These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7497#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1980 fasta sequence [TTCTCCTCCTCTCTCTCTCTCCGACACGCCCCTTTAACTCGCTCCCGATTCCAAAAAATTCCGCCATAGATTAAAGCGAGAAACCCCAAGCAACCACCACCACCACGACCCGGAGTCCTCCCGGATCGATCAGTCCAACCCTGCGAATCAAATCCCAAGCCTTCTCGACGCTGGCCTCGATCGATTGGGAGGCCGCGTCTGCGTCCCCTTCTCTTTCCGGAGGAAGCTGGTGGCTTGCTGTGCGGCGGTGGCATCGTCGGTTGGAGGCGCGGGGGAGCACTCGTCGCGTCCCGGGGGAGATCGAATCTAGCGGCGGACGGGCAATGCGGTTGGTTTCCGGGGTGATTTGAGGCGGGAGGCTGGGATCTGGGTCTGGAAGGGAGGTGGGGAGCTCTGTCGGTGGGGTGGGGGGTGGGGGGAGTTGGTGGCGAGTCGACCGCGTGCTCGGGTTTGTGAGTGAGTATGGAGCGCGTAATT-GGGGCAAGTTTAAGCTCGNGAAGAAG-TCGTGAGTGGATCCTTCGGGGAGCTCTATCTCGCCGTGAACATACAGAATAGCGAAGAGGTGGCCGTCAAACTGGAGTCTGTGAAATCAAGGCATCCTCAGCTACACTATGAATCAAAACTATATATGCTTTTGCAAGGAGGAACTGGGATTCCACATCTTAAGTGGTTTGGGGTTGAGGGGGAGTACAATGTAATGGTGATCGATCTTCTTGGCCCAAGTCTTGAGGACCTATTTAACTACTGCAACAGAAAGCTCTCTCTTAAATCAGTGCTTATGCTTGCTGATCAGATGATTGCTAGAGTAGAGTACATGCACACGAGAGGATTCCTTCATCGTGATATTAAGCCAGACAATTTCCTTATGGGTTTGGGTCGTAAAGCAAATCAGGTTTATGTCATCGATTATGGGCTTGCGAAAAAGTACCGAGATCTCCAAACACATAAGCACATACCTTATAGGGAAAACAAAAATCTAACTGGAACTGCACGATATGCTAGTGTTAATACACATCTTGGAGTTGAACAAAGCAGGAGAGATGATTTGGAATCTCTCGGTTATGTACTGATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAAGGTCTGAAAGCTGGTACAAAGAAGCAAAAGTATGATAGAATCAGTGAAAAGAAGATGCTGACCCCAGTTGAGGTCCTCTGTAAATCTTATCCATCAGAATTTGTTTCATACTTCCATTATTGCCGATCACTACGGTTTGAAGATAAGCCAGACTATTCCTATTTGAAGAAGCTCTTCCGAGACTTATTTATCCGTGAAGGGTACCAACTTGATTATGTATTTGACTGGACCATGTTGAAGTATCCTCAAATTAGAGATAACAAACTACGACCTAGTGGGAAGACAAGTGGGTTGGTGGGTCGTTCTGCAGAACGGACTGAAAGAACTACAGGTGAAGCTCTTGCTAGAAGAACTGGCTCTGGTTCTGGCCGAAATGGAGAACCCACTAAGCACAGAACTCTACTGGACTCACTGATGTCATCTAAGGCTACCGCTGATACAGATAAAACAAGGCCGACATCACTGTCGCGGAACGGGAGCACGTCAAGACGGGCTGTTGTTTCGTCGAGCAAACCGAATTGTGGAGATCCCAGTGACACCAATCGCACAAGCCGCCTATTCTCAAGTAGCAGCAGCCGGCCATCCGCTGCCCAAAGGGCGCTTCAGTCGGCCGGAGCTGAGCTGAGGTCCTCGTCGTTGTCCAAGACGCGTAAGAGCTCACGTGATGATCCCACCATACGGAGCTTCGAGATGCTCTCACTCAGCGCTGACAGGAGGAAATAAGGAACGGATGTATTGATGTTACTGGCAAGAGACTATTATTTGGGGTGCAGTGTTA-TGAGCTGCCGCTCCACTATTGGTACGTTGAAATGCAATCATAATGAACAGATGTGTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN] [+] EMBL C91756 [TTCTCCTCCTCTCTCTCTCTCCGACACGCCCCTTTAACTCGCTCCCGATTCCAAAAAATTCCGCCATAGATTAAAGCGAGAAACCCCAAGCAACCACCACCACCACGACCCGGAGTCCTCCCGGATCGATCAGTCCAACCCTGCGAATCAAATCCCAAGCCTTCTCGACGCTGGCCTCGATCGATTGGGAGNCCGCGTCTGCGTCCCCTTCTCTTTCCGGAGGAAGCTGGTGGCTTGCTGTGCGGCGGTGGCATCGTCGGTTGGAGGCGCGGGGGAGCACTCGTCGCGTCCCGGGGGAGATCGAATCTAGCGGCGGACGGGCAATGCGGTTGGTTTCCGGGGTGANTTNAGGCGGGAGGCTNGGATCTTGGTCTTGAAGGGAGGTNGGGAGCTCT ] [+] EMBL C28415 [ ACCCCAAGCAACCACCACCACCACGACCCGGAGTCCTCCCGGATCGATCAGTCCAACCCTGCGAATCAAATCCCAAGCCTTCTCGACGCTGGCCTCGATCGATTGGGAGGCCGCGTCTGCGTCCCCTTCTCTTTCCGGA GAAGCTGGTGGCTTGCTGTGCGGCGGTGGCATCGTCGGTTGGAGGCGCGTGGGAGCACTCGTCGCGTCCCGGGGGAGATCGAATCTAGCGGCGGACGNGCAATGCGGTTGGTTTCCGGGGTGATTTGAGGCGNGAGGCTGGGATCTGGGTCTGGAAGGGAGGTGGGGAGCTCTGTCGGTGGGGTGGGGGGTGGGGGGAGTTGGTGGCGAGTCGACCGCGTGCTCGGGTTTGTGAGTGAGTATGGAGCGCGTAATT GGGGCAAGTTTAAGCTCGNGAAGAAG TCGTGAGTGGATCCTTCGGG ] [+] EMBL AK111987 [ CCAAGCCTTCTCGACGCTGGCCTCGATCGATTGGGAGGCCGCGTCTGCGTCCCCTTCTCTTTCCGGAGGAAGCTGGTGGCTTGCTGTGCGGCGGTGGCATCGTCGGTTGGAGGCGCGGGGGAGCACTCGTCGCGTCCCGGGGGAGATCGAATCTAGCGGCGGACGGGCAATGCGGTTGGTTTCCGGGGTGATTTGAGGCGGGAGGCTGGGATCTGGGTCTGGAAGGGAGGTGGGGAGCTCTGTCGGTGGGGTGGGGGGTGGGGGGAGTTGGTGGCGAGTCGACCGCGTGCTCGGGTTTGTGAGTGAGTATGGAGCGCGTTATTGGGGGCAAGTTTAAGCTCGGGAAGAAGATCGGGAGTGGATCCTTCGGGGAGCTCTATCTCGCCGTGAACATACAGAATAGCGAAGAGGTGGCCGTCAAACTGGAGTCTGTGAAATCAAGGCATCCTCAGCTACACTATGAATCAAAACTATATATGCTTTTGCAAGGAGGAACTGGGATTCCACATCTTAAGTGGTTTGGGGTTGAGGGGGAGTACAATGTAATGGTGATCGATCTTCTTGGCCCAAGTCTTGAGGACCTATTTAACTACTGCAACAGAAAGCTCTCTCTTAAATCAGTGCTTATGCTTGCTGATCAGATGATTGCTAGAGTAGAGTACATGCACACGAGAGGATTCCTTCATCGTGATATTAAGCCAGACAATTTCCTTATGGGTTTGGGTCGTAAAGCAAATCAGGTTTATGTCATCGATTATGGGCTTGCGAAAAAGTACCGAGATCTCCAAACACATAAGCACATACCTTATAGGGAAAACAAAAATCTAACTGGAACTGCACGATATGCTAGTGTTAATACACATCTTGGAGTTGAACAAAGCAGGAGAGATGATTTGGAATCTCTCGGTTATGTACTGATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAAGGTCTGAAAGCTGGTACAAAGAAGCAAAAGTATGATAGAATCAGTGAAAAGAAGATGCTGACCCCAGTTGAGGTCCTCTGTAAATCTTATCCATCAGAATTTGTTTCATACTTCCATTATTGCCGATCACTACGGTTTGAAGATAAGCCAGACTATTCCTATTTGAAGAAGCTCTTCCGAGACTTATTTATCCGTGAAGGGTACCAACTTGATTATGTATTTGACTGGACCATGTTGAAGTATCCTCAAATTAGAGATAACAAACTACGACCTAGTGGGAAGACAAGTGGGTTGGTGGGTCGTTCTGCAGAACGGACTGAAAGAACTACAGGTGAAGCTCTTGCTAGAAGAACTGGCTCTGGTTCTGGCCGAAATGGAGAACCCACTAAGCACAGAACTCTACTGGACTCACTGATGTCATCTAAGGCTACCGCTGATACAGATAAAACAAGGCCGACATCACTGTCGCGGAACGGGAGCACGTCAAGACGGGCTGTTGTTTCGTCGAGCAAACCGAATTGTGGAGATCCCAGTGACACCAATCGCACAAGCCGCCTATTCTCAAGTAGCAGCAGCCGGCCATCCGCTGCCCAAAGGGCGCTTCAGTCGGCCGGAGCTGAGCTGAGGTCCTCGTCGTTGTCCAAGACGCGTAAGAGCTCACGTGATGATCCCACCATACGGAGCTTCGAGATGCTCTCACTCAGCGCTGACAGGAGGAAATAAGGAACGGATGTATTGATGTTACTGGCAAGAGACTATTATTTGGGGTGCAGTGTTA TGAGCTGCCGCTCCACTATTGGTACGTTGAAATGCAATCATAATGAAC ] [+] EMBL AU094761 [ TCCCAGTGACNCCAATCGCACAAGCCNCCTATTCTCAAGTNGCAGCAGCCNGCCATCCGCTNCCCAAAGGGCGCTTCAGTCNNCCGGAGCTGAGCTGAGGTCCTCGTCGTTGTCCAAGACGCGTAAGNGCTCACGTGATGATCCCNCCATACGGAGCTTCGAGATGCTCTCACTCAGCGCTNACAGGNGGAAATAAGGNACGGATGTATTGATGTTACTGGCAAGAGACTNTTNTTTGGGGTGCAGTGTTAGTGAG TGCCGCTCCACTATTGGTACGTTGAAATGCAATCATAATGAACAGATGTGTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||