Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 749 cluster # 749       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_749#0 length = 693 sequences # 2  

consensusID : consensus_749#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 693
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTGGAGAGAAATTGTCATCATCATCAGGGGCAAGTTGTCCTTTAGGATTCAGATAAGGAGGAAGAATTCAGAGTCACAGGTTCAACAAAGGCTGCACTGCGTTCTCTCGATTTACTAGGAAAAAAATTCTTTTGACCAAAGAATGGACACTTCTGCTATATCATAGTGTAAAAAAAAACTGTGAGAGAGAGAGAGTGAATCGTATATCTTC-TTTTTTTTCATATATTTTTGGGAATGAGTAAATGCCTCAAAGTGAGAAATTCTATCTTCTGGTGGGGAGTTTCAAGTATCATGTCAATATAAATAAAAGATAGAGTAGGCATCCTGCCACAAGAAGCATGTACTTTGGGCTTTCCAACGGTGAACCACCAATGAGGTACCTATTCCTTTTGTTCCATTCATAATCCCAGGGCACACTGTTGCACCTGACTGTCCAATAAGACCAGCCAAAGGAGGCTTCCCCGTAGACCTCTAATTGGGCTTTTCCAAACAACTGGTATTCGGTTTGTGAAGCGTCTGTCACATTCCATTCATTTACCCATTCTCCAATAAAAACAAGAGGTCCATTCGCTTTATCCAAGGCCTGCACTTGAGGCATTCTGTTATTGGATATGAACTGGATGTTCTCTGTTGCATTAAGGTTCTCAAAAAACGGATCANACAGATTGTAGTAATG]

[+] EMBL CA759317             [TTTTTTTTTTTTTTTTTTTGGAGAGAAATTGTCATCATCATCAGGGGCAAGTTGTCCTTTAGGATTCAGATAAGGAGGAAGAATTCAGAGTCACAGGTTCAACAAAGGCTGCACTGCGTTCTCTCGATTTACTAGGAAAAAAATTCTTTTGACCAAAGAATGGACACTTCTGCTATATCATAGTGTAAAAAAAAACTGTGAGAGAGAGAGAGTGAATCGTATATCTTC TTTTTTTTCATATATTTTTGGGAATGAGTAAATGCCTCAAAGTGAGAAATTCTATCTTCTGGTGGGGAGTTTCAAGTATCATGTCAATATAAATAAAAGATAGAGTAGGCATCCTGCCACAAGAAGCATGTACTTTGGGCTTTCCAACGGTGAACCACCAATGAGGTACCTATTCCTTTTGTTCCATTCATAATCCCAGGGCACACTGTTGCACCTGACTGTCCAATAAGACCAGCCAAAGGAGGCTTCCCCGTAGACCTCTAATTGGGCTTTTCCAAACAACTGGTATTCGGTTTGTGAAGCGTCTGTCACATTCCATTCATTTACCCATTCTCCAATAAAAACAAGAGGTCCATTCGCTTTATCCAAGGCCTGCACTTGAGGCATTCTGTTATTGGATATGAACTGGATGTTCTCTGTTGCATTAAGGTTCTCAAAAAACGGATCANACAGATTGTAGTAATG]
[-] EMBL BM420688             [                                                                                                                                                                                                                 tttTGAATCGTATATCTTCTTTTTTTTTCATATA TTTTGTGAATGAGTAAATG CTCAAAGTGAGAAATTCTATCTTC GGTGGTGAG TTCAAGTATCATGTCAATATAAATAAAAGATAGAGTAGGCATCCTGCCACAAGAAGCATGTAC TTGGGCTTTCCAACGGTGAACCACCAATGAGGTACCTATTCC TTTGTTCCATTCATAATCCCAGTGCACACTGTTGCACCTGACTGTCCAATAAGACCAGCCAAAGGAGGCTTCCCCGTAGACCTCTAA TGGGCTTTTCCAAACAACTGGTATTCGG TTGTGAAGCGTCTGTCACATTCCATTC                                                                                                                                                ]


>consensus_749#0 TTTTTTTTTTTTTTTTTTTGGAGAGAAATTGTCATCATCATCAGGGGCAAGTTGTCCTTT AGGATTCAGATAAGGAGGAAGAATTCAGAGTCACAGGTTCAACAAAGGCTGCACTGCGTT CTCTCGATTTACTAGGAAAAAAATTCTTTTGACCAAAGAATGGACACTTCTGCTATATCA TAGTGTAAAAAAAAACTGTGAGAGAGAGAGAGTGAATCGTATATCTTCTTTTTTTTCATA TATTTTTGGGAATGAGTAAATGCCTCAAAGTGAGAAATTCTATCTTCTGGTGGGGAGTTT CAAGTATCATGTCAATATAAATAAAAGATAGAGTAGGCATCCTGCCACAAGAAGCATGTA CTTTGGGCTTTCCAACGGTGAACCACCAATGAGGTACCTATTCCTTTTGTTCCATTCATA ATCCCAGGGCACACTGTTGCACCTGACTGTCCAATAAGACCAGCCAAAGGAGGCTTCCCC GTAGACCTCTAATTGGGCTTTTCCAAACAACTGGTATTCGGTTTGTGAAGCGTCTGTCAC ATTCCATTCATTTACCCATTCTCCAATAAAAACAAGAGGTCCATTCGCTTTATCCAAGGC CTGCACTTGAGGCATTCTGTTATTGGATATGAACTGGATGTTCTCTGTTGCATTAAGGTT CTCAAAAAACGGATCANACAGATTGTAGTAATG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)