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Oryza sativa
cluster # 7499 cluster # 7499       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7499#0 length = 1759 sequences # 4  

consensusID : consensus_7499#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1759
fasta sequence
                              [GTACGCGCCCCCTGGTGGCCGGCGCGTTGGGAGCTCTGAGCGGAGGCGGGCGGCTGCGCGGCCATGGAGGGACGCGAGCGCCGCCGCAGCATGTCGTCCTCGTCGTCCGGGAGGCGCACGCCGGAGCTGGAGAGGGAGCGATGGGCGCCGTGGAGCCCCGCCCCCACGTGGTCGCGGCCGCTCTCCGTCGGGGGCGGCGGCAGTAGGGCGGCGTCGCTCAAGTCGCTCTTCAGGACGATCGGGTTGTGGTTCAGCTCGCTCTCCACCTCCTCCTCCTCCTCGTCGTCGGCGGCGGCCACCTCCGCCTCCGGCAGCAACGCTAAGAGGAGGAGCAGAAGAGAGCCCAATGACTTGATCAAGAAGCCGCCATTGCCGGGGCCTGGCAGTGATCAGGGGAAGGCGTCGATGCGCGGGCTGTACAACAGCAGCAGGGGAAGAGGCATCGCGACGCAGTTCCAGAGCTCGGTGTTCTCCATGGAGGAGATCCTGCGCGCCACCAACAACTTCTCGCCGGCGCTCAAGGTCGGCCAGGGCGGCTTCGGCGCCGTCTACAGGGGCGTCCTCCCCGACGGCACGCTCGTCGCCGTCAAGCGCGCCAAGCTCCGGGACCAGAACCCGCACGTGGACGTGGAGTTCCGGAGCGAGGTGAAGGCCATGGCGCGCATCGAGCACCAGAGCCTCGTCCGCTTCTACGGCTACCTCGAGTGCGGCCAGGAGAGGGTCATCGTCGTCGAGTTCGTCCCCAACGGCACGCTCCGCGAGCACCTCGACAGGTGCAAC-GGGAGGTTCTTGGACATGGGCGCGCGGCTGGAGATCGCCATCGACGTCGCGCACGCGGTGACGTACCTGCACATGTACGCCGATCACCCCATCATCCACCGCGACATCAAGTCGTCGAACGTGCTGCTCACCCCGTCGCTGCGCGCCAAGGTGGGCGACTTCGGGTTCGCGCGGCTGGGCGTCGGCGAGGCCGGCGCCGCCGACGGCGTGACGCACGTGACGACGCAGGTGAAGGGCACGGCGGGGTACCTCGACCCGGAGTACCTCAAGACGTGCCAGCTCACCGACCGGAGCGACGTCTACTCCTTCGGCGTGCTGCTGCTGGAGATCGCCTCCGGGCGGCGACCCATCGAGGCGAGGCGGGAGATGCGGGAGCGGCTGACGGCGCGGTGGGCGATGCGCAAGCTCGCCGAGGGCGCGGCGGCGGACGTGCTGGACCCGCACCTGCCGCGGACGCCGGCGACGGCGCGCGCCGCGGAGATGGTGATGGAGCTGGCGTTCCGGTGCCTCGCCCCCGTGAGGCAGGAGAGGCCGAGCATGGGCGAGTGCTGCAGGGCGCTGTGGGCGGTCAGGAAGACGTACAGGGACATGGTGGTGGCCGCCGCCGGCGACGAGACGCCGCTCTCGTCCATCTCCGACCGGGCCAGCTCGTCGTCCGCCGGCACCGGCGGCGACCGGAGCGGCGAGCTCTGGAGGAATTAATCAACGTTTTGCTGTAAATATGCAAAAGCGAAAGTATTCGTTAAAATTCTGCTCATGTGTTGATGTTGTTTGTGAATTGTGATCGAGCTAATCGCTGACACGATACGGTTGGAATGTGATTTTGCCTTCGTTACTTGTCCATCTGGTTTTGTTCATCACGTTCTGGATTTACTATTAGATTAAAAAATTTTGGGGGCCATTTGTTATTACCGATGTTTTGTTTTGAACCACCTTTTAACCAATGTTTTCACTTTTAATCGGGTAAAAAAAAAAAAGA]

