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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7490 cluster # 7490       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7490#0 length = 800 sequences # 4  

consensusID : consensus_7490#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 800
fasta sequence
                              [TTTTTTTTTTTTTTGCGGTGGGAATATTATGATGAATTCATTACTGCAGTAAATCACCATGTTGATGTGATCATCAAGAAGCCTCCAGAAATAGGTTGAGTACTTCAGTTAGTACTACTTACCACACGACCCAGAGCTAGCTAGATCAGTGAGACAGTGACTAAACTGGGGCCATGAAATGACAAAAATGTGAGATTAGGTTTCCATCTTCAAAAATGTACTTATGTACAACAAGAACTCATCATTCCTATAACATATTCTACACATATGACGATAGGCCGAAACTATTTCTGGACTTACACAATATAAGTCTTCTTGAGTCCTTTCCTGCCACGCCGCCTCTTCAGATTGGATGCATCAGTCATGCGATTCATAGCGTTGAGAATTTCCTCATCCTCGTTGTTCCACAGTATTCTCGATTTATCAGGGTTTTCTAACAGCTGCTTGGCCACGAGAAAACCGGCAATGGTCCATGTCTGAAAAAGCCGAGACTGCTTCCCGATGAATCGTGCACGTTTGGTATCGTAGTATTCAGGCCATTTATCATTGGCAATACGTCGCTCAGCAACCTCCACAGCTTTTGCTGCAATCTCTGACCGGTCCACCTTGATACATGCTACTGTGAGCTGCCACAATAGGGGTTGCCAGGAACCTCCATTATGGTAAGACCAAGCCGTATTTTTAGGGTCGGTCCCTGTATGGAATTT-CACTCCCCCTCCTCAAGAGCAGGATAGCATATCTTCATTGGCATATCCGCCACTAAATCAGACCATTTGGCTTCAACCAGATCCAAAATAGCA]

[+] EMBL CA759634             [TTTTTTTTTTTTTTGCGGTGGGAATATTATGATGAATTCATTACTGCAGTAAATCACCATGTTGATGTGATCATCAAGAAGCCTCCAGAAATAGGTTGAGTACTTCAGTTAGTACTACTTACCACACGACCCAGAGCTAGCTAGATCAGTGAGACAGTGACTAAACTGGGGCCATGAAATGACAAAAATGTGAGATTAGGTTTCCATCTTCAAAAATGTACTTATGTACAACAAGAACTCATCATTCCTATAACATATTCTACACATATGACGATAGGCCGAAACTATTTCTGGACTTACACAATATAAGTCTTCTTGAGTCCTTTCCTGCCACGCCGCCTCTTCAGATTGGATGCATCAGTCATGCGATTCATAGCGTTGAGAATTTCCTCATCCCCGTTGTTCCACAGTATTCTCGATTTATCAGGGTTTTCTAACAGCTGCTTGGCCACGAGAAAACCGGCAATGGTCCATGTCTGAAAAAGCCGAGACTGCTTCCCGATGAATCGTGCACGTTTGGTATCGTAGTATTCAGGCCATTTATCATTGGGCATACGTCGCTCAGCAACCTCCACAGCCTTTGCTGCAATCTCTGACCGGTCCACCTTGATACATGCTACTGTGAGCTGCCACAATAGGGGTTGCCAGGAACCTCCATTATGGTAAGACCACGCCGGATTTTTAGGGTCGGTCCCTGTATGGAATTT CACTCCCCC                                                                                    ]
[-] EMBL BI806441             [                                                                                                                                                        tttttTGACTAAAC GGGGCCATGAAATGACAAAAATGTGAGATTAGGTTTCCATCTTCAAAAATGTACTTATGTACAACAAGAACTCATCATTCCTATAACATATTCTACACATATGACGATAGGCCGAAACTATTTCTGGACTTACACAATATAAGTCTTCTTGAGTCCTTTCCTGCCACGCCGCCTCTTCAGA TGGATGCATCAGTCATGCGATTCATAGCGTTGAGAATTTCCTCATCCTCG TGTTCCACAGTATTCTCGATTTATCAGGGTTTTCTAACAGCTGCTTGGCCACGAGAAAACCGGCAATGGTCCATGTCTGAAAAAGCCGAGACTG TTCCCGATGAATCGTGCACG TTGGTATCGTAGTATTCAGGCCATTTATCATTGGCAATACGTCGCTCAGCAACCTCCACAGCTTTTG TGCAATCTCTGACCGGTCCACCTTGATACATGCTACTGTGAGCTG CACAATA GTGTTGGCAGGAAACTCCATTATGGTAAGAACAAGCCGTATTT                                                                                                                        ]
[-] EMBL CA759635             [                                                                                                                                                                            tttttttTGACAAAAATGTGAGATTAGGTTTCCATCTTCAAAAATGTACTTATGTACAACAAGAACTCATCATTCCTATAACATATTCTACACATATGACGATAGGCCGAAACTATTTCTGGACTTACACAATATAAGTCTTCTTGAGTCCTTTCCTGCCACGCCGCCTCTTCAGATTGGATGCATCAGTCATGCGATTCATAGCGTTGAGAATTTCCTCATCCTCGTTGTTCCACAGTATTCTCGATTTATCAGGGTTTTCTAACAGCTGCTTGGCCACGAGAAAACCGGCAATGGTCCATGTCTGAAAAAGCCGAGACTGCTTCCCGATGAATCGTGCACGTTTGGTATCGTAGTATTCAGGCCATTTATCATTGGCAATACGTCGCTCAGCAACCTCCACAGCTTTTGCTGCAATCTCTGACCGGTCCACCTTGATACATGCTACTGTGAGCTGCCACAATAGTGTTGGCCAGGAACCTCCATTATGGTAAGACCAAGCCGTATTTTTAGGGTCGCTCCCTGTAATGAATTTCCACTCCTGATCCTCAAGAGCAGGATAGCATATCTTCATTGGCATATCCGCCACTAAATCAGACCATTTGGCTTCAACCAGATCCAAAATAGCA]
[+] EMBL AU165076             [                                                                                                                                                                              tttttTGACAAAAATGTGAGATTAGGTTTCCATCTTCAAAAATGTACTTATGTACAACAAGAACTCATCATTCCTATAACATATTCTACACATATGACGATAGGCCGAAACTATTTCTGGACTTACACAATATAAGTCTTCTTGAGTCCTTTCCTGCCACGCCGCCTCTTCAGATTGGATGCATCAGTCATGCGATTCATAGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_7490#0 TTTTTTTTTTTTTTGCGGTGGGAATATTATGATGAATTCATTACTGCAGTAAATCACCAT GTTGATGTGATCATCAAGAAGCCTCCAGAAATAGGTTGAGTACTTCAGTTAGTACTACTT ACCACACGACCCAGAGCTAGCTAGATCAGTGAGACAGTGACTAAACTGGGGCCATGAAAT GACAAAAATGTGAGATTAGGTTTCCATCTTCAAAAATGTACTTATGTACAACAAGAACTC ATCATTCCTATAACATATTCTACACATATGACGATAGGCCGAAACTATTTCTGGACTTAC ACAATATAAGTCTTCTTGAGTCCTTTCCTGCCACGCCGCCTCTTCAGATTGGATGCATCA GTCATGCGATTCATAGCGTTGAGAATTTCCTCATCCTCGTTGTTCCACAGTATTCTCGAT TTATCAGGGTTTTCTAACAGCTGCTTGGCCACGAGAAAACCGGCAATGGTCCATGTCTGA AAAAGCCGAGACTGCTTCCCGATGAATCGTGCACGTTTGGTATCGTAGTATTCAGGCCAT TTATCATTGGCAATACGTCGCTCAGCAACCTCCACAGCTTTTGCTGCAATCTCTGACCGG TCCACCTTGATACATGCTACTGTGAGCTGCCACAATAGGGGTTGCCAGGAACCTCCATTA TGGTAAGACCAAGCCGTATTTTTAGGGTCGGTCCCTGTATGGAATTTCACTCCCCCTCCT CAAGAGCAGGATAGCATATCTTCATTGGCATATCCGCCACTAAATCAGACCATTTGGCTT CAACCAGATCCAAAATAGCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)