These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7550#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2654 fasta sequence [CTAGCCGAGCCAGAGTCCTCGACGCAACGATCTCGCTCTTCCCCCTTTTCGTTCTCGCCTCGCCGCACGCGACGATCGCCGCCGCGGCCGACTCGCCTCGCCGCCGCCGGGGCGGGAGACCGCCGCCCGATC-GGGGGGGGGGGGCCCGCGGCAGCCATGGTGCACAGCGCGTACGACGCCGTCGAGCTGGTCTCCGGCGTGCCGGGCGACATCGTGGCCGTGGCCGