCCCTCCTCCCCTCCGGCCGCAAGCCCTCCCGCCTCTCCCCGGA GGCCTCCTACTGGCGCTCCTTCCGCGCCTCCGAGCTCACCCCCGCCAACGAGTTCAACGT CACCCACCTCGCCTTCTCCCCCTCGTCGGCCCCCACCCTCGCCGCCTCGTTGTCCACCTC CGTGCTCCTCTTCTCCGGCGACGACGCGCTCCTCGCCTACTGGGACGTGCCATCCGAGAC GCCCGTGTTCGCCGCCCCCGCCGCCCACCGCGACTACATCCGCGCCGGCGCCGCGTCCCC CGCCGACCACAACATCTTCGCCACGGGCTCGTACGACCGCATCGTCAAATTGTGGGACGC CCGCATGGGGAAGACGTCGACGCTGTCCTTCTCCCATGGCGAATTGGTGGAGAGCGTGCT GTTCCTGCCGTCCGGCGGGCTGCTGGCGACAGCCGGCGGGAACGTCGTCAGGATTTGGGA TGTCATTGGTGGCGGGCGGCTTCTCCACTCGGTGGAGAGCCATGTCAAGACGGTGATGGC CCTCGCGCTCGCCAAGATGACCAACACCGGCGAGACGCGGCTGCTTAGCGCGGGGAGTGA TGGTTATGTCAAGAGCTTTGATTATGGCGAGCTTAAGCTCACGCACTCGATGCGATATCC TAAGGAATTGCTTTCCTTGGCGTGCTCGCCGTGTGGGACAGTGCTGGTTGCTGGATCTTC AAAGGGCACAATTTATATGGGTAGGAGGAAAAAGAAGTCGACAGGGGAGGACGAGGAAGA GGGTAAGGGTGTTGGTGGTGAGCTTGATTGGGCACCAACCAAGCCGGAGAAGCGGCGGTT GGCACCGTCCAACTATAGGTACTTCCTCCGTGGACAAAATGCGAAGGCTAAGGAAGGTGA CCTTGTGATTGAGAAGCCTAAGAAGGTGAAGGTTGCTGAACACGATAAGTTGCTGAGGGA GTTCAGGCACAAGGATGCTCTAGTTTCAGCGTTAGCTCGAAACAATCCAAGGAGCATAGT GGCGGTGATGGAGGAGCTAGTTTCAAGGAGAAAGCTGGTCAGATGCATCGAGAACTTGGA CACGGAAGAACTCGTTCTTCTCCTGCTGTTCCTGCACCGAAATGCAACCTTGCCAAGGTA TGCCAGGTTCTTGATGGGGGTGGCAAACAAGGTGCTGGAGATGCGCGCGGATGATATCCG ATCAGATGAGAACCTAAGGGGTTGTGTTAGAAATCTTAAGAGGATGGCTGCAGAGGAGAT TCAGATACAGCACACATTGCAGGGGATCCAAGGGATGATTTCACCCATGCTTGCACTTGC CAGTAGATGAGCAGGTGCTTTTCTTGTATCGGAATTCTTTTTTGGTCTGTTAGTTTACAG TGAGGCATGCCACATACATGATGATGTATGCTAGTTTACAAACTATTATCGCCACTGAAA TTTTGGCTGTCATCCAATCGATATACTCTGTTGTGCCGCGAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7479#0      CAAAGTCCAAAACCCATAAACCCCCTCTCCCCCACTTCTCCCCCACAAACTAGGGTTTCA 60
consensus_7479#1      -----------------------------------------------------------A 1
                                                                                 *

consensus_7479#0      CTCGCCGCCGCCGCCCCCGCCGCCGCCATGGCCGCCGACACCTCCAAGCCCTTCTTCCCG 120
consensus_7479#1      CTCGCCGCCGCCGCCCCCGCCGCCGCCATGGCCGCCGACACCTCCAAGCCCTTCTTCCCG 61
                      ************************************************************

consensus_7479#0      GCGGCGCCGAACCCCGCCCTCCTCCCCTCCGGCCGCAAGCCCTCCCGCCTCTCCCCGGAG 180
consensus_7479#1      GCGGCGCCGAACCCCGCCCTCCTCCCCTCCGGCCGCAAGCCCTCCCGCCTCTCCCCGGAG 121
                      ************************************************************

consensus_7479#0      GCCTCCTACTGGCGCTCCTTCCGCGCCTCCGAGCTCACCCCCGCCAACGAGTTCAACGTC 240
consensus_7479#1      GCCTCCTACTGGCGCTCCTTCCGCGCCTCCGAGCTCACCCCCGCCAACGAGTTCAACGTC 181
                      ************************************************************