[+] EMBL AK112048             [GTACGCGCCCCCTGGTGGCCGGCGCGTTGGGAGCTCTGAGCGGAGGCGGGCGGCTGCGCGGCTATGGAGGGACGCGAGCGCCGCCGCAGCATGTCGTCCTCGTCGTCCGGGAGGCGCACGCCGGAGCTGGAGAGGGAGCGATGGGCGCCGTGGAGCCCCGCCCCCACGTGGTCGCGGCCGCTCTCCGTCGGGGGCGGCGGCAGTAGGGCGGCGTCGCTCAAGTCGCTCTTCAGGACGATCGGGTTGTGGTTCAGCTCGCTCTCCACCTCCTCCTCCTCCTCGTCGTCGGCGGCGGCCACCTCCGCCTCCGGCAGCAACGCTAAGAGGAGGAGCAGAAGAGAGCCCAATGACTTGATCAAGAAGCCGCCATTGCCGGGGCCTGGCAGTGATCAGGGGAAGGCGTCGATGCGCGGGCTGTACAACAGCGGCAGGGGAAGAGGCATCGCGACGCAGTTCCAGAGCTCGGTGTTCTCCATGGAGGAGATCCTGCGCGCCACCAACAACTTCTCGCCGGCGCTCAAGGTCGGCCAGGGCGGCTTCGGCGCCGTCTACAGGGGCGTCCTCCCCGACGGCACGCTCGTCGCCGTCAAGCGCGCCAAGCTCCGGGACCAGAACCCGCACGTGGACGTGGAGTTCCGGAGCGAGGTGAAGGCCATGGCGCGCATCGAGCACCAGAGCCTCGTCCGCTTCTACGGCTACCTCGAGTGCGGCCAGGAGAGGGTCATCGTCGTCGAGTTCGTCCCCAACGGCACGCTCCGCGAGCACCTCGACAGGTGCAAC GGGAGGTTCTTGGACATGGGCGCGCGGCTGGAGATCGCCATCGACGTCGCGCACGCGGTGACGTACCTGCACATGTACGCCGATCACCCCATCATCCACCGCGACATCAAGTCGTCGAACGTGCTGCTCACCCCGTCGCTGCGCGCCAAGGTGGGCGACTTCGGGTTCGCGCGGCTGGGCGTCGGCGAGGCCGGCGCCGCCGACGGCGTGACGCACGTGACGACGCAGGTGAAGGGCACGGCGGGGTACCTCGACCCGGAGTACCTCAAGACGTGCCAGCTCACCGACCGGAGCGACGTCTACTCCTTCGGCGTGCTGCTGCTGGAGATCGCCTCCGGGCGGCGACCCATCGAGGCGAGGCGGGAGATGCGGGAGCGGCTGACGGCGCGGTGGGCGATGCGCAAGCTCGCCGAGGGCGCGGCGGCGGACGTGCTGGACCCGCACCTGCCGCGGACGCCGGCGACGGCGCGCGCCGCGGAGATGGTGATGGAGCTGGCGTTCCGGTGCCTCGCCCCCGTGAGGCAGGAGAGGCCGAGCATGGGCGAGTGCTGCAGGGCGCTGTGGGCGGTCAGGAAGACGTACAGGGACATGGTGGTGGCCGCCGCCGGCGACGAGACGCCGCTCTCGTCCATCTCCGACCGGGCCAGCTCGTCGTCCGCCGGCACCGGCGGCGACCGGAGCGGCGAGCTCTGGAGGAATTAATCAACGTTTTGCTGTAAATATGCAAAAGCGAAAGTATTCGTTAAAATTCTGCTCATGTGTTGATGTTGTTTGTGAATTGTGATCGAGCTAATCGCTGACACGATACGGTTGGAATGTGATTTTGCCTTC                                                                                                                                                    ]
