These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7529#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2666 fasta sequence [TTTCTCTCCTCCTATGTGCCACCACCTCCTCACACATTCCCACGCACACATTTCCCCATGCACATCTCCCTCAATCTCTCTCTCTCTCTGCATAGATGCTGCTACTCCTACTTGCTAGCCCTACTACTCCCTACCACACGGCCACACACACAGCAAGCAGAGCAGACGGCTTCGCTTTGCATGGCCACTGGAGTTGTTGCTGTTCTTCTTCCCTTTGAGCAGCAGCAGCAGTGAGCCGTCCTGTGGTGTGTTGGTTGTCACAGTACTGTGTGGTAGTGGTGGAAGTGGAGGAGCAAACCTTGGACATGAATTGAGAGGCCCCTATCTTTTCCTGTCCATCTCTCAGTAGCAGTGAGCTGAGTGAGTGAGTGAGTGACAGTGAGTGATGGATTGATGTGTGATGCCTCACTAGCTGAGCCCCCCCCTCC-TCCTCCTCCTTCCTTTGTGGCAAATCTCATCAGCAACAGGGACCTCTTGGTGTGACTACTTTGTTTACACGGTGGTTCTCTCCTTTTCTTC-TTCTCAGCGTCGCCGTCGTC-TTCTTTC-TCCTTCATTCATTCAGACTTCATCAGAGT-AGTAGTAGTAGGAAGGAGATAGTGTAGACAAGAAGTGTGTGTGTGTGTGTGAGAGAGAGGTAGAGAGATGGAGAGGAGGAGGAAGGCAATGTGGCTGTATCCAAAGGTGGTGGGCTTCAACCCTCCGGAGAGATGGGGGCACTCCGCTTGCTTCTTCGAGGGCGTCGTCTACGTCTTTGGGGGGTGCTGCGGCGGGCTGCATTTCAACGACGTGCTGACGCTGAACCTGGAGACGATGGCGTGGAGCTCGCTGGCGACGACAGGGGCGCGGCCGGGGACGCGCGACAGCCACGGCGCGGCGCTGGTCGGCCACCGGATGATGGTGTTCGGCGGCACCAACGGGTCCAAGAAGGTGAACGACCTCCACGTGC-TCGACCTCCGGACCAAGGAGTGGACCAAGCCGCCGTGCAAGGGCACGCCGCCGTCGCCGCGTGAGAGCCACACGGTGACTGCGTGCGGCGGCTGCGACCGGCTGGTGGTGTTCGGCGGCAGCGGCGAGGGGGAGGGGAACTACCTCAACGACGTGCACGTCCTGGACGTGGCCACCATGACGTGGTCGTCGCCGGAGGTGAAGGGCGACGTCGTGCCCGCGCCGAGGGACAGCCACGGCGCCGTCGCTGTGGGCAGCCGGCTGGTCGTCTACGGCGGCGACTGCGGCGACCGGTACCACGGCGAGGTGGACGTGCTCGACATGGACGCCATGGCGTGGTCAAGGTTTGCAGTAAAAGGGGCCTCACCTGGTGTTCGAGCTGGCCACGCTGCTGTAGGTGTTGGATCTAAGGTCTATGTTATTGGAGGAGTTGGTGATAAGCAATACTACAGTGATGCCTGGATTCTTGATGTTGCAAATCGGTCGTGGACACAGCTTGAGATATGTGGGCAGCAACCGCAAGGACGGTTTTCTCATAGCGCGGTTGTCCTGAATACCGATATCGCAATTTACGGAGGGTGTGGTGAAGATGAACGGCCCCTGAATGAGCTGCTCATTCTTCAGTTGGGCTCTGAGCATCCAAATGGCCGTTACAACATCTCAATGTGCAAAGTTCTAAGCAACCACTGGAGCCAGGAGAGGCGAAAATTCTTGAGAACAGAAAATCAAAGAGATCCAAACATGAGTAATGGAGAACTTGGTCCAAGATCTCGGGAAGCAGAAATCGAACAAAGAAACCCGTTCTTGCGTGGTCTCGAGAATGGCCATGTGAAAAGGAGGAGAACTGGCGATGTTCGACTGAAAGAGACCGAGTCGGAGCAGGAGGAGCACTCACTATCACTTTCTCAGCACTCTTCACCATCCCAATCTGATCAGGAGCAGAATGGAGCTCAGAAGCTTTCGGCATCTCCTAACGGATCAATCTCAGCCCTGCAACCGTTTGTTCACCTCAACACCAATGGCACTCTGAGGGCTGCTGGAGGTGTGTCACCGAGGACCCTGAAGACGGATCAGTTCCTCCGCACCATTGCTCCGCAGCAGCGGCATGAAGTGCAGTTCCTAGCAGCTGAACCCAAGCTGCACCACCGCCCGCCTACTCCACCCCTTATCGGCGCAGAGGTTCATGGGACTATCGATGGAGCTTTCGATTCAGGGTACCTCATGACCGCTGTCGTGAATGGACAGCTCTTCAGAGGCGTCCTTTTCGCTCCTGGTCCGGGAGTAACGGCTCCGAGACCGACGTTGCACCATCCGATTCTGATGAGCTCGGCCATTCCCCCGCAGCAGCAGCAGCAGCGCCCGGTGCTCGCCCACGCCATCCCGGTTCATGCCCGGCCCGTGCCACAGGCGACGGGCTTCGTGCTGCCGGACTGCAGCAACCATGCCCGGCAAGCATTCCCGGCGTCTGCAGCGGCGGCAGCGGCGAAGATCATCAAGTCTGAACCGGAGAGGGGCGGCAGTGACCTGCACGATGTTGTGCTCACGCTGGGAGGGCCTGGAGCTGGCAAGTGACACCTCTTTTCTTGTTTTAACACTTGTGATCTTGGCCTCTGATGTTGATCTGTTAATCTGCTCTTGTAAAATAGTCATCCTGGTTGACAAAAATAAGACCAGTAACCTTGTGTAATTGTTCCTGATAATGCCCAATTTTCTTCTTCCTG] [+] EMBL AK101262 [TTTCTCTCCTCCTATGTGCCACCACCTCCTCACACATTCCCACGCACACATTTCCCCATGCACATCTCCCTCAATCTCTCTCTCTCTCTGCATAGATGCTGCTACTCCTACTTGCTAGCCCTACTACTCCCTACCACACGGCCACACACACAGCAAGCAGAGCAGACGGCTTCGCTTTGCATGGCCACTGGAGTTGTTGCTGTTCTTCTTCCCTTTGAGCAGCAGCAGCAGTGAGCCGTCCTGTGGTGTGTTGGTTGTCACAGTACTGTGTGGTAGTGGTGGAAGTGGAGGAGCAAACCTTGGACATGAATTGAGAGGCCCCTATCTTTTCCTGTCCATCTCTCAGTAGCAGTGAGCTGAGTGAGTGAGTGAGTGACAGTGAGTGATGGATTGATGTGTGATGCCTCACTAGCTGAGCCCCCCCCTCC TCCTCCTCCTTCCTTTGTGGCAAATCTCATCAGCAACAGGGACCTCTTGGTGTGACTACTTTGTTTACACGGTGGTTCTCTCCTTTTCTTC TTCTCAGCGTCGCCGTCGTC TTCTTTC TCCTTCATTCATTCAGACTTCATCAGAGT AGTAGTAGTAGGAAGGAGATAGTGTAGACAAGAAGTGTGTGTGTGTGTGTGAGAGAGAGGTAGAGAGATGGAGAGGAGGAGGAAGGCAATGTGGCTGTATCCAAAGGTGGTGGGCTTCAACCCTCCGGAGAGATGGGGGCACTCCGCTTGCTTCTTCGAGGGCGTCGTCTACGTCTTTGGGGGGTGCTGCGGCGGGCTGCATTTCAACGACGTGCTGACGCTGAACCTGGAGACGATGGCGTGGAGCTCGCTGGCGACGACAGGGGCGCGGCCGGGGACGCGCGACAGCCACGGCGCGGCGCTGGTCGGCCACCGGATGATGGTGTTCGGCGGCACCAACGGGTCCAAGAAGGTGAACGACCTCCACGTGC TCGACCTCCGGACCAAGGAGTGGACCAAGCCGCCGTGCAAGGGCACGCCGCCGTCGCCGCGTGAGAGCCACACGGTGACTGCGTGCGGCGGCTGCGACCGGCTGGTGGTGTTCGGCGGCAGCGGCGAGGGGGAGGGGAACTACCTCAACGACGTGCACGTCCTGGACGTGGCCACCATGACGTGGTCGTCGCCGGAGGTGAAGGGCGACGTCGTGCCCGCGCCGAGGGACAGCCACGGCGCCGTCGCTGTGGGCAGCCGGCTGGTCGTCTACGGCGGCGACTGCGGCGACCGGTACCACGGCGAGGTGGACGTGCTCGACATGGACGCCATGGCGTGGTCAAGGTTTGCAGTAAAAGGGGCCTCACCTGGTGTTCGAGCTGGCCACGCTGCTGTAGGTGTTGGATCTAAGGTCTATGTTATTGGAGGAGTTGGTGATAAGCAATACTACAGTGATGCCTGGATTCTTGATGTTGCAAATCGGTCGTGGACACAGCTTGAGATATGTGGGCAGCAACCGCAAGGACGGTTTTCTCATAGCGCGGTTGTCCTGAATACCGATATCGCAATTTACGGAGGGTGTGGTGAAGATGAACGGCCCCTGAATGAGCTGCTCATTCTTCAGTTGGGCTCTGAGCATCCAAATGGCCGTTACAACATCTCAATGTGCAAAGTTCTAAGCAACCACTGGAGCCAGGAGAGGCGAAAATTCTTGAGAACAGAAAATCAAAGAGATCCAAACATGAGTAATGGAGAACTTGGTCCAAGATCTCGGGAAGCAGAAATCGAACAAAGAAACCCGTTCTTGCGTGGTCTCGAGAATGGCCATGTGAAAAGGAGGAGAACTGGCGATGTTCGACTGAAAGAGACCGAGTCGGAGCAGGAGGAGCACTCACTATCACTTTCTCAGCACTCTTCACCATCCCAATCTGATCAGGAGCAGAATGGAGCTCAGAAGCTTTCGGCATCTCCTAACGGATCAATCTCAGCCCTGCAACCGTTTGTTCACCTCAACACCAATGGCACTCTGAGGGCTGCTGGAGGTGTGTCACCGAGGACCCTGAAGACGGATCAGTTCCTCCGCACCATTGCTCCGCAGCAGCGGCATGAAGTGCAGTTCCTAGCAGCTGAACCCAAGCTGCACCACCGCCCGCCTACTCCACCCCTTATCGGCGCAGAGGTTCATGGGACTATCGATGGAGCTTTCGATTCAGGGTACCTCATGACCGCTGTCGTGAATGGACAGCTCTTCAGAGGCGTCCTTTTCGCTCCTGGTCCGGGAGTAACGGCTCCGAGACCGACGTTGCACCATCCGATTCTGATGAGCTCGGCCATTCCCCCGCAGCAGCAGCAGCAGCGCCCGGTGCTCGCCCACGCCATCCCGGTTCATGCCCGGCCCGTGCCACAGGCGACGGGCTTCGTGCTGCCGGACTGCAGCAACCATGCCCGGCAAGCATTCCCGGCGTCTGCAGCGGCGGCAGCGGCGAAGATCATCAAGTCTGAACCGGAGAGGGGCGGCAGTGACCTGCACGATGTTGTGCTCACGCTGGGAGGGCCTGGAGCTGGCAAGTGACACCTCTTTTCTTGTTTTAACACTTGTGATCTTGGCCTCTGATGTTGATCTGTTAATCTGCTCTTGTAAAATAGTCATCCTGGTTGACAAAAATAAGACCAGTAACCTTGTGTAATTGTTCCTGATAATGCCCAATTTT ] [+] EMBL AU062862 [ CCCTTTGAGCAGCAGCAGCAGTNAGCCGTCCTGTGGTGTGTTGGTTGTCACAGTACTGTGTGGTGGTGGTGGAAGTGGAGGAGCAAACCTTGGACATGAATTGAGAGGCCCCTATCTTTTCCANTCCATCTCTCAGTAGCAGTGAGCTGAGTGAGTGAGTNAGTANCAGTGAGTGATGGATTGATGTGTGATGCCTCACTAGCTGAGCCCCCCCCTCCTTNCTCCTCCTTCCTTTGTGGCAAATCTCATCAGCAACAGGGACCTCTTNGTGTGACTACTTTGTTTACACGGTGGTTCTCTCCTTTNCTNCTTTCTCAGCGTCGCCGTCGTCTTTCTTTCTTCCTGCATTCATTCAGACTTCATCAGAGTAAGTAGgta ] [+] EMBL C72594 [ AGACAAGAAGTGTGTGTGTGTGTGTGAGAGAGAGGTAGAGAGATGGAGAGGAGGAGGAAGGCAATGTGGCTGTATCCAAAGGTGGTGGGCTTCAACCCTCCGGAGAGATGGGGGCACTCCGCTTGCTTCTTCGAGGGCGTCGTCTACGTCTTTGGGGGGTGCTGCGGCGGGCTGCATTTCAGCGACGTGCTGACGCTGAACCTGGAGACGATGGCGTGGAGCTCGCTGGCGACGACAGGGGCGCGGCCGNGGACGCGCGACA CCACGGCGCGGCGCTGGTCGGCCACCGGATGATGGTGTTCGGCGGCACCAACGGGTCCAAGAAGGTGAACGACCTCCACGTGCTTCGACCTCCGGACCAAGGAGTTGACC ] [+] EMBL AK119559 [ CAACGACGTGCACGTCCTGGACGTGGCCACCATGACGTGGTCGTCGCCGGAGGTGAAGGGCGACGTCGTGCCCGCGCCGAGGGACAGCCACGGCGCCGTCGCTGTGGGCAGCCGGCTGGTCGTCTACGGCGGCGACTGCGGCGACCGGTACCACGGCGAGGTGGACGTGCTCGACATGGACGCCATGGCGTGGTCAAGGTTTGCAGTAAAAGGGGCCTCACCTGGTGTTCGAGCTGGCCACGCTGCTGTAGGTGTTGGATCTAAGGTCTATGTTATTGGAGGAGTTGGTGATAAGCAATACTACAGTGATGCCTGGATTCTTGATGTTGCAAATCGGTCGTGGACACAGCTTGAGATATGTGGGCAGCAACCGCAAGGACGGTTTTCTCATAGCGCGGTTGTCCTGAATACCGATATCGCAATTTACGGAGGGTGTGGTGAAGATGAACGGCCCCTGAATGAGCTGCTCATTCTTCAGTTGGGCTCTGAGCATCCAAATGGCCGTTACAACATCTCAATGTGCAAAGTTCTAAGCAACCACTGGAGCCAGGAGAGGCGAAAATTCTTGAGAACAGAAAATCAAAGAGATCCAAACATGAGTAATGGAGAACTTGGTCCAAGATCTCGGGAAGCAGAAATCGAACAAAGAAACCCGTTCTTGCGTGGTCTCGAGAATGGCCATGTGAAAAGGAGGAGAACTGGCGATGTTCGACTGAAAGAGACCGAGTCGGAGCAGGAGGAGCACTCACTATCACTTTCTCAGCACTCTTCACCATCCCAATCTGATCAGGAGCAGAATGGAGCTCAGAAGCTTTCGGCATCTCCTAACGGATCAATCTCAGCCCGGCAACCGTTTGTTCACCTCAACACCAATGGCACTCTGAGGGCTGCTGGAGGTGTGTCACCGAGGACCCTGAAGACGGATCAGTTCCTCCGCACCATTGCTCCGCAGCAGCGGCATGAAGTGCAGTTCCTAGCAGCTGAACCCAAGCTGCACCACCGCCCGCCTACTCCACCCCTTATCGGCGCAGAGGTTCATGGGACTATCGATGGAGCTTTCGATTCAGGGTACCTCATGACCGCTGTCGTGAATGGACAGCTCTTCAGAGGCGTCCTTTTCGCTCCTGGTCCGGGAGTAACGGCTCCGAGACCGACGTTGCACCATCCGATTCTGATGAGCTCGGCCATTCCCCCGCAGCAGCAGCAGCAGCGCCCGGTGCTCGCCCACGCCATCCCGGTTCATGCCCGGCCCGTGCCACAGGCGACGGGCTTCGTGCTGCCGGACTGCAGCAACCATGCCCGGCAAGCATTCCCGGCGTCTGCAGCGGCGGCAGCGGCGAAGATCATCAAGTCTGAACCGGAGAGGGGCGGCAGTGACCTGCACGATGTTGTGCTCACGCTGGGAGGGCCTGGAGCTGGCAAGTGACACCTCTTTTCTTGTTTTAACACTTGTGATCTTGGCCTCTGATGTTGATCTGTTAATCTGCTCTTGTAAAATAGTCATCCTGGTTGACAAAAATAAGACCAGTAACCTTGTGTAATTGTTCCTGATAATGCCCAATTTTCTTCTTCCTG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||