consensus_7479#0      ACCCACCTCGCCTTCTCCCCCTCGTCGGCCCCCACCCTCGCCGCCTCGTTGTCCACCTCC 300
consensus_7479#1      ACCCACCTCGCCTTCTCCCCCTCGTCGGCCCCCACCCTCGCCGCCTCGTTGTCCACCTCC 241
                      ************************************************************

consensus_7479#0      GTGCTCCTCTTCTCCGGCGACCCGCTCTCCCCGCTCCCCCGCATCCCCGCCTCCCAGGAC 360
consensus_7479#1      GTGCTCCTCTTCTCCGGCGAC--------------------------------------- 262
                      *********************                                       

consensus_7479#0      GTCGCCTTCTCCCCGTCCTTCCGCTCCGACGGCTCCCTCCTCGCCGTCGGCGACAAGAAG 420
consensus_7479#1      ------------------------------------------------------------
                                                                                  

consensus_7479#0      GGCGTCGTCCGCGTCTTCCGCGCCGACAAGAAGCAGTCGTCGGGCGCGCTCCGCACGCTC 480
consensus_7479#1      ------------------------------------------------------------
                                                                                  

consensus_7479#0      ACGGCCCACACCGCCGAGACCCGCGTCGTCCGCTACCCCGTCGCCGGCGGCGACAAGGTC 540
consensus_7479#1      ------------------------------------------------------------
                                                                                  

consensus_7479#0      CACCTCTTCACCGCCGGCGACGACGCGCTCCTCGCCTACTGGGACGTGCCATCCGAGACG 600
consensus_7479#1      ---------------------GACGCGCTCCTCGCCTACTGGGACGTGCCATCCGAGACG 301
                                           ***************************************

consensus_7479#0      CCCGTGTTCGCCGCCCCCGCCGCCCACCGCGACTACATCCGCGCCGGCGCCGCGTCCCCC 660
consensus_7479#1      CCCGTGTTCGCCGCCCCCGCCGCCCACCGCGACTACATCCGCGCCGGCGCCGCGTCCCCC 361
                      ************************************************************

consensus_7479#0      GCCGACCACAACATCTTCGCCACGGGCTCGTACGACCGCATCGTCAAATTGTGGGACGCC 720
consensus_7479#1      GCCGACCACAACATCTTCGCCACGGGCTCGTACGACCGCATCGTCAAATTGTGGGACGCC 421
                      ************************************************************

consensus_7479#0      CGCATGGGGAAGACGTCGACGCTGTCCTTCTCCCATGGCGAATTGGTGGAGAGCGTGCTG 780
consensus_7479#1      CGCATGGGGAAGACGTCGACGCTGTCCTTCTCCCATGGCGAATTGGTGGAGAGCGTGCTG 481
                      ************************************************************

consensus_7479#0      TTCCTGCCGTCCGGCGGGCTGCTGGCGACAGCCGGCGGGAACGTCGTCAGGATTTGGGAT 840
consensus_7479#1      TTCCTGCCGTCCGGCGGGCTGCTGGCGACAGCCGGCGGGAACGTCGTCAGGATTTGGGAT 541
                      ************************************************************

consensus_7479#0      GTCATTGGTGGCGGGCGGCTTCTCCACTCGGTGGAGAGCCATGTCAAGACGGTGATGGCC 900
consensus_7479#1      GTCATTGGTGGCGGGCGGCTTCTCCACTCGGTGGAGAGCCATGTCAAGACGGTGATGGCC 601
                      ************************************************************

consensus_7479#0      CTCGCGCTCGCCAAGATGACCAACACCGGCGAGACGCGGCTGCTTAGCGCGGGGAGTGAT 960
consensus_7479#1      CTCGCGCTCGCCAAGATGACCAACACCGGCGAGACGCGGCTGCTTAGCGCGGGGAGTGAT 661
                      ************************************************************

consensus_7479#0      GGTTATGTCAAGAGCTTTGATTATGGCGAGCTTAAGCTCACGCACTCGATGCGATATCCT 1020
consensus_7479#1      GGTTATGTCAAGAGCTTTGATTATGGCGAGCTTAAGCTCACGCACTCGATGCGATATCCT 721
                      ************************************************************

consensus_7479#0      AAGGAATTGCTTTCCTTGGCGTGCTCGCCGTGTGGGACAGTGCTGGTTGCTGGATCTTCA 1080
consensus_7479#1      AAGGAATTGCTTTCCTTGGCGTGCTCGCCGTGTGGGACAGTGCTGGTTGCTGGATCTTCA 781
                      ************************************************************

consensus_7479#0      AAGGGCACAATTTATATGGGTAGGAGGAAAAAGAAGTCGACAGGGGAGGACGAGGAAGAG 1140
consensus_7479#1      AAGGGCACAATTTATATGGGTAGGAGGAAAAAGAAGTCGACAGGGGAGGACGAGGAAGAG 841
                      ************************************************************

consensus_7479#0      GGTAAGGGTGTTGGTGGTGAGCTTGATTGGGCACCAACCAAGCCGGAGAAGCGGCGGTTG 1200
consensus_7479#1      GGTAAGGGTGTTGGTGGTGAGCTTGATTGGGCACCAACCAAGCCGGAGAAGCGGCGGTTG 901
                      ************************************************************

consensus_7479#0      GCACCGTCCAACTATAGGTACTTCCTCCGTGGACAAAATGCGAAGGCTAAGGAAGGTGAC 1260
consensus_7479#1      GCACCGTCCAACTATAGGTACTTCCTCCGTGGACAAAATGCGAAGGCTAAGGAAGGTGAC 961
                      ************************************************************

consensus_7479#0      CTTGTGATTGAGAAGCCTAAGAAGGTGAAGGTTGCTGAACACGATAAGTTGCTGAGGAAG 1320
consensus_7479#1      CTTGTGATTGAGAAGCCTAAGAAGGTGAAGGTTGCTGAACACGATAAGTTGCTGAGGGAG 1021
                      ********************************************************* **

consensus_7479#0      TTCAGGCACAAGGATGCTCTAGTTTCAGCGTTAGCTCGAAACAATCCAAGGAGCATAGTG 1380
consensus_7479#1      TTCAGGCACAAGGATGCTCTAGTTTCAGCGTTAGCTCGAAACAATCCAAGGAGCATAGTG 1081
                      ************************************************************

consensus_7479#0      GCGGTGATGGAGGAGCTAGTTTCAAGGAGAAAGCTGGTCAGATGCATCGAGAACTTGGAC 1440
consensus_7479#1      GCGGTGATGGAGGAGCTAGTTTCAAGGAGAAAGCTGGTCAGATGCATCGAGAACTTGGAC 1141
                      ************************************************************

consensus_7479#0      ACGGAAGAACTCGTTCTTCTCCTGCTGTTCCTGCACCGAAATGCAACCTTGCCAAGGTAT 1500
consensus_7479#1      ACGGAAGAACTCGTTCTTCTCCTGCTGTTCCTGCACCGAAATGCAACCTTGCCAAGGTAT 1201
                      ************************************************************

consensus_7479#0      GCCAGGTTCTTGATGGGGGTGGCAAACAAGGTGCTGGAGATGCGCGCGGATGATATCCGA 1560
consensus_7479#1      GCCAGGTTCTTGATGGGGGTGGCAAACAAGGTGCTGGAGATGCGCGCGGATGATATCCGA 1261
                      ************************************************************

consensus_7479#0      TCAGATGAGAACCTAAGGGGTTGTGTTAGAAATCTTAAGAGGATGGCTGCAGAGGAGATT 1620
consensus_7479#1      TCAGATGAGAACCTAAGGGGTTGTGTTAGAAATCTTAAGAGGATGGCTGCAGAGGAGATT 1321
                      ************************************************************

consensus_7479#0      CAGATACAGCACACATTGCAGGGGATCCAAGGGATGATTTCACCCATGCTTGCACTTGCC 1680
consensus_7479#1      CAGATACAGCACACATTGCAGGGGATCCAAGGGATGATTTCACCCATGCTTGCACTTGCC 1381
                      ************************************************************

consensus_7479#0      AGTAGATGAACAGGTGCTTTTCTTGTATCGGAATTCTTTTTTGGTCTGTTAGTTTACAGT 1740
consensus_7479#1      AGTAGATGAGCAGGTGCTTTTCTTGTATCGGAATTCTTTTTTGGTCTGTTAGTTTACAGT 1441
                      ********* **************************************************

consensus_7479#0      GAGGCATGCCACATACATGATGATGTATGCTAGTTTACAAACTATTATCGCCACTGAAAT 1800
consensus_7479#1      GAGGCATGCCACATACATGATGATGTATGCTAGTTTACAAACTATTATCGCCACTGAAAT 1501
                      ************************************************************

consensus_7479#0      TTTGGCTGTCATCCAATCGATATACTCTGTTGTGCCGCGAAAAGTTTTGATCAGTTCATT 1860
consensus_7479#1      TTTGGCTGTCATCCAATCGATATACTCTGTTGTGCCGCGAAA------------------ 1543
                      ******************************************                  

consensus_7479#0      CCAGCTATGGTCATGTTTGCACTATGCAGTTTTGCCTTTTGGGTGTTGCTATGGATTGTT 1920
consensus_7479#1      ------------------------------------------------------------
                                                                                  

consensus_7479#0      CATTGCGCTTGTTAACTATTTTTCAGCTTACTTCGCATGGTTCAGTTTTTGTTC 1974
consensus_7479#1      ------------------------------------------------------
                                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)