[+] EMBL AK099147             [                     GCGCGTTGGGAGCTCTGAGCGGAGGCGGGCGGCTGCGCGGCCATGGAGGGACGCGAGCGCCGCCGCAGCATGTCGTCCTCGTCGTCCGGGAGGCGCACGCCGGAGCTGGAGAGGGAGCGATGGGCGCCGTGGAGCCCCGCCCCCACGTGGTCGCGGCCGCTCTCCGTCGGGGGCGGCGGCAGTAGGGCGGCGTCGCTCAAGTCGCTCTTCAGGACGATCGGGTTGTGGTTCAGCTCGCTCTCCACCTCCTCCTCCTCCTCGTCGTCGGCGGCGGCCACCTCCGCCTCCGGCAGCAACGCTAAGAGGAGGAGCAGAAGAGAGCCCAATGACTTGATCAAGAAGCCGCCATTGCCGGGGCCTGGCAGTGATCAGGGGAAGGCGTCGATGCGCGGGCTGTACAACAGCAGCAGGGGAAGAGGCATCGCGACGCAGTTCCAGAGCTCGGTGTTCTCCATGGAGGAGATCCTGCGCGCCACCAACAACTTCTCGCCGGCGCTCAAGGTCGGCCAGGGCGGCTTCGGCGCCGTCTACAGGGGCGTCCTCCCCGACGGCACGCTCGTCGCCGTCAAGCGCGCCAAGCTCCGGGACCAGAACCCGCACGTGGACGTGGAGTTCCGGAGCGAGGTGAAGGCCATGGCGCGCATCGAGCACCAGAGCCTCGTCCGCTTCTACGGCTACCTCGAGTGCGGCCAGGAGAGGGTCATCGTCGTCGAGTTCGTCCCCAACGGCACGCTCCGCGAGCACCTCGACAGGTGCAAC GGGAGGTTCTTGGACATGGGCGCGCGGCTGGAGATCGCCATCGACGTCGCGCACGCGGTGACGTACCTGCACATGTACGCCGATCACCCCATCATCCACCGCGACATCAAGTCGTCGAACGTGCTGCTCACCCCGTCGCTGCGCGCCAAGGTGGGCGACTTCGGGTTCGCGCGGCTGGGCGTCGGCGAGGCCGGCGCCGCCGACGGCGTGACGCACGTGACGACGCAGGTGAAGGGCACGGCGGGGTACCTCGACCCGGAGTACCTCAAGACGTGCCAGCTCACCGACCGGAGCGACGTCTACTCCTTCGGCGTGCTGCTGCTGGAGATCGCCTCCGGGCGGCGACCCATCGAGGCGAGGCGGGAGATGCGGGAGCGGCTGACGGCGCGGTGGGCGATGCGCAAGCTCGCCGAGGGCGCGGCGGCGGACGTGCTGGACCCGCACCTGCCGCGGACGCCGGCGACGGCGCGCGCCGCGGAGATGGTGATGGAGCTGGCGTTCCGGTGCCTCGCCCCCGTGAGGCAGGAGAGGCCGAGCATGGGCGAGTGCTGCAGGGCGCTGTGGGCGGTCAGGAAGACGTACAGGGACATGGTGGTGGCCGCCGCCGGCGACGAGACGCCGCTCTCGTCCATCTCCGACCGGGCCAGCTCGTCGTCCGCCGGCACCGGCGGCGACCGGAGCGGCGAGCTCTGGAGGAATTAATCAACGTTTTGCTGTAAATATGCAAAAGCGAAAGTATTCGTTAAAATTCTGCTCATGTGTTGATG                                                                                                                                                                                                                    ]
[+] EMBL CB665114             [                               AGCTCTGAGCGGAGGCGGGCGGCTGCGCGGCCATGGAGGGACGCGAGCGCCGCCGCAGCATGTCGTCCTCGTCGTCCGGGAGGCGCACGCCGGAGCTGGAGAGGGAGCGATGGGCGCCGTGGAGCCCCGCCCCCACGTGGTCGCGGCCGCTCTCCGTCGGGGGCGGCGGCAGTAGGGCGGCGTCGCTCAAGTCGCTCTTCAGGACGATCGGGTTGTGGTTCAGCTCGCTCTCCACCTCCTCCTCCTCCTCGTCGTCGGCGGCGGCCACCTCCGCCTCCGGCAGCAACGCTAAGAGGAGGAGCAGAAGAGAGCCCAATGACTTGATCAAGAAGCCGCCATTGCCGGGGCCTGGCAGTGATCAGGGGAAGGCGTCGATGCGCGGGCTGTACAACAGCAGCAGGGGAAGAGGCATCGCGACGCAGTTCCAGAGCTCGGTGTTCTCCATGGAGGAGATCCTGCGCGCCACCAACAACTTCTCGCCGGCGCTCAAGGTCGGCCAGGGCGGCTTCGGCGCCGTCTACAGGGGCGTCCTCCCCGACGGCACGCTCGTCGCCGTCAAGCGCGCCAAGCTCCGGGACCAGAACCCGCACGTGGACGTGGAGTTCCGGAGCGAGGTGAAGGCCATGGCGCGCATCGAGCACCAGAGCCTCGTCCGCTTCTACGGCTACCTCGAGTGCGGCCAGGAGAGGGTCATCGTCGTCGAGTTCGTCCCCAACGGCACGCTCCGCGAGCACCTCGACAGGTGCAACGGGGAGGTTCTTGGACATGGGCGCGCGGCTGGAGATCGCCATCGACGTCGCGCACGCCGTGACGTACCTGCACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB665115             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCAGGTGAAGGGCACGGCGGGGTACCTCGACCCGGAGTACCTCAAGACGTGCCAGCTCACCGACCGGAGCGACGTCTACTCCTTCGGCGTGCTGCTGCTGGAGATCGCCTCCGGGCGGCGACCCATCGAGGCGAGGCGGGAGATGCGGGAGCGGCTGACGGCGCGGTGGGCGATGCGCAAGCTCGCCGAGGGCGCGGCGGCGGACGTGCTGGACCCGCACCTGCCGCGGACGCCGGCGACGGCGCGCGCCGCGGAGATGGTGATGGAGCTGGCGTTCCGGTGCCTCGCCCCCGTGAGGCAGGAGAGGCCGAGCATGGGCGAGTGCTGCAGGGCGCTGTGGGCGGTCAGGAAGACGTACAGGGACATGGTGGTGGCCGCCGCCGGCGACGAGACGCCGCTCTCGTCCATCTCCGACCGGGCCAGCTCGTCGTCCGCCGGCACCGGCGGCGACCGGAGCGGCGAGCTCTGGAGGAATTAATCAACGTTTTGCTGTAAATATGCAAAAGCGAAAGTATTCGTTAAAATTCTGCTC TGTGTTGATGTTGTTTGTGAATTGTGATCGAGCTAATCGCTGACACGATACGGTTGGAATGTGATTTTGCCTTCGTTACTTGTCCATCTGGTTTTGTTCATCACGTTCTGGATTTACTATTAGATTAAAAAATTTTGGGGGCCATTTGTTATTACCGATGTTTTGTTTTGAACCACCTTTTAACCAATGTTTTCACTTTTAATCGGGTAAAAAAAAAAAAGA]


>consensus_7499#0 GTACGCGCCCCCTGGTGGCCGGCGCGTTGGGAGCTCTGAGCGGAGGCGGGCGGCTGCGCG GCCATGGAGGGACGCGAGCGCCGCCGCAGCATGTCGTCCTCGTCGTCCGGGAGGCGCACG CCGGAGCTGGAGAGGGAGCGATGGGCGCCGTGGAGCCCCGCCCCCACGTGGTCGCGGCCG CTCTCCGTCGGGGGCGGCGGCAGTAGGGCGGCGTCGCTCAAGTCGCTCTTCAGGACGATC GGGTTGTGGTTCAGCTCGCTCTCCACCTCCTCCTCCTCCTCGTCGTCGGCGGCGGCCACC TCCGCCTCCGGCAGCAACGCTAAGAGGAGGAGCAGAAGAGAGCCCAATGACTTGATCAAG AAGCCGCCATTGCCGGGGCCTGGCAGTGATCAGGGGAAGGCGTCGATGCGCGGGCTGTAC AACAGCAGCAGGGGAAGAGGCATCGCGACGCAGTTCCAGAGCTCGGTGTTCTCCATGGAG GAGATCCTGCGCGCCACCAACAACTTCTCGCCGGCGCTCAAGGTCGGCCAGGGCGGCTTC GGCGCCGTCTACAGGGGCGTCCTCCCCGACGGCACGCTCGTCGCCGTCAAGCGCGCCAAG CTCCGGGACCAGAACCCGCACGTGGACGTGGAGTTCCGGAGCGAGGTGAAGGCCATGGCG CGCATCGAGCACCAGAGCCTCGTCCGCTTCTACGGCTACCTCGAGTGCGGCCAGGAGAGG GTCATCGTCGTCGAGTTCGTCCCCAACGGCACGCTCCGCGAGCACCTCGACAGGTGCAAC GGGAGGTTCTTGGACATGGGCGCGCGGCTGGAGATCGCCATCGACGTCGCGCACGCGGTG ACGTACCTGCACATGTACGCCGATCACCCCATCATCCACCGCGACATCAAGTCGTCGAAC GTGCTGCTCACCCCGTCGCTGCGCGCCAAGGTGGGCGACTTCGGGTTCGCGCGGCTGGGC GTCGGCGAGGCCGGCGCCGCCGACGGCGTGACGCACGTGACGACGCAGGTGAAGGGCACG GCGGGGTACCTCGACCCGGAGTACCTCAAGACGTGCCAGCTCACCGACCGGAGCGACGTC TACTCCTTCGGCGTGCTGCTGCTGGAGATCGCCTCCGGGCGGCGACCCATCGAGGCGAGG CGGGAGATGCGGGAGCGGCTGACGGCGCGGTGGGCGATGCGCAAGCTCGCCGAGGGCGCG GCGGCGGACGTGCTGGACCCGCACCTGCCGCGGACGCCGGCGACGGCGCGCGCCGCGGAG ATGGTGATGGAGCTGGCGTTCCGGTGCCTCGCCCCCGTGAGGCAGGAGAGGCCGAGCATG GGCGAGTGCTGCAGGGCGCTGTGGGCGGTCAGGAAGACGTACAGGGACATGGTGGTGGCC GCCGCCGGCGACGAGACGCCGCTCTCGTCCATCTCCGACCGGGCCAGCTCGTCGTCCGCC GGCACCGGCGGCGACCGGAGCGGCGAGCTCTGGAGGAATTAATCAACGTTTTGCTGTAAA TATGCAAAAGCGAAAGTATTCGTTAAAATTCTGCTCATGTGTTGATGTTGTTTGTGAATT GTGATCGAGCTAATCGCTGACACGATACGGTTGGAATGTGATTTTGCCTTCGTTACTTGT CCATCTGGTTTTGTTCATCACGTTCTGGATTTACTATTAGATTAAAAAATTTTGGGGGCC ATTTGTTATTACCGATGTTTTGTTTTGAACCACCTTTTAACCAATGTTTTCACTTTTAAT CGGGTAAAAAAAAAAAAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)