Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7522 cluster # 7522       Sequences # 4       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7522#0 length = 3746 sequences # 1  
consensus_7522#1 length = 1479 sequences # 1  
consensus_7522#2 length = 1119 sequences # 1  
consensus_7522#3 length = 635 sequences # 1  

consensusID : consensus_7522#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3746
fasta sequence
                              [TTCCGGAGTTGGCGTCTCGGACGGCAAGGTTCGAGCTATCCTGTTGTTTTACAAAATGCCCCCTGATTCATGTCTATACTCTATACCAATTCTCTTATTTTTGCAAAATAACCCCTACTAGTTCTATCGGTCCTGCTATTTTGCAAAGTAGTCCTCCTCTCTTCCGCCTCGTCCCCGTCAAACCCTTGCCGGCGGCGGCCGCCGGCCGGAGAGGCGGATGGCGTCGTCGATCTCCTGCGCGCGGCCCTCGCCCGCCGCCGCTTCATCGCCTCTAGCTCCGGCAGCCTGACGTCACCGTCCCTCCCCTCCTTGGATTGCAGCAGTAGGCTAACAAGATCATGAAACGAGCTCCCCCTCCACCCCACATTCCGGCGATCCCCCCCACCCTACCTGACCTAGGCCAATGAGAGTATCGTCCCCGTGCCGTCGGTGAACGGCGGAGTAAGATTCGCCGGCGAGGTTAAGTATTGTTCCTGACTTTCTTCTTCCAAGGTGACAGCCTCGAGAAGGCTGTCCCCATTGAATCCATGTTACTGCTACCCAACAAATGTGGCTGGGTGATGAACAGAAACAGTGTTGGCGTTTTCTCGATTAAGATGAGATCAGTGCGGGTTCAAGGTGTGAAAGCGGAGGATTTGAAGATGCAGTTATTCAGCTATTTTTTCCTTGCATGATCTTCTGATTCAGGCCCCACTTGGAACGCCGGGAATTTCTTTTTTCAGTTCCAGTTAAATTCCTATTGTTAAAACGAGGCCTTCAGTATGCAATAGATTTGCTGGTTAGGATCCAACCTTTCACTCCAAGGAAAAAAATTATAAGCATATACTGGAAACAGAGGCATTTTACCACTACATGTTTAATTAGAACTGGGTGTTCATACAAGTTGGTACGATTTTTACACGTAGGGATAAGAGAATGCTCTCGACAACATTTCTAAGGGCTCTTATTCAACTAGTTAAAGCACATCACCTAGCTGGGAGCCATGAAAAATGTCACCTAGATAATTACAGTGCTGGCCATTATTCCACCAGTTAAAGCAGATTTTGAACCACTTGGCTCATGCTTGGTCTTTGGCTCCTCTCCTCTTCCACGCATGAAACTGCTATCTTTAACATCTTGACTGCTTGTGAATAATTAAACTCTCCTTCCAGTCTGCCATCAACAAACTCCAAGAGCCATGACTGATCTTCGTTTACCAATTTCTCTTTGAGAATATCAGCAGTGCGTTTAACGCCCAGTTCCACCTTCTCACCCTCAACCATCCATCTTGAAACCCGAATCCCCTTCACTAACTCAAGAAGCACAACTCCATAGCTGAAAACATCAGCCTTGCCTGTGATCGGAAGATTTAGAACCCATTCTGGTGCAATGTACCCTCTAGTTCCATGCACTCTTGACAACATTAGTGCAGTTCCTTGCTTAAGTAGTTTGAGCCAGTCCAAAATCTGCAATCTTTGGCTCAAAGTCTTTATCTAACAATATGTTTTCTGGTTTGATATCGCAGTGTACGATCCATTCAAGACACTCATGGTGAAGATATGCCAGTCCTTTTGCTACGCCAATTGCAATATTGTACCGTTGGTTCCTTTTTAGCAAAGGAAATAAGTTCTGATGGTCAAACACAAGTCTGTCTAAAGAACCATTCTCAATGTACTCAGAAACCAAGAGCCTACTTGTCTTCTCTGCACAGAACCCCCAAACTCTAACCAGATTCATATGATATATTCTTCCTATGACACTTAGCTCAGACCTTAACTCCTGCTCTCCATAGATCACATCATTTAGCTTTTTCACTGCAACCTGCCTTTCATCATCGAGGACTCCCTTGTAAACCACACCTGATCCACCATTCCCGCTCTTCCTGAAAACAATTGGTTGCCTTGTGTAACTCCTTGTAGCTGAATCTTCGGAATTGGCTAGAAATGATCATGTAACCTTCGTCAGTAATCTCTGATATTGTCTCCCATTTTTTAACAACTGAAAAGCCAGCAACAATTAAAACCACTTCAATCAAAAGCACTGTTAACAGAGAAGAAAGGAAGTAACCAAACATGAACTTGGATGGGACATCTTCGAGCATTTGTGATGAAGGGTAGGCTAATTTTTCAGTAACTCCACAAGAATGGGTTAGTCTAGAATCTGATTCTTTGGTAAACGGCACCCCCTTAGGAACTTTCAGGTAGATGTCATTGTAAGGATCTGGGAAGCTCCTGCCATTGAAAAGCGTGTACTTTGGGTAACATAGGCCAGTTCTCCTTCGGTAACCGAAGGCTTGGCATTTAGCGTTGGCCAGGCACATATTTCTACAGTTTGAGAACGGCACTGACTCTGCGTAGTCCATGTCATATCCCCAGAAGTCAGTTCCAGTGTTCTTTCTGAATGAAAAGTCCCGGCTGATAGTGTTGTTTGTATTTGTTCTATTCCCTTTATCCCAGATGACTGTCATGTCTGCCTTGCGCTTGCACCCTTTGCTCCAGTCACTCGGATCAATCACCTCGAAGCCTTGGAGTCAAGAACAATGGAGTCTCGGGATGTAATTGCAGATGCTGTTTATACCACACACTCCATGCATTTGGCATAATCTAGAGAATGCCATCCAAGAAACTGACCAGTTGCCACTGGTCTCGTTTAGGCTGTACAGCCTAAGATTTCCATCGTAATCCAGAGTCAACCTCCTCATGACATGATCGCCAAGATCAGAGTCTTCAAACTTAAATAGGTCACTTGATACAAAACGACCTGTCTGATTTAGAACCCCATATCGGCGACTGTCATAAGTTGTCCTTCCATTCTTCCATGGCAGGTGAACCGAAGGATTTGGCCAATATATGCTGGCAGTGTCAGGGCCATTGTAGACGAGAGTCAAAATATTGTTACTGTCGAAGAGAAAGTTGTAGAAGCCTGAATATAACCAACCCCTGGCAGATGCAGATACCAGCTTTACATTCCTAGTTATTGGTTGCAACGGCAGAAGTGTGTCTGTTGGCGAGTCGAAGCTCCTCCATAGATGCTGGCCTTGTAGGTCCATGACCACAAGGTTTCCATTGTTGAGAAGCTCTGCTCGATTTGCTTGAGTGGCTGTTGTGTTGGTGCTCCATACAACTTTGCCATTGTAGTCAAGAAGGGCCAAGGTCCCGTCGTTCTGGAAGGTGAGCCTGGAGCCCTTGCCATTCACCGGAGCATCGCGGTTCGCCGTCCAAGCGACAGTCTTCTCTGACGACCTGGAAAACCAGATGGAGAAGGTGAAGGCGTTGGTGGCCACCTTGTAGAAGCCACAGGAGAAATCGTCATTGGGGGACACTAGGATGGCGGTGGTGTCATCCTGGGTTGAAATGGATGAACGCCTAGTAAGAAAGCTCTTTTGATCTTTTGCAACAGCAGTGGGGAGCATGAGAAGGAAGGATATCACTGTGGTGAAAATGCAGAAGCCTCTCACGGCGACGTTTTGCTACGGCATGCATGAACTTAAACATGAATGATGAAAGCGAGCAAACGGCCAGTCGTTGATTCAGCATGTCCAGGACGGCGTTGCCGAGTACCACATGCCTGCTTGGCTCCGTTGCTGTCTGATTCCCCCAGGTGTCTGGTGACAAACAGAACGTTGTATTGGACAGGGTTATGGCATTCAAACCAGAATATTTGACTGGTAATTTCTATGTAATATGTTAGGAATATTTATAGAACCGTTATACTTATGATAGATAAGTATTATGAAAGTGATGTCTGAGAAATATACTGGGATAATT]

[+] EMBL AK102554             [TTCCGGAGTTGGCGTCTCGGACGGCAAGGTTCGAGCTATCCTGTTGTTTTACAAAATGCCCCCTGATTCATGTCTATACTCTATACCAATTCTCTTATTTTTGCAAAATAACCCCTACTAGTTCTATCGGTCCTGCTATTTTGCAAAGTAGTCCTCCTCTCTTCCGCCTCGTCCCCGTCAAACCCTTGCCGGCGGCGGCCGCCGGCCGGAGAGGCGGATGGCGTCGTCGATCTCCTGCGCGCGGCCCTCGCCCGCCGCCGCTTCATCGCCTCTAGCTCCGGCAGCCTGACGTCACCGTCCCTCCCCTCCTTGGATTGCAGCAGTAGGCTAACAAGATCATGAAACGAGCTCCCCCTCCACCCCACATTCCGGCGATCCCCCCCACCCTACCTGACCTAGGCCAATGAGAGTATCGTCCCCGTGCCGTCGGTGAACGGCGGAGTAAGATTCGCCGGCGAGGTTAAGTATTGTTCCTGACTTTCTTCTTCCAAGGTGACAGCCTCGAGAAGGCTGTCCCCATTGAATCCATGTTACTGCTACCCAACAAATGTGGCTGGGTGATGAACAGAAACAGTGTTGGCGTTTTCTCGATTAAGATGAGATCAGTGCGGGTTCAAGGTGTGAAAGCGGAGGATTTGAAGATGCAGTTATTCAGCTATTTTTTCCTTGCATGATCTTCTGATTCAGGCCCCACTTGGAACGCCGGGAATTTCTTTTTTCAGTTCCAGTTAAATTCCTATTGTTAAAACGAGGCCTTCAGTATGCAATAGATTTGCTGGTTAGGATCCAACCTTTCACTCCAAGGAAAAAAATTATAAGCATATACTGGAAACAGAGGCATTTTACCACTACATGTTTAATTAGAACTGGGTGTTCATACAAGTTGGTACGATTTTTACACGTAGGGATAAGAGAATGCTCTCGACAACATTTCTAAGGGCTCTTATTCAACTAGTTAAAGCACATCACCTAGCTGGGAGCCATGAAAAATGTCACCTAGATAATTACAGTGCTGGCCATTATTCCACCAGTTAAAGCAGATTTTGAACCACTTGGCTCATGCTTGGTCTTTGGCTCCTCTCCTCTTCCACGCATGAAACTGCTATCTTTAACATCTTGACTGCTTGTGAATAATTAAACTCTCCTTCCAGTCTGCCATCAACAAACTCCAAGAGCCATGACTGATCTTCGTTTACCAATTTCTCTTTGAGAATATCAGCAGTGCGTTTAACGCCCAGTTCCACCTTCTCACCCTCAACCATCCATCTTGAAACCCGAATCCCCTTCACTAACTCAAGAAGCACAACTCCATAGCTGAAAACATCAGCCTTGCCTGTGATCGGAAGATTTAGAACCCATTCTGGTGCAATGTACCCTCTAGTTCCATGCACTCTTGACAACATTAGTGCAGTTCCTTGCTTAAGTAGTTTGAGCCAGTCCAAAATCTGCAATCTTTGGCTCAAAGTCTTTATCTAACAATATGTTTTCTGGTTTGATATCGCAGTGTACGATCCATTCAAGACACTCATGGTGAAGATATGCCAGTCCTTTTGCTACGCCAATTGCAATATTGTACCGTTGGTTCCTTTTTAGCAAAGGAAATAAGTTCTGATGGTCAAACACAAGTCTGTCTAAAGAACCATTCTCAATGTACTCAGAAACCAAGAGCCTACTTGTCTTCTCTGCACAGAACCCCCAAACTCTAACCAGATTCATATGATATATTCTTCCTATGACACTTAGCTCAGACCTTAACTCCTGCTCTCCATAGATCACATCATTTAGCTTTTTCACTGCAACCTGCCTTTCATCATCGAGGACTCCCTTGTAAACCACACCTGATCCACCATTCCCGCTCTTCCTGAAAACAATTGGTTGCCTTGTGTAACTCCTTGTAGCTGAATCTTCGGAATTGGCTAGAAATGATCATGTAACCTTCGTCAGTAATCTCTGATATTGTCTCCCATTTTTTAACAACTGAAAAGCCAGCAACAATTAAAACCACTTCAATCAAAAGCACTGTTAACAGAGAAGAAAGGAAGTAACCAAACATGAACTTGGATGGGACATCTTCGAGCATTTGTGATGAAGGGTAGGCTAATTTTTCAGTAACTCCACAAGAATGGGTTAGTCTAGAATCTGATTCTTTGGTAAACGGCACCCCCTTAGGAACTTTCAGGTAGATGTCATTGTAAGGATCTGGGAAGCTCCTGCCATTGAAAAGCGTGTACTTTGGGTAACATAGGCCAGTTCTCCTTCGGTAACCGAAGGCTTGGCATTTAGCGTTGGCCAGGCACATATTTCTACAGTTTGAGAACGGCACTGACTCTGCGTAGTCCATGTCATATCCCCAGAAGTCAGTTCCAGTGTTCTTTCTGAATGAAAAGTCCCGGCTGATAGTGTTGTTTGTATTTGTTCTATTCCCTTTATCCCAGATGACTGTCATGTCTGCCTTGCGCTTGCACCCTTTGCTCCAGTCACTCGGATCAATCACCTCGAAGCCTTGGAGTCAAGAACAATGGAGTCTCGGGATGTAATTGCAGATGCTGTTTATACCACACACTCCATGCATTTGGCATAATCTAGAGAATGCCATCCAAGAAACTGACCAGTTGCCACTGGTCTCGTTTAGGCTGTACAGCCTAAGATTTCCATCGTAATCCAGAGTCAACCTCCTCATGACATGATCGCCAAGATCAGAGTCTTCAAACTTAAATAGGTCACTTGATACAAAACGACCTGTCTGATTTAGAACCCCATATCGGCGACTGTCATAAGTTGTCCTTCCATTCTTCCATGGCAGGTGAACCGAAGGATTTGGCCAATATATGCTGGCAGTGTCAGGGCCATTGTAGACGAGAGTCAAAATATTGTTACTGTCGAAGAGAAAGTTGTAGAAGCCTGAATATAACCAACCCCTGGCAGATGCAGATACCAGCTTTACATTCCTAGTTATTGGTTGCAACGGCAGAAGTGTGTCTGTTGGCGAGTCGAAGCTCCTCCATAGATGCTGGCCTTGTAGGTCCATGACCACAAGGTTTCCATTGTTGAGAAGCTCTGCTCGATTTGCTTGAGTGGCTGTTGTGTTGGTGCTCCATACAACTTTGCCATTGTAGTCAAGAAGGGCCAAGGTCCCGTCGTTCTGGAAGGTGAGCCTGGAGCCCTTGCCATTCACCGGAGCATCGCGGTTCGCCGTCCAAGCGACAGTCTTCTCTGACGACCTGGAAAACCAGATGGAGAAGGTGAAGGCGTTGGTGGCCACCTTGTAGAAGCCACAGGAGAAATCGTCATTGGGGGACACTAGGATGGCGGTGGTGTCATCCTGGGTTGAAATGGATGAACGCCTAGTAAGAAAGCTCTTTTGATCTTTTGCAACAGCAGTGGGGAGCATGAGAAGGAAGGATATCACTGTGGTGAAAATGCAGAAGCCTCTCACGGCGACGTTTTGCTACGGCATGCATGAACTTAAACATGAATGATGAAAGCGAGCAAACGGCCAGTCGTTGATTCAGCATGTCCAGGACGGCGTTGCCGAGTACCACATGCCTGCTTGGCTCCGTTGCTGTCTGATTCCCCCAGGTGTCTGGTGACAAACAGAACGTTGTATTGGACAGGGTTATGGCATTCAAACCAGAATATTTGACTGGTAATTTCTATGTAATATGTTAGGAATATTTATAGAACCGTTATACTTATGATAGATAAGTATTATGAAAGTGATGTCTGAGAAATATACTGGGATAATT]


>consensus_7522#0 TTCCGGAGTTGGCGTCTCGGACGGCAAGGTTCGAGCTATCCTGTTGTTTTACAAAATGCC CCCTGATTCATGTCTATACTCTATACCAATTCTCTTATTTTTGCAAAATAACCCCTACTA GTTCTATCGGTCCTGCTATTTTGCAAAGTAGTCCTCCTCTCTTCCGCCTCGTCCCCGTCA AACCCTTGCCGGCGGCGGCCGCCGGCCGGAGAGGCGGATGGCGTCGTCGATCTCCTGCGC GCGGCCCTCGCCCGCCGCCGCTTCATCGCCTCTAGCTCCGGCAGCCTGACGTCACCGTCC CTCCCCTCCTTGGATTGCAGCAGTAGGCTAACAAGATCATGAAACGAGCTCCCCCTCCAC CCCACATTCCGGCGATCCCCCCCACCCTACCTGACCTAGGCCAATGAGAGTATCGTCCCC GTGCCGTCGGTGAACGGCGGAGTAAGATTCGCCGGCGAGGTTAAGTATTGTTCCTGACTT TCTTCTTCCAAGGTGACAGCCTCGAGAAGGCTGTCCCCATTGAATCCATGTTACTGCTAC CCAACAAATGTGGCTGGGTGATGAACAGAAACAGTGTTGGCGTTTTCTCGATTAAGATGA GATCAGTGCGGGTTCAAGGTGTGAAAGCGGAGGATTTGAAGATGCAGTTATTCAGCTATT TTTTCCTTGCATGATCTTCTGATTCAGGCCCCACTTGGAACGCCGGGAATTTCTTTTTTC AGTTCCAGTTAAATTCCTATTGTTAAAACGAGGCCTTCAGTATGCAATAGATTTGCTGGT TAGGATCCAACCTTTCACTCCAAGGAAAAAAATTATAAGCATATACTGGAAACAGAGGCA TTTTACCACTACATGTTTAATTAGAACTGGGTGTTCATACAAGTTGGTACGATTTTTACA CGTAGGGATAAGAGAATGCTCTCGACAACATTTCTAAGGGCTCTTATTCAACTAGTTAAA GCACATCACCTAGCTGGGAGCCATGAAAAATGTCACCTAGATAATTACAGTGCTGGCCAT TATTCCACCAGTTAAAGCAGATTTTGAACCACTTGGCTCATGCTTGGTCTTTGGCTCCTC TCCTCTTCCACGCATGAAACTGCTATCTTTAACATCTTGACTGCTTGTGAATAATTAAAC TCTCCTTCCAGTCTGCCATCAACAAACTCCAAGAGCCATGACTGATCTTCGTTTACCAAT TTCTCTTTGAGAATATCAGCAGTGCGTTTAACGCCCAGTTCCACCTTCTCACCCTCAACC ATCCATCTTGAAACCCGAATCCCCTTCACTAACTCAAGAAGCACAACTCCATAGCTGAAA ACATCAGCCTTGCCTGTGATCGGAAGATTTAGAACCCATTCTGGTGCAATGTACCCTCTA GTTCCATGCACTCTTGACAACATTAGTGCAGTTCCTTGCTTAAGTAGTTTGAGCCAGTCC AAAATCTGCAATCTTTGGCTCAAAGTCTTTATCTAACAATATGTTTTCTGGTTTGATATC GCAGTGTACGATCCATTCAAGACACTCATGGTGAAGATATGCCAGTCCTTTTGCTACGCC AATTGCAATATTGTACCGTTGGTTCCTTTTTAGCAAAGGAAATAAGTTCTGATGGTCAAA CACAAGTCTGTCTAAAGAACCATTCTCAATGTACTCAGAAACCAAGAGCCTACTTGTCTT CTCTGCACAGAACCCCCAAACTCTAACCAGATTCATATGATATATTCTTCCTATGACACT TAGCTCAGACCTTAACTCCTGCTCTCCATAGATCACATCATTTAGCTTTTTCACTGCAAC CTGCCTTTCATCATCGAGGACTCCCTTGTAAACCACACCTGATCCACCATTCCCGCTCTT CCTGAAAACAATTGGTTGCCTTGTGTAACTCCTTGTAGCTGAATCTTCGGAATTGGCTAG AAATGATCATGTAACCTTCGTCAGTAATCTCTGATATTGTCTCCCATTTTTTAACAACTG AAAAGCCAGCAACAATTAAAACCACTTCAATCAAAAGCACTGTTAACAGAGAAGAAAGGA AGTAACCAAACATGAACTTGGATGGGACATCTTCGAGCATTTGTGATGAAGGGTAGGCTA ATTTTTCAGTAACTCCACAAGAATGGGTTAGTCTAGAATCTGATTCTTTGGTAAACGGCA CCCCCTTAGGAACTTTCAGGTAGATGTCATTGTAAGGATCTGGGAAGCTCCTGCCATTGA AAAGCGTGTACTTTGGGTAACATAGGCCAGTTCTCCTTCGGTAACCGAAGGCTTGGCATT TAGCGTTGGCCAGGCACATATTTCTACAGTTTGAGAACGGCACTGACTCTGCGTAGTCCA TGTCATATCCCCAGAAGTCAGTTCCAGTGTTCTTTCTGAATGAAAAGTCCCGGCTGATAG TGTTGTTTGTATTTGTTCTATTCCCTTTATCCCAGATGACTGTCATGTCTGCCTTGCGCT TGCACCCTTTGCTCCAGTCACTCGGATCAATCACCTCGAAGCCTTGGAGTCAAGAACAAT GGAGTCTCGGGATGTAATTGCAGATGCTGTTTATACCACACACTCCATGCATTTGGCATA ATCTAGAGAATGCCATCCAAGAAACTGACCAGTTGCCACTGGTCTCGTTTAGGCTGTACA GCCTAAGATTTCCATCGTAATCCAGAGTCAACCTCCTCATGACATGATCGCCAAGATCAG AGTCTTCAAACTTAAATAGGTCACTTGATACAAAACGACCTGTCTGATTTAGAACCCCAT ATCGGCGACTGTCATAAGTTGTCCTTCCATTCTTCCATGGCAGGTGAACCGAAGGATTTG GCCAATATATGCTGGCAGTGTCAGGGCCATTGTAGACGAGAGTCAAAATATTGTTACTGT CGAAGAGAAAGTTGTAGAAGCCTGAATATAACCAACCCCTGGCAGATGCAGATACCAGCT TTACATTCCTAGTTATTGGTTGCAACGGCAGAAGTGTGTCTGTTGGCGAGTCGAAGCTCC TCCATAGATGCTGGCCTTGTAGGTCCATGACCACAAGGTTTCCATTGTTGAGAAGCTCTG CTCGATTTGCTTGAGTGGCTGTTGTGTTGGTGCTCCATACAACTTTGCCATTGTAGTCAA GAAGGGCCAAGGTCCCGTCGTTCTGGAAGGTGAGCCTGGAGCCCTTGCCATTCACCGGAG CATCGCGGTTCGCCGTCCAAGCGACAGTCTTCTCTGACGACCTGGAAAACCAGATGGAGA AGGTGAAGGCGTTGGTGGCCACCTTGTAGAAGCCACAGGAGAAATCGTCATTGGGGGACA CTAGGATGGCGGTGGTGTCATCCTGGGTTGAAATGGATGAACGCCTAGTAAGAAAGCTCT TTTGATCTTTTGCAACAGCAGTGGGGAGCATGAGAAGGAAGGATATCACTGTGGTGAAAA TGCAGAAGCCTCTCACGGCGACGTTTTGCTACGGCATGCATGAACTTAAACATGAATGAT GAAAGCGAGCAAACGGCCAGTCGTTGATTCAGCATGTCCAGGACGGCGTTGCCGAGTACC ACATGCCTGCTTGGCTCCGTTGCTGTCTGATTCCCCCAGGTGTCTGGTGACAAACAGAAC GTTGTATTGGACAGGGTTATGGCATTCAAACCAGAATATTTGACTGGTAATTTCTATGTA ATATGTTAGGAATATTTATAGAACCGTTATACTTATGATAGATAAGTATTATGAAAGTGA TGTCTGAGAAATATACTGGGATAATT



consensusID : consensus_7522#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1479
fasta sequence
                              [GATATGGGATGGTTTAGAAGCCAATAGTTGTGAAGACGACGCCTCCTTGGAAAATTTTAGATAAATATCATTGCTAGGATCTGGGAATTTCTTGCCATTGATAAGCAAAGCCTTCGGGAAACATTCACCTTTTCCCTTCCGATATGCAAAAGCTTCGCAGCCATCATCGTTCAAGCAAATCTGTTTGCAGACTGGCAATGCGACAGATGGGGTGTAGTTGAAGTCATACCCATAGAAGTCAGTCTTGGGGATCTCCACGAATATGAATTTTTGCTCTGTATTGTTGTTTGCGTTATGATCCCCTTTGACTGTGATGTTTTCCTTGTGCCTGCACCCTTGGCTCCAGTAACTAGGTTCAGTCATCTCGAAACCTTCGAGGCAGGAACACTGAAGGCTTGGCATGTATGTGCAGAAGCTGTTTATGCCACACAGACCATGTATCTCACAGAGTCGAGGGAATGCCAGCCAAGAGACTGACCATTTACCATTCGTTGCGTTTAAGCTATATAGCCTTAGGTTACCATCATAATCGAGTGTCAACCTCCTCATGACATCCTAATCACCAAGATCAGACGCTTCAAATTGAAGCTTGTCACTAGCTAAGAACATGCCTTCCTGATTGAGAATCCCATATTGGCTGCTGTTATAAGTAGTCCTACCATTCTCCCACGACCGCTCATAAGGATTAGGCCAATATATGCTGCTAGTCTTAGGGCCATTGTATATGATACTCAATATGTTGTTACTGTCAAAGAAGAAGGTGTACAAGCCTGAGTAAGGCAAGCCCCTGGCAGATGCAGATACCAGCTTTGTATCTCGAGTCATCGGCTGCAATGGGAGGAGCGTGTCGGTCGGTGAATCGAAGCTCTTCCAGAGGCGATGACCGGCTGGATCCATGACGACGAGGTTGCCGCTGTCGTCAAGCTCTGCACGGCTAGCGCCAGTGGCCGTGGTGTTGGTGCTCCACACAACCGTGCCGTTGTAATCAACAAGGGCCAGGCTCCCGTCCTTCCGGAAGGTGAGCTTGGAGCCCTTGCCGTTCACCGGAGCGTCGCGGTTCGCCGTCCACGCGACGGTCTTCTCCGACGACCTGGAGAACCAGATGGAGAAGGTGAAGGCGTTGGTGGCCACCTTGTAGAAGCCACATGAGAAGTGGCCATTGGGGGACACAAGGATGGTGGTGGTGTCATCTTGGGTGGAGATTGAGGAACCCCTTGCAAGGGAGCTTCTCTGATCTTCTGCAAGAGCAATGGTGAGCGCGAGAAGGAAGGAGATCGATGTGGTGAAAATGCTGACGCCTCTCATGGCCACGGCAAGCAACTGCTTTCCATGGAATGCAAGGGAAACTGGTACATATGTTATTATATGTATCAAGATTGTGCCCATTATTACTGTGACAACTTGTCGTAGATCGTGTACACTAATCCTGTTGCTACAGCCTAATATTCCCTTCGTCCCAAAATAAATTCATTTGTGGGT]

[+] EMBL AK119484             [GATATGGGATGGTTTAGAAGCCAATAGTTGTGAAGACGACGCCTCCTTGGAAAATTTTAGATAAATATCATTGCTAGGATCTGGGAATTTCTTGCCATTGATAAGCAAAGCCTTCGGGAAACATTCACCTTTTCCCTTCCGATATGCAAAAGCTTCGCAGCCATCATCGTTCAAGCAAATCTGTTTGCAGACTGGCAATGCGACAGATGGGGTGTAGTTGAAGTCATACCCATAGAAGTCAGTCTTGGGGATCTCCACGAATATGAATTTTTGCTCTGTATTGTTGTTTGCGTTATGATCCCCTTTGACTGTGATGTTTTCCTTGTGCCTGCACCCTTGGCTCCAGTAACTAGGTTCAGTCATCTCGAAACCTTCGAGGCAGGAACACTGAAGGCTTGGCATGTATGTGCAGAAGCTGTTTATGCCACACAGACCATGTATCTCACAGAGTCGAGGGAATGCCAGCCAAGAGACTGACCATTTACCATTCGTTGCGTTTAAGCTATATAGCCTTAGGTTACCATCATAATCGAGTGTCAACCTCCTCATGACATCCTAATCACCAAGATCAGACGCTTCAAATTGAAGCTTGTCACTAGCTAAGAACATGCCTTCCTGATTGAGAATCCCATATTGGCTGCTGTTATAAGTAGTCCTACCATTCTCCCACGACCGCTCATAAGGATTAGGCCAATATATGCTGCTAGTCTTAGGGCCATTGTATATGATACTCAATATGTTGTTACTGTCAAAGAAGAAGGTGTACAAGCCTGAGTAAGGCAAGCCCCTGGCAGATGCAGATACCAGCTTTGTATCTCGAGTCATCGGCTGCAATGGGAGGAGCGTGTCGGTCGGTGAATCGAAGCTCTTCCAGAGGCGATGACCGGCTGGATCCATGACGACGAGGTTGCCGCTGTCGTCAAGCTCTGCACGGCTAGCGCCAGTGGCCGTGGTGTTGGTGCTCCACACAACCGTGCCGTTGTAATCAACAAGGGCCAGGCTCCCGTCCTTCCGGAAGGTGAGCTTGGAGCCCTTGCCGTTCACCGGAGCGTCGCGGTTCGCCGTCCACGCGACGGTCTTCTCCGACGACCTGGAGAACCAGATGGAGAAGGTGAAGGCGTTGGTGGCCACCTTGTAGAAGCCACATGAGAAGTGGCCATTGGGGGACACAAGGATGGTGGTGGTGTCATCTTGGGTGGAGATTGAGGAACCCCTTGCAAGGGAGCTTCTCTGATCTTCTGCAAGAGCAATGGTGAGCGCGAGAAGGAAGGAGATCGATGTGGTGAAAATGCTGACGCCTCTCATGGCCACGGCAAGCAACTGCTTTCCATGGAATGCAAGGGAAACTGGTACATATGTTATTATATGTATCAAGATTGTGCCCATTATTACTGTGACAACTTGTCGTAGATCGTGTACACTAATCCTGTTGCTACAGCCTAATATTCCCTTCGTCCCAAAATAAATTCATTTGTGGGT]


>consensus_7522#1 GATATGGGATGGTTTAGAAGCCAATAGTTGTGAAGACGACGCCTCCTTGGAAAATTTTAG ATAAATATCATTGCTAGGATCTGGGAATTTCTTGCCATTGATAAGCAAAGCCTTCGGGAA ACATTCACCTTTTCCCTTCCGATATGCAAAAGCTTCGCAGCCATCATCGTTCAAGCAAAT CTGTTTGCAGACTGGCAATGCGACAGATGGGGTGTAGTTGAAGTCATACCCATAGAAGTC AGTCTTGGGGATCTCCACGAATATGAATTTTTGCTCTGTATTGTTGTTTGCGTTATGATC CCCTTTGACTGTGATGTTTTCCTTGTGCCTGCACCCTTGGCTCCAGTAACTAGGTTCAGT CATCTCGAAACCTTCGAGGCAGGAACACTGAAGGCTTGGCATGTATGTGCAGAAGCTGTT TATGCCACACAGACCATGTATCTCACAGAGTCGAGGGAATGCCAGCCAAGAGACTGACCA TTTACCATTCGTTGCGTTTAAGCTATATAGCCTTAGGTTACCATCATAATCGAGTGTCAA CCTCCTCATGACATCCTAATCACCAAGATCAGACGCTTCAAATTGAAGCTTGTCACTAGC TAAGAACATGCCTTCCTGATTGAGAATCCCATATTGGCTGCTGTTATAAGTAGTCCTACC ATTCTCCCACGACCGCTCATAAGGATTAGGCCAATATATGCTGCTAGTCTTAGGGCCATT GTATATGATACTCAATATGTTGTTACTGTCAAAGAAGAAGGTGTACAAGCCTGAGTAAGG CAAGCCCCTGGCAGATGCAGATACCAGCTTTGTATCTCGAGTCATCGGCTGCAATGGGAG GAGCGTGTCGGTCGGTGAATCGAAGCTCTTCCAGAGGCGATGACCGGCTGGATCCATGAC GACGAGGTTGCCGCTGTCGTCAAGCTCTGCACGGCTAGCGCCAGTGGCCGTGGTGTTGGT GCTCCACACAACCGTGCCGTTGTAATCAACAAGGGCCAGGCTCCCGTCCTTCCGGAAGGT GAGCTTGGAGCCCTTGCCGTTCACCGGAGCGTCGCGGTTCGCCGTCCACGCGACGGTCTT CTCCGACGACCTGGAGAACCAGATGGAGAAGGTGAAGGCGTTGGTGGCCACCTTGTAGAA GCCACATGAGAAGTGGCCATTGGGGGACACAAGGATGGTGGTGGTGTCATCTTGGGTGGA GATTGAGGAACCCCTTGCAAGGGAGCTTCTCTGATCTTCTGCAAGAGCAATGGTGAGCGC GAGAAGGAAGGAGATCGATGTGGTGAAAATGCTGACGCCTCTCATGGCCACGGCAAGCAA CTGCTTTCCATGGAATGCAAGGGAAACTGGTACATATGTTATTATATGTATCAAGATTGT GCCCATTATTACTGTGACAACTTGTCGTAGATCGTGTACACTAATCCTGTTGCTACAGCC TAATATTCCCTTCGTCCCAAAATAAATTCATTTGTGGGT



consensusID : consensus_7522#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1119
fasta sequence
                              [CCATGCATTTGACATACTCTAGAGAATGCCATCCAAGAAACTGAACAGTTGCCACTGGTCTCGTTTAGGCTGTACAGCCTAAGATTTCCATCGTAATCCAGTGTCAACCTCCTCATGACATGATCGCCAAGATCAGAGGCTTCAAACTTAAAAAGGTCACTTGATACAAAATAACCTGTCTGATTTAGAACACCATATCGAAGACTGTCATAAGTTGTCCTTCCATTCTTCCATGGCTGGTCAAAGGAAGGATTTGGCCAATATATGCTGGCAGTGTCTGGGCCGTTGTAGACGAGAGTCAAAATATTGTTACTGTCGAAGAGAAAGTTGTAGAAGCCTGAATATAGCAGCCCCCTGGCAGATGCATATACCAGCTTTACATTCCTAGTTATTGGCTGCAACGGCAGAAGTGTATCTGTTGGCGAGTCGAAGCTCCTCCATAGATGCTGGCCTTCAGGATCCATGACAACAAGGTTTCCATTGTTGAGAAGCTCTGCTCGGTCGGCTCGAGTGGCTGTTGTGTTGGTGCTCCATACAACTTTGCCATTGTAGTCAAGAAGGGCCAAGGTGCCGTCCTTCTGGAAGGTGAGCCTGGAACCCTTTCCGTTCACCGGAGCATCGCGGTTCGCCGTCCAAGCGACCGTCTTCTCCGACGACCTGGAGAACCAGATGGAGAAGGTGAATGCGTTGGTGGCCACCCTGTAGAATCCGCAGGAGAAGTCGCCATTGGGGGACACTAGGATGGTGGTGGTGTCATCCTGGGTTGAAATGGATGAACGTCTAGCAATGAAGGCTTGGGTTGAAATGGATGAACGTCTAGCAAGGAAGGGTTTTCTATGATTTGCAAGAGCAATTGTTGGCATGAGAAGGAAGAATATTGTGGTGAAAATGTAGACGCCTCTCATGGCTATGACAACATAGAAAGCAATTGCCTATGATCATCTAACGCAAACGGGAACCAATGTGCTGTAGTCCATTATATATCTAGTTTCCAGTTGGGTCAAAAATAAAAGGCTCGCGAGCAAATTCGGTCAGCTTCACGACAACTTTGACGGGGCTCGTGTTACAACTTGATTGGGCTCGTGTTTGCTGTATAGTTCCTCCCTTTTTTTTTCTGGC]

[+] EMBL AK064542             [CCATGCATTTGACATACTCTAGAGAATGCCATCCAAGAAACTGAACAGTTGCCACTGGTCTCGTTTAGGCTGTACAGCCTAAGATTTCCATCGTAATCCAGTGTCAACCTCCTCATGACATGATCGCCAAGATCAGAGGCTTCAAACTTAAAAAGGTCACTTGATACAAAATAACCTGTCTGATTTAGAACACCATATCGAAGACTGTCATAAGTTGTCCTTCCATTCTTCCATGGCTGGTCAAAGGAAGGATTTGGCCAATATATGCTGGCAGTGTCTGGGCCGTTGTAGACGAGAGTCAAAATATTGTTACTGTCGAAGAGAAAGTTGTAGAAGCCTGAATATAGCAGCCCCCTGGCAGATGCATATACCAGCTTTACATTCCTAGTTATTGGCTGCAACGGCAGAAGTGTATCTGTTGGCGAGTCGAAGCTCCTCCATAGATGCTGGCCTTCAGGATCCATGACAACAAGGTTTCCATTGTTGAGAAGCTCTGCTCGGTCGGCTCGAGTGGCTGTTGTGTTGGTGCTCCATACAACTTTGCCATTGTAGTCAAGAAGGGCCAAGGTGCCGTCCTTCTGGAAGGTGAGCCTGGAACCCTTTCCGTTCACCGGAGCATCGCGGTTCGCCGTCCAAGCGACCGTCTTCTCCGACGACCTGGAGAACCAGATGGAGAAGGTGAATGCGTTGGTGGCCACCCTGTAGAATCCGCAGGAGAAGTCGCCATTGGGGGACACTAGGATGGTGGTGGTGTCATCCTGGGTTGAAATGGATGAACGTCTAGCAATGAAGGCTTGGGTTGAAATGGATGAACGTCTAGCAAGGAAGGGTTTTCTATGATTTGCAAGAGCAATTGTTGGCATGAGAAGGAAGAATATTGTGGTGAAAATGTAGACGCCTCTCATGGCTATGACAACATAGAAAGCAATTGCCTATGATCATCTAACGCAAACGGGAACCAATGTGCTGTAGTCCATTATATATCTAGTTTCCAGTTGGGTCAAAAATAAAAGGCTCGCGAGCAAATTCGGTCAGCTTCACGACAACTTTGACGGGGCTCGTGTTACAACTTGATTGGGCTCGTGTTTGCTGTATAGTTCCTCCCTTTTTTTTTCTGGC]


>consensus_7522#2 CCATGCATTTGACATACTCTAGAGAATGCCATCCAAGAAACTGAACAGTTGCCACTGGTC TCGTTTAGGCTGTACAGCCTAAGATTTCCATCGTAATCCAGTGTCAACCTCCTCATGACA TGATCGCCAAGATCAGAGGCTTCAAACTTAAAAAGGTCACTTGATACAAAATAACCTGTC TGATTTAGAACACCATATCGAAGACTGTCATAAGTTGTCCTTCCATTCTTCCATGGCTGG TCAAAGGAAGGATTTGGCCAATATATGCTGGCAGTGTCTGGGCCGTTGTAGACGAGAGTC AAAATATTGTTACTGTCGAAGAGAAAGTTGTAGAAGCCTGAATATAGCAGCCCCCTGGCA GATGCATATACCAGCTTTACATTCCTAGTTATTGGCTGCAACGGCAGAAGTGTATCTGTT GGCGAGTCGAAGCTCCTCCATAGATGCTGGCCTTCAGGATCCATGACAACAAGGTTTCCA TTGTTGAGAAGCTCTGCTCGGTCGGCTCGAGTGGCTGTTGTGTTGGTGCTCCATACAACT TTGCCATTGTAGTCAAGAAGGGCCAAGGTGCCGTCCTTCTGGAAGGTGAGCCTGGAACCC TTTCCGTTCACCGGAGCATCGCGGTTCGCCGTCCAAGCGACCGTCTTCTCCGACGACCTG GAGAACCAGATGGAGAAGGTGAATGCGTTGGTGGCCACCCTGTAGAATCCGCAGGAGAAG TCGCCATTGGGGGACACTAGGATGGTGGTGGTGTCATCCTGGGTTGAAATGGATGAACGT CTAGCAATGAAGGCTTGGGTTGAAATGGATGAACGTCTAGCAAGGAAGGGTTTTCTATGA TTTGCAAGAGCAATTGTTGGCATGAGAAGGAAGAATATTGTGGTGAAAATGTAGACGCCT CTCATGGCTATGACAACATAGAAAGCAATTGCCTATGATCATCTAACGCAAACGGGAACC AATGTGCTGTAGTCCATTATATATCTAGTTTCCAGTTGGGTCAAAAATAAAAGGCTCGCG AGCAAATTCGGTCAGCTTCACGACAACTTTGACGGGGCTCGTGTTACAACTTGATTGGGC TCGTGTTTGCTGTATAGTTCCTCCCTTTTTTTTTCTGGC



consensusID : consensus_7522#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 635
fasta sequence
                              [TTTTTTTTTTTGAATAATGTAAAGGCATACATTATATATTGGGGAAATAGATGCGCCTTATGCATATAGAACAAAGTATCTAAACAAATAGACTAATGGTTATGGTGAATATTACAATTTGATGGAATACAACAACTACTAAAATCACATTTGACATTTTACCTTAAATCTGGCGCCCATTGACTTGTCTTTTCAACACCATACCTTATTATTTTTCTCACAACACACATATCAGCTTAGATAGAGTTGTTGCAATAGCAAGGACATTATTCCACAAGAGAAAGCAGGATTTCAACCACACTGCTCATGCTCGGTCTTCTGCGCCTATCTTCTTCCACACATGACACTGCAATTTTTAGCACTGTTGCTGCCTGTGAATAGTTGAATTCTCCATTCATCCTGCAGTCAACAAAGTCCAGCAGCCATGATTGATCTTCGCTAGCTAATTTCTCTTTTAGAACATCAGCGGTGCGCTTAACAGCCATTTCCACCTCCTCTTCACCATCAACCACCCATCTGGAAACCCGATTCCCTTTTACTAACTCAAGAAGCACTACTCCATAGCTGTAAACATCAGCCTTGCCTGTGATCGGAAGATTTAGAGCCCATTCTGGCGCAATGTACCCCCCCTTGTC]

[+] EMBL CA762875             [TTTTTTTTTTTGAATAATGTAAAGGCATACATTATATATTGGGGAAATAGATGCGCCTTATGCATATAGAACAAAGTATCTAAACAAATAGACTAATGGTTATGGTGAATATTACAATTTGATGGAATACAACAACTACTAAAATCACATTTGACATTTTACCTTAAATCTGGCGCCCATTGACTTGTCTTTTCAACACCATACCTTATTATTTTTCTCACAACACACATATCAGCTTAGATAGAGTTGTTGCAATAGCAAGGACATTATTCCACAAGAGAAAGCAGGATTTCAACCACACTGCTCATGCTCGGTCTTCTGCGCCTATCTTCTTCCACACATGACACTGCAATTTTTAGCACTGTTGCTGCCTGTGAATAGTTGAATTCTCCATTCATCCTGCAGTCAACAAAGTCCAGCAGCCATGATTGATCTTCGCTAGCTAATTTCTCTTTTAGAACATCAGCGGTGCGCTTAACAGCCATTTCCACCTCCTCTTCACCATCAACCACCCATCTGGAAACCCGATTCCCTTTTACTAACTCAAGAAGCACTACTCCATAGCTGTAAACATCAGCCTTGCCTGTGATCGGAAGATTTAGAGCCCATTCTGGCGCAATGTACCCCCCCTTGTC]


>consensus_7522#3 TTTTTTTTTTTGAATAATGTAAAGGCATACATTATATATTGGGGAAATAGATGCGCCTTA TGCATATAGAACAAAGTATCTAAACAAATAGACTAATGGTTATGGTGAATATTACAATTT GATGGAATACAACAACTACTAAAATCACATTTGACATTTTACCTTAAATCTGGCGCCCAT TGACTTGTCTTTTCAACACCATACCTTATTATTTTTCTCACAACACACATATCAGCTTAG ATAGAGTTGTTGCAATAGCAAGGACATTATTCCACAAGAGAAAGCAGGATTTCAACCACA CTGCTCATGCTCGGTCTTCTGCGCCTATCTTCTTCCACACATGACACTGCAATTTTTAGC ACTGTTGCTGCCTGTGAATAGTTGAATTCTCCATTCATCCTGCAGTCAACAAAGTCCAGC AGCCATGATTGATCTTCGCTAGCTAATTTCTCTTTTAGAACATCAGCGGTGCGCTTAACA GCCATTTCCACCTCCTCTTCACCATCAACCACCCATCTGGAAACCCGATTCCCTTTTACT AACTCAAGAAGCACTACTCCATAGCTGTAAACATCAGCCTTGCCTGTGATCGGAAGATTT AGAGCCCATTCTGGCGCAATGTACCCCCCCTTGTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TTCCGGAGTTGGCGTCTCGGACGGCAAGGTTCGAGCTATCCTGTTGTTTTACAAAATGCC 60
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      CCCTGATTCATGTCTATACTCTATACCAATTCTCTTATTTTTGCAAAATAACCCCTACTA 120
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      GTTCTATCGGTCCTGCTATTTTGCAAAGTAGTCCTCCTCTCTTCCGCCTCGTCCCCGTCA 180
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      AACCCTTGCCGGCGGCGGCCGCCGGCCGGAGAGGCGGATGGCGTCGTCGATCTCCTGCGC 240
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      GCGGCCCTCGCCCGCCGCCGCTTCATCGCCTCTAGCTCCGGCAGCCTGACGTCACCGTCC 300
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      CTCCCCTCCTTGGATTGCAGCAGTAGGCTAACAAGATCATGAAACGAGCTCCCCCTCCAC 360
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      CCCACATTCCGGCGATCCCCCCCACCCTACCTGACCTAGGCCAATGAGAGTATCGTCCCC 420
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      GTGCCGTCGGTGAACGGCGGAGTAAGATTCGCCGGCGAGGTTAAGTATTGTTCCTGACTT 480
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TCTTCTTCCAAGGTGACAGCCTCGAGAAGGCTGTCCCCATTGAATCCATGTTACTGCTAC 540
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      CCAACAAATGTGGCTGGGTGATGAACAGAAACAGTGTTGGCGTTTTCTCGATTAAGATGA 600
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      GATCAGTGCGGGTTCAAGGTGTGAAAGCGGAGGATTTGAAGATGCAGTTATTCAGCTATT 660
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TTTTCCTTGCATGATCTTCTGATTCAGGCCCCACTTGGAACGCCGGGAATTTCTTTTTTC 720
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      AGTTCCAGTTAAATTCCTATTGTTAAAACGAGGCCTTCAGTATGCAATAGATTTGCTGGT 780
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TAGGATCCAACCTTTCACTCCAAGGAAAAAAATTATAAGCATATACTGGAAACAGAGGCA 840
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TTTTACCACTACATGTTTAATTAGAACTGGGTGTTCATACAAGTTGGTACGATTTTTACA 900
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      CGTAGGGATAAGAGAATGCTCTCGACAACATTTCTAAGGGCTCTTATTCAACTAGTTAAA 960
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      GCACATCACCTAGCTGGGAGCCATGAAAAATGTCACCTAGATAATTACAGTGCTGGCCAT 1020
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TATTCCACCAGTTAAAGCAGATTTTGAACCACTTGGCTCATGCTTGGTCTTTGGCTCCTC 1080
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TCCTCTTCCACGCATGAAACTGCTATCTTTAACATCTTGACTGCTTGTGAATAATTAAAC 1140
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TCTCCTTCCAGTCTGCCATCAACAAACTCCAAGAGCCATGACTGATCTTCGTTTACCAAT 1200
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TTCTCTTTGAGAATATCAGCAGTGCGTTTAACGCCCAGTTCCACCTTCTCACCCTCAACC 1260
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      ATCCATCTTGAAACCCGAATCCCCTTCACTAACTCAAGAAGCACAACTCCATAGCTGAAA 1320
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      ACATCAGCCTTGCCTGTGATCGGAAGATTTAGAACCCATTCTGGTGCAATGTACCCTCTA 1380
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      GTTCCATGCACTCTTGACAACATTAGTGCAGTTCCTTGCTTAAGTAGTTTGAGCCAGTCC 1440
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      AAAATCTGCAATCTTTGGCTCAAAGTCTTTATCTAACAATATGTTTTCTGGTTTGATATC 1500
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      GCAGTGTACGATCCATTCAAGACACTCATGGTGAAGATATGCCAGTCCTTTTGCTACGCC 1560
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      AATTGCAATATTGTACCGTTGGTTCCTTTTTAGCAAAGGAAATAAGTTCTGATGGTCAAA 1620
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      CACAAGTCTGTCTAAAGAACCATTCTCAATGTACTCAGAAACCAAGAGCCTACTTGTCTT 1680
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      CTCTGCACAGAACCCCCAAACTCTAACCAGATTCATATGATATATTCTTCCTATGACACT 1740
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TAGCTCAGACCTTAACTCCTGCTCTCCATAGATCACATCATTTAGCTTTTTCACTGCAAC 1800
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      CTGCCTTTCATCATCGAGGACTCCCTTGTAAACCACACCTGATCCACCATTCCCGCTCTT 1860
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      CCTGAAAACAATTGGTTGCCTTGTGTAACTCCTTGTAGCTGAATCTTCGGAATTGGCTAG 1920
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      AAATGATCATGTAACCTTCGTCAGTAATCTCTGATATTGTCTCCCATTTTTTAACAACTG 1980
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      AAAAGCCAGCAACAATTAAAACCACTTCAATCAAAAGCACTGTTAACAGAGAAGAAAGGA 2040
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      AGTAACCAAACATGAACTTGGATGGGACATCTTCGAGCATTTGTGATGAAGGGTAGGCTA 2100
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      -------------------GATATGGGATGGTTTAGAAGCCAATAGTTGTGAAGACGACG 41
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      ATTTTTCAGTAACTCCACAAGAATGGGTTAGTCTAGAATCTGATTCTTTGGTAAACGGCA 2160
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      CCTCCTTGGAAAATTTTAGATAAATATCATTGCTAGGATCTGGGAATTTCTTGCCATTGA 101
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      CCCCCTTAGGAACTTTCAGGTAGATGTCATTGTAAGGATCTGGGAAGCTCCTGCCATTGA 2220
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      TAAGCAAAGCCTTCGGGAAACATTCACCTTTTCCCTTCCGATATGCAAAAGCTTCGCAGC 161
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      AAAGCGTGTACTTTGGGTAACATAGGCCAGTTCTCCTTCGGTAACCGAAGGCTTGGCATT 2280
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      CATCATCGTTCAAGCAAATCTGTTTGCAGACTGGCAATGCGACAGATGGGGTGTAGTTGA 221
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TAGCGTTGGCCAGGCACATATTTCTACAGTTTGAGAACGGCACTGACTCTGCGTAGTCCA 2340
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      AGTCATACCCATAGAAGTCAGTCTTGGGGATCTCCACGAATATGAATTTTTGCTCTGTAT 281
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TGTCATATCCCCAGAAGTCAGTTCCAGTGTTCTTTCTGAATGAAAAGTCCCGGCTGATAG 2400
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      TGTTGTTTGCGTTA------------TGATCCCCTTTGACTGTGATGTTTTCCTTGTGCC 329
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TGTTGTTTGTATTTGTTCTATTCCCTTTATCCCAGATGACTGTCATGTCTGCCTTGCGCT 2460
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      TGCACCCTTGGCTCCAGTAACTAGGTTCAGTCATCTCGAAACCTTCGAGGCAGGAACACT 389
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      TGCACCCTTTGCTCCAGTCACTCGGATCAATCACCTCGAAGCCTTGGAGTCAAGAACAAT 2520
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      GAAGGCTTGGCATGTATGTGCAGAAGCTGTTTATGCCACACAGACCATGTATCTCACAGA 449
consensus_7522#2      --------------------------------------------CCATGCATTTGACATA 16
consensus_7522#0      GGAGTCTCGGGATGTAATTGCAGATGCTGTTTATACCACACACTCCATGCATTTGGCATA 2580
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      GTCGAGGGAATGCCAGCCAAGAGACTGACCATTTACCATTCGTTGCGTTTAAGCTATATA 509
consensus_7522#2      CTCTAGAGAATGCCATCCAAGAAACTGAACAGTTGCCACTGGTCTCGTTTAGGCTGTACA 76
consensus_7522#0      ATCTAGAGAATGCCATCCAAGAAACTGACCAGTTGCCACTGGTCTCGTTTAGGCTGTACA 2640
consensus_7522#3      ---------------------------------------TTTTTTTTTTTGAATAATGTA 21
                                                             *  *    ***      *  *

consensus_7522#1      GCCTTAGGTTACCATCATAATCGAGTGTCAACCTCCTCATGACATCCTAATCACCAAGAT 569
consensus_7522#2      GCCTAAGATTTCCATCGTAATCCAGTGTCAACCTCCTCATGACAT---GATCGCCAAGAT 133
consensus_7522#0      GCCTAAGATTTCCATCGTAATCCAGAGTCAACCTCCTCATGACAT---GATCGCCAAGAT 2697
consensus_7522#3      A----AGGCATACATTATA---TATTGGGGAAATAGATGCGCCTT---ATGCATATAGAA 71
                           **     ***  **    *  *   *  *      * * *      *    *** 

consensus_7522#1      CAGACGCTTCAAATTGA-AGCTTGTCACTAGCTAAGAACATGCCTTCCTGATTGAGAATC 628
consensus_7522#2      CAGAGGCTTCAAACTTA-AAAAGGTCACTTGATACAAAATAACCTGTCTGATTTAGAACA 192
consensus_7522#0      CAGAGTCTTCAAACTTA-AATAGGTCACTTGATACAAAACGACCTGTCTGATTTAGAACC 2756
consensus_7522#3      CAAAGTATCTAAACAAATAGACTAATGGTTATGGTGAATATTACAATTTGATGGAATACA 131
                      ** *   *  ***   * *         *       **     *    ****  *  *  

consensus_7522#1      CCATATTGGCTGCTGTTATAAGTAGTCCTACCATTCTCCCACGACCGCTCATA---AGGA 685
consensus_7522#2      CCATATCGAAGACTGTCATAAGTTGTCCTTCCATTCTTCCATGGCTGGTCAAAGGAAGGA 252
consensus_7522#0      CCATATCGGCGACTGTCATAAGTTGTCCTTCCATTCTTCCATGGCAGGTGAACCGAAGGA 2816
consensus_7522#3      ACAACTACTAAAATCACATTTGACATTTTACCTTAAATCTGGCGCCCATTG-ACTTGTCT 190
                       **  *       *   **  *   *  * ** *    *     *   *           

consensus_7522#1      TTAGGCCAATATATGCTGCTAGTCTTAGGGCCATTGTATATGATACTCAATATGTTGTTA 745
consensus_7522#2      TTTGGCCAATATATGCTGGCAGTGTCTGGGCCGTTGTAGACGAGAGTCAAAATATTGTTA 312
consensus_7522#0      TTTGGCCAATATATGCTGGCAGTGTCAGGGCCATTGTAGACGAGAGTCAAAATATTGTTA 2876
consensus_7522#3      TTTCAACACCATACCTTATTATTTTTCTCACAAC-ACACATATCAGCTTAGATAGAGTTG 249
                      **    **  ***   *   * * *     *      * *    *    * **   *** 

consensus_7522#1      CTGTCAAAGAAGAAGGTGTACAAGCCTGAGTAAGGCAAGCCCCTGGCAGA--TGCAGATA 803
consensus_7522#2      CTGTCGAAGAGAAAGTTGTAGAAGCCTGAATATAGCAGCCCCCTGGCAGA--TGCATATA 370
consensus_7522#0      CTGTCGAAGAGAAAGTTGTAGAAGCCTGAATATAACCAACCCCTGGCAGA--TGCAGATA 2934
consensus_7522#3      TTGCAATAGCAAGGACATTATTCCACAAGAGAAAGCAGGATTTCAACCACACTGCTCATG 309
                       **    **         **     *     *   *          *     ***  ** 

consensus_7522#1      CCAGCTTTGTATCTCGAGTCATCGGCTGCA-ATGGGAGGAGCGTGTCGGTCGGTGAATCG 862
consensus_7522#2      CCAGCTTTACATTCCTAGTTATTGGCTGCA-ACGGCAGAAGTGTATCTGTTGGCGAGTCG 429
consensus_7522#0      CCAGCTTTACATTCCTAGTTATTGGTTGCA-ACGGCAGAAGTGTGTCTGTTGGCGAGTCG 2993
consensus_7522#3      CTCGGTCTTCTGCGCCTATCTTCTTCCACACATGACACTGCAATTTTTAGCACTG--TTG 367
                      *  * * *      *   *  *      ** * *  *      * *        *  * *

consensus_7522#1      AAGCTCTTCCAGAGGCGATGACCGGCTGGATCCATGA--CGACGAGGTT--GCCGCTGTC 918
consensus_7522#2      AAGCTCCTCCATAGATGCTGGCCTTCAGGATCCATGA--CAACAAGGTT--TCCATTGTT 485
consensus_7522#0      AAGCTCCTCCATAGATGCTGGCCTTGTAGGTCCATGA--CCACAAGGTT--TCCATTGTT 3049
consensus_7522#3      CTGCCTGTGAATAGTTGAATTCTCCATTCATCCTGCAGTCAACAAAGTCCAGCAGCCATG 427
                        **   *  * **  *    *        ***   *  * ** * **    *     * 

consensus_7522#1      GTCAAGCTCTGCACGGCTAGCGCCAGTGGCCGTGGTGTTGGTGCTCCACACAACCGTGCC 978
consensus_7522#2      GAGAAGCTCTGCTCGGTCGGCTCGAGTGGCTGTTGTGTTGGTGCTCCATACAACTTTGCC 545
consensus_7522#0      GAGAAGCTCTGCTCGATTTGCTTGAGTGGCTGTTGTGTTGGTGCTCCATACAACTTTGCC 3109
consensus_7522#3      ATTGATCTTCGCTAGCTAATTTCTCTT--TTAGAACATCAGCGGTGCGCTTAAC--AGCC 483
                          * **  **  *           *          *  * * * *    ***   ***

consensus_7522#1      GTTGTAATCAACAAGGGCCAGGCTCCCGTCCTTCCGGAAGGTGAGCTTGGAGCCCTTGCC 1038
consensus_7522#2      ATTGTAGTCAAGAAGGGCCAAGGTGCCGTCCTTCTGGAAGGTGAGCCTGGAACCCTTTCC 605
consensus_7522#0      ATTGTAGTCAAGAAGGGCCAAGGTCCCGTCGTTCTGGAAGGTGAGCCTGGAGCCCTTGCC 3169
consensus_7522#3      ATTTCCACCTCCTCTTCACCATCAACCACCCATCTGGAAA------CCCGATTCCCTTTT 537
                       **     *         *      **  *  ** ****          **  ** *   

consensus_7522#1      GTTCACCGGAGCGTCGCGGTTCGCCGTCC--ACGCGACGGTCTTCTCCGACGACCTGGAG 1096
consensus_7522#2      GTTCACCGGAGCATCGCGGTTCGCCGTCC--AAGCGACCGTCTTCTCCGACGACCTGGAG 663
consensus_7522#0      ATTCACCGGAGCATCGCGGTTCGCCGTCC--AAGCGACAGTCTTCTCTGACGACCTGGAA 3227
consensus_7522#3      ACTAACTCAAGAAGCACTACTCCATAGCTGTAAACATCAGCCTTGCCTG-TGATCGGAAG 596
                        * **   **   * *   **     *   *  *  * * ***  * *  ** * * * 

consensus_7522#1      AACCAGATGGAGAAGGTGAAGGCGTTGGTGGCCACCTTGTAGAAGCCACATGAGAAGTGG 1156
consensus_7522#2      AACCAGATGGAGAAGGTGAATGCGTTGGTGGCCACCCTGTAGAATCCGCAGGAGAAGTCG 723
consensus_7522#0      AACCAGATGGAGAAGGTGAAGGCGTTGGTGGCCACCTTGTAGAAGCCACAGGAGAAATCG 3287
consensus_7522#3      ATTTAGA--GCCCATTCTGGCGCAATGTACCCCCCCTTGTC------------------- 635
                      *   ***  *   *       **  **    ** ** ***                    

consensus_7522#1      CCATTGGGGGACACAAGGATGGTGGTGGTGTCATC------------------------- 1191
consensus_7522#2      CCATTGGGGGACACTAGGATGGTGGTGGTGTCATCCTGGGTTGAAATGGATGAACGTCTA 783
consensus_7522#0      TCATTGGGGGACACTAGGATGGCGGTGGTGTCATC------------------------- 3322
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      -----------TTGGGTGGAGATTGAGGAACCCCTTGCAAGGGAGCTTCTCTGATCTTCT 1240
consensus_7522#2      GCAATGAAGGCTTGGGTTGAAATGGATGAACGTCTAGCAAGGAAGGGTTTTCTATGATTT 843
consensus_7522#0      -----------CTGGGTTGAAATGGATGAACGCCTAGTAAGAAAGCTCTTTTGATCTTTT 3371
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      GCAAGAGCAATGGTGAGCGCGAGAAGGAAGGAGATCGATGTGGTGAAAATGCTGACGCCT 1300
consensus_7522#2      GCAAGAGCAATTGTTGGCATGAGAAGGAAGAATAT---TGTGGTGAAAATGTAGACGCCT 900
consensus_7522#0      GCAACAGCAGTGGGGAGCATGAGAAGGAAGGATATCACTGTGGTGAAAATGCAGAAGCCT 3431
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      CTCATGGCCACGGCAA--------GCAACTGCTTTC---CATGGAATGCAAG-GGAAACT 1348
consensus_7522#2      CTCATGGCTATGACAACATAGAAAGCAATTGCCTATGATCATCTAACGCAAACGGGAACC 960
consensus_7522#0      CTCACGGCGACGTTTTGCTACGGCATGCATGAACTTAAACATGAATGATGAAAGCGAGCA 3491
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      GGTACA-TATGTTATTAT--ATGTATCAAGATTG----TGCCCATTATTACTGTGACAAC 1401
consensus_7522#2      AATGTGCTGTAGTCCATT--ATATATCTAGTTT-------CCAGTTGGGTCAAAAATAAA 1011
consensus_7522#0      AACGGCCAGTCGTTGATTCAGCATGTCCAGGACGGCGTTGCCGAGTACCACATGCCTGCT 3551
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      TTGTCGTAGATCGTGTACACTAATCCTGTTGCTACAGCCTAATATTCCCTTCGTCCCAAA 1461
consensus_7522#2      AGGCTCGCGAGCAAATTCGGTCAGCTTCACGACA-ACTTTGACGGGGCTCGTGTTACAAC 1070
consensus_7522#0      TGGCTCCGTTGCTGTCTGATTCCCCCAGGTGTCTGGTGACAAACAGAACGTTGTATTGGA 3611
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ATAAATTCATTTGTGGGT------------------------------------------ 1479
consensus_7522#2      TTGATTGGGCTCGTGTTTGCTGTATAGTTCCTCCCTTTTTTTTTCTGGC----------- 1119
consensus_7522#0      CAGGGTTATGGCATTCAAACCAGAATATTTGACTGGTAATTTCTATGTAATATGTTAGGA 3671
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ------------------------------------------------------------
consensus_7522#2      ------------------------------------------------------------
consensus_7522#0      ATATTTATAGAACCGTTATACTTATGATAGATAAGTATTATGAAAGTGATGTCTGAGAAA 3731
consensus_7522#3      ------------------------------------------------------------
                                                                                  

consensus_7522#1      ---------------
consensus_7522#2      ---------------
consensus_7522#0      TATACTGGGATAATT 3746
consensus_7522#3      ---------------
                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)