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Oryza sativa
cluster # 7534 cluster # 7534       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7534#0 length = 2008 sequences # 4  

consensusID : consensus_7534#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2008
fasta sequence
                              [AAGCCCATGGCTCTACTCCGAGCAGCCGCCGCCGCCGACCTCCTCCGCCGCCACCGCCGCGCCCCGCTCCCACTCTTACTCTCCGCTCTCTCGCCGCCTCCACCGACCACCCCGGAATCCTGCCCCGACGGCCCCAGTCCCGTCGCCCCATACTTCGCTCCGCCTCCGCCTCCGCTATGCCGCCGCCGTCGGAGCTGGCCGCCTCCGCCTCCGCCTCCGCGCGTCTCGTCTTCCTCCTACGTCGGCAGGGGGATCCTGCTCCCCGCGACCTTCTCGATCTACTCTCCCCTCTCTACCTCCTCCTCCGCCTCCCCCGACGGCTCCCCGGATGAGGATTCCTCGCCGCCGCACCCGTCTCCCGCGGCGGCGCCTCCGTCCTCGTGGGTTGACAGGTGGCTCCCACAGGCGGCGCGCCCCTACGCCATGCTTGCCCGCCTCGACAAGCCCATCGGCACCTGGCTCCTCGCGTGGCCCTGCTTCTGGTCAATCTCAATGGCGGCGATGCCGGGGGAGCTGCCTGACATGAGAATGCTGGCACTCTTCGGATGTGGAGCCGTCCTCCTCAGAGGCGCTGGATGCACGGTCAATGATCTTCTTGATCGAGACATTGATAACAAGGTTGAGCGCACCAAAAGCAGGCCTTTTGCATCAGGCATTCTAACCCCTACACAAGGAGTGGGCTTCCTTGGATTGCAGCTTTTACTGGGATTGGGCATTCTTCTCCAACTAAATAACTATAGCCGTATTCTTGGGGCATCTTCAC-TTTTTTTGGTCTTCTCTTATCCCTTGATGAAGAGATTCACATTTTGGCCTCAGGCGTATCTTGGCTTGACCTTTAATTGGGGAGCTTTGTTAGGATGGGCTGCCATTAAAGAAAGCTTAGATCCTGCCATCATCCTCCCATTGTATACCGCTGGTATATGCTGGACACTCGTATATGATACCATATATGCACATCAGGACAAAGAAGATGACCTCAAAGTAGGGGTCAAGTCCACAGCATTAAGGTTTGGAGATTTAACAAAACACTGGATTAGTGGCTTCGGTGTTGCATGCATTGGCAGCTTAGCACTCAGTGGCTACAGTGCTGACCTTGCATGGCCTTACTATCCTTTTCTAGCTGCTGCATCTGCGCAGTTAGCATGGCAGATTTCAACTGTTGATTTATCTGACCGCCTGGATTGCAACAGGAAATTTGTGTCCAATAAGTGGTTTGGCGCTTTGATATTTGGTGGAGTTTTATGTGGACGACTTGTATCATGATAATTATGAGCCACGAGTTTATTATGGTTCATGGTAGTGTTTTCAGTGGAAAATTCGTAATTTTGATAGAATAGAAAGACTCTTGACAAAACTTAGGATGCGCAAACCTCCAAAGAATGGAAAGTTGATTCAAAAAGAAAGAAAGAAAGAATGGGAGTTAGGGCTTGGGTTTCCTCTGTGGCGCGCTAGTTCCAATTTCATATCATGCAGTGCAGTCTCATTTCTATTTTTATTGGATGAAAGCCCTTATCCATGTTGAGGACTGCTATGCCCTGCTTTATGCATCAAGTTGCAGAATGAACTTTTGTTATTTCCTGAGCACTTTGTGACAATGTTCCCCATCTTCTGTTCAAAAGATAAACCAGGGAACATGATAAAATATTGATGCAGATTGTTGTGCATTTACAAGACTCTTCTGAATTCTGATGCTCCTTATTCATGACAAGGCTAATTAATTCAGTCTAACACCAAACATATTTTTACGGGACTAAGATGTAAATTGTGCCATACA-TTTTTTCCCATGGATAGCAGTTGGACAGAACTATCATAATGTATTTACCGGTTATACCGATTAGTTCATTTTGTTACCACGATCTTGTTACCATGTTCGATGTGTCCCTTGCAGTCTTGTAGAGTTCTCTTGCACATTCTCTGTTTGATATGATGTTGATTTTTTAGAGAGAGAAAGATGTTGATTCAGTTGTTAGACTTGTTCTATGAGAACATGATCAGTATATGAGGTATT]

[+] EMBL AK119582             [AAGCCCATGGCTCTACTCCGAGCAGCCGCCGCCGCCGACCTCCTCCGCCGCCACCGCCGCGCCCCGCTCCCACTCTTACTCTCCGCTCTCTCGCCGCCTCCACCGACCACCCCGGAATCCTGCCCCGACGGCCCCAGTCCCGTCGCCCCATACTTCGCTCCGCCTCCGCCTCCGCTATGCCGCCGCCGTCGGAGCTGGCCGCCTCCGCCTCCGCCTCCGCGCGTCTCGTCTTCCTCCTACGTCGGCAGGGGGATCCTGCTCCCCGCGACCTTCTCGATCTACTCTCCCCTCTCTACCTCCTCCTCCGCCTCCCCCGACGGCTCCCCGGATGAGGATTCCTCGCCGCCGCACCCGTCTCCCGCGGCGGCGCCTCCGTCCTCGTGGGTTGACAGGTGGCTCCCACAGGCGGCGCGCCCCTACGCCATGCTTGCCCGCCTCGACAAGCCCATCGGCACCTGGCTCCTCGCGTGGCCCTGCTTCTGGTCAATCTCAATGGCGGCGATGCCGGGGGGGCTGCCTGACATGAGAATGCTGGCACTCTTCGGATGTGGAGCCGTCCTCCTCAGAGGCGCTGGATGCACGGTCAATGATCTTCTTGATCGAGACATTGATAACAAGGTTGAGCGCACCAAAAGCAGGCCTTTTGCATCAGGCATTCTAACCCCTACACAAGGAGTGGGCTTCCTTGGATTGCAGCTTTTACTGGGATTGGGCATTCTTCTCCAACTAAATAACTATAGCCGTATTCTTGGGGCATCTTCAC TTTTTTTGGTCTTCTCTTATCCCTTGATGAAGAGATTCACATTTTGGCCTCAGGCGTATCTTGGCTTGACCTTTAATTGGGGAGCTTTGTTAGGATGGGCTGCCATTAAAGAAAGCTTAGATCCTGCCATCATCCTCCCATTGTATACCGCTGGTATATGCTGGACACTCGTATATGATACCATATATGCACATCAGGACAAAGAAGATGACCTCAAAGTAGGGGTCAAGTCCACAGCATTAAGGTTTGGAGATTTAACAAAACACTGGATTAGTGGCTTCGGTGTTGCATGCATTGGCAGCTTAGCACTCAGTGGCTACAGTGCTGACCTTGCATGGCCTTACTATCCTTTTCTAGCTGCTGCATCTGCGCAGTTAGCATGGCAGATTTCAACTGTTGATTTATCCGACCGCCTGGATTGCAACAGGAAATTTGTGTCCAATAAGTGGTTTGGCGCTTTGATATTTGGTGGAGTTTTATGTGGACGACTTGTATCATGATAATTATGAGCCACGAGTTTATTATGGTTCATGGTAGTGTTTTCAGTGGAAAATTCGTAATTTTGATAGAATAGAAAGACTCTTGACAAAACTTAGGATGCGCAAACCTCCAAAGAATGGAAAGTTGATTCAAAAAGAAAGAAAGAAAGAATGGGAGTTAGGGCTTGGGTTTCCTCTGTGGCGCGCTAGTTCCAATTTCATATCATGCAGTGCAGTCTCATTTCTATTTTTATTGGATGAAAGCCCTTATCCATGTTGAGGACTGCTATGCCCTGCTTTATGCATCAAGTTGCAGAATGAACTTTTGTTATTTCCTGAGCACTTTGTGACAATGTTCCCCATCTTCTGTTCAAAAGATAAACCAGGGAACATGATAAAATATTGATGCAGATTGTTGTGCATTTACAAGACTCTTCTGAATTCTGATGCTCCTTATTCATGACAAGGCTAATTAATTCAGTCTAACACCAAACATATTTTTACGGGACTAAGATGTAAATTGTGCCATACA TTTTTTCCCATGGATAGCAGTTGGACAGAACTATCATAATGTATTTACCGGTTATACCGATTAGTTCATTTTGTTACCACGATCTTGTTACCATGTTCGATGTGTCCCTTGCAGTCTTGTAGAGTTCTCTTGCACATTCTCTGTTTGATATGATGTTGATTTTTTAGAGAGAGAAAGATGTTGATTCAGTTGTTAGACTTGTTCTATGAGAACATGATCAGTATATGAG     ]
[+] EMBL AK069839             [                                                                                                                                                                                                                                    TCTTCCTCCTACGTCGGCAGGGGGATCCTGCTCCCCGCGACCTTCTCGATCTACTCTCCCCTCTCTACCTCCTCCTCCGCCTCCCCCGACGGCTCCCCGGATGAGGATTCCTCGCCGCCGCACCCGTCTCCCGCGGCGGCGCCTCCGTCCTCGTGGGTTGACAGGTGGCTCCCACAGGCGGCGCGCCCCTACGCCATGCTTGCCCGCCTCGACAAGCCCATCGGCACCTGGCTCCTCGCGTGGCCCTGCTTCTGGTCAATCTCAATGGCGGCGATGCCGGGGGAGCTGCCTGACATGAGAATGCTGGCACTCTTCGGATGTGGAGCCGTCCTCCTCAGAGGCGCTGGATGCACGGTCAATGATCTTCTTGATCGAGACATTGATAACAAGGTTGAGCGCACCAAAAGCAGGCCTTTTGCATCAGGCATTCTAACCCCTACACAAGGAGTGGGCTTCCTTGGATTGCAGCTTTTACTGGGATTGGGCATTCTTCTCCAACTAAATAACTATAGCCGTATTCTTGGGGCATCTTCACTTTTTTTTGGTCTTCTCTTATCCCTTGATGAAGAGATTCACATTTTGGCCTCAGGCGTATCTTGGCTTGACCTTTAATTGGGGAGCTTTGTTAGGATGGGCTGCCATTAAAGAAAGCTTAGATCCTGCCATCATCCTCCCATTGTATACCGCTGGTATATGCTGGACACTCGTATATGATACCATATATGCACATCAGGACAAAGAAGATGACCTCAAAGTAGGGGTCAAGTCCACAGCATTAAGGTTTGGAGATTTAACAAATCACTGGATTAGTGGCTTCGGTGTTGCATGCATTGGCAGCTTAGCACTCAGTGGCTACAGTGCTGACCTTGCATGGCCTTACTATCCTTTTCTAGCTGCTGCATCTGCGCAGTTAGCATGGCAGATTTCAACTGTTGATTTATCTGACCGCCTGGATTGCAACAGGAAATTTGTGTCCAATAAGTGGTTTGGCGCTTTGATATTTGGTGGAGTTTTATGTGGACGACTTGTATCATGATAATTATGAGCCACGAGTTTATTATGGTTCATGGTAGTGTTTTCAGTGGAAAATTCGTAATTTTGATAGAATAGAAAGACTCTTGACAAAACTTAGGATGCGCAAACCTCCAAAGAATGGAAAGTTGATTCAAAAAGAAAGAAAGAAAGAATGGGAGTTAGGGCTTGGGTTTCCTCTGTGGCGCGCTAGTTCCAATTTCATATCATGCAGTGCAGTCTCATTTCTATTTTTATTGGATGAAAGCCCTTATCCATGTTGAGGACTGCTATGCCCTGCTTTATGCATCAAGTTGCAGAATGAACTTTTGTTATTTCCTGAGCACTTTGTGACAATGTTCCCCATCTTCTGTTCAAAAGATAAACCAGGGAACATGATAAAATATTGATGCAGATTGTTGTGCATTTACAAGACTCTTCTGAATTCTGATGCTCCTTATTCATGACAAGGCTAATTAATTCAGTCTAACACCAAACATATTTTTACGGGACTAAGATGTAAATTGTGCCATACATTTTTTTCCCATGGATAGCAGTTGGACAGAACTATCATAATGTATTTACCGGTTATACCGATTAGTTCATTTTGTTACCACGATCTTGTTACCATGTTCGATGTGTCCCTTGCAGTCTTGTAGAGTTCTCTTGCACATTCTCTGTTTGATATGATGTTGATTTTTTAGAGAGAGAAAGATGTTGATTCAGTTGTTAGACTTGTTCTATGAGAACATGATCAGTATATGAGGTATT]
[+] EMBL CB631810             [                                                                                                                                                                                                                                    TCTTCCTCCTACGTCGGAAGGGGGATCCTGCTCCCCGCGACCTTCTCGATCTACTCTCCCCTCTCTACCTCCTCCTCCGCCTCCCCCGACGGCTCCCCGGATGAGGATTCCTCGCCGCCGCACCCGTCTCCCGCGGCGGCGCCTCCGTCCTCGTGGGTTGACAGGTGGCTCCCACAGGCGGCGCGCCCCTACGCCATGCTTGCCCGCCTCGACAAGCCCATCGGCACCTGGCTCCTCGCGTGGCCCTGCTTCTGGTCAATCTCAATGGCGGCGATGCCGGGGGAGCTGCCTGACATGAGAATGCTGGCACTCTTCGGATGTGGAGCCGTCCTCCTCAGAGGCGCTGGATGCACGGTCAATGATCTTCTTGATCGAGACATTGATAACAAGGTTGAGCGCACCAAAAGCAGGCCTTTTGCATCAGGCATTCTAACCCCTACACAAGGAGTGGGCTTCCTTGGATTGCAGCTTTTACTGGGATTGGGCATTCTTCTCCAACTAAATAACTATAGCCGTATTCTTGGGGCATCTTCAC TTCTTTTGGTCTTCTCTTATCCCTTGATGAAGAGATTCACATTTTGGCCTCAGGCGTATCTTGGCTTGACCTTTAATTGGGGAGCTTTGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB631811             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACAAGGTTGAGCGCACCAAAAGCAGGCCTTTTGCATCAGGCATTCTAACCCCTACACAAGGAGTGGGCTTCCTTGGATTGCAGCTTTTACTGGGATTGGGCATTCTTCTCCAACTAAATAACTATAGCCGTATTCTTGGGGCATCTTCAC TTCTTTTGGTCTTCTCTTATCCCTTGATGAAGAGATTCACATTTTGGCCTCAGGCGTATCTTGGCTTGACCTTTAATTGGGGAGCTTTGTTAGGATGGGCTGCCATTAAAGAAAGCTTAGATCCTGCCATCATCCTCCCATTGTATACCGCTGGTATATGCTGGACACTCGTATATGATACCATATATGCACATCAGGACAAAGAAGATGACCTCAAAGTAGGGGTCAAGTCCACAGCATTAAGGTTTGGAGATTTAACAAAACACTGGATTAGTGGCTTCGGTGTTGCATGCATTGGCAGCTTAGCACTCAGTGGCTACAGTGCTGACCTTGCATGGCCTTACTATCCTTTTCTAGCTGCTGCATCTGCGCAGTTAGCATGGCAGATTTCAACTGTTGATTTATCTGACCGCCTGGATTGCAACAGGAAATTTGTGTCCAATAAGTGGTTTGGCGCTTTGATATTTGGTGGAGTTTTATGTGGACGACTTGTATCATGATAATTATGAGCCACGAGTTTATTATGGTTCATGGTAGTGTTTTCAGTGGAAAATTCGTAATTTTGATAGAATAGAAAGACTCTTGACAAAACTTAGGGGGCGCAAACCTCCAAAGAATGGAAAGTTGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_7534#0 AAGCCCATGGCTCTACTCCGAGCAGCCGCCGCCGCCGACCTCCTCCGCCGCCACCGCCGC GCCCCGCTCCCACTCTTACTCTCCGCTCTCTCGCCGCCTCCACCGACCACCCCGGAATCC TGCCCCGACGGCCCCAGTCCCGTCGCCCCATACTTCGCTCCGCCTCCGCCTCCGCTATGC CGCCGCCGTCGGAGCTGGCCGCCTCCGCCTCCGCCTCCGCGCGTCTCGTCTTCCTCCTAC GTCGGCAGGGGGATCCTGCTCCCCGCGACCTTCTCGATCTACTCTCCCCTCTCTACCTCC TCCTCCGCCTCCCCCGACGGCTCCCCGGATGAGGATTCCTCGCCGCCGCACCCGTCTCCC GCGGCGGCGCCTCCGTCCTCGTGGGTTGACAGGTGGCTCCCACAGGCGGCGCGCCCCTAC GCCATGCTTGCCCGCCTCGACAAGCCCATCGGCACCTGGCTCCTCGCGTGGCCCTGCTTC TGGTCAATCTCAATGGCGGCGATGCCGGGGGAGCTGCCTGACATGAGAATGCTGGCACTC TTCGGATGTGGAGCCGTCCTCCTCAGAGGCGCTGGATGCACGGTCAATGATCTTCTTGAT CGAGACATTGATAACAAGGTTGAGCGCACCAAAAGCAGGCCTTTTGCATCAGGCATTCTA ACCCCTACACAAGGAGTGGGCTTCCTTGGATTGCAGCTTTTACTGGGATTGGGCATTCTT CTCCAACTAAATAACTATAGCCGTATTCTTGGGGCATCTTCACTTTTTTTGGTCTTCTCT TATCCCTTGATGAAGAGATTCACATTTTGGCCTCAGGCGTATCTTGGCTTGACCTTTAAT TGGGGAGCTTTGTTAGGATGGGCTGCCATTAAAGAAAGCTTAGATCCTGCCATCATCCTC CCATTGTATACCGCTGGTATATGCTGGACACTCGTATATGATACCATATATGCACATCAG GACAAAGAAGATGACCTCAAAGTAGGGGTCAAGTCCACAGCATTAAGGTTTGGAGATTTA ACAAAACACTGGATTAGTGGCTTCGGTGTTGCATGCATTGGCAGCTTAGCACTCAGTGGC TACAGTGCTGACCTTGCATGGCCTTACTATCCTTTTCTAGCTGCTGCATCTGCGCAGTTA GCATGGCAGATTTCAACTGTTGATTTATCTGACCGCCTGGATTGCAACAGGAAATTTGTG TCCAATAAGTGGTTTGGCGCTTTGATATTTGGTGGAGTTTTATGTGGACGACTTGTATCA TGATAATTATGAGCCACGAGTTTATTATGGTTCATGGTAGTGTTTTCAGTGGAAAATTCG TAATTTTGATAGAATAGAAAGACTCTTGACAAAACTTAGGATGCGCAAACCTCCAAAGAA TGGAAAGTTGATTCAAAAAGAAAGAAAGAAAGAATGGGAGTTAGGGCTTGGGTTTCCTCT GTGGCGCGCTAGTTCCAATTTCATATCATGCAGTGCAGTCTCATTTCTATTTTTATTGGA TGAAAGCCCTTATCCATGTTGAGGACTGCTATGCCCTGCTTTATGCATCAAGTTGCAGAA TGAACTTTTGTTATTTCCTGAGCACTTTGTGACAATGTTCCCCATCTTCTGTTCAAAAGA TAAACCAGGGAACATGATAAAATATTGATGCAGATTGTTGTGCATTTACAAGACTCTTCT GAATTCTGATGCTCCTTATTCATGACAAGGCTAATTAATTCAGTCTAACACCAAACATAT TTTTACGGGACTAAGATGTAAATTGTGCCATACATTTTTTCCCATGGATAGCAGTTGGAC AGAACTATCATAATGTATTTACCGGTTATACCGATTAGTTCATTTTGTTACCACGATCTT GTTACCATGTTCGATGTGTCCCTTGCAGTCTTGTAGAGTTCTCTTGCACATTCTCTGTTT GATATGATGTTGATTTTTTAGAGAGAGAAAGATGTTGATTCAGTTGTTAGACTTGTTCTA TGAGAACATGATCAGTATATGAGGTATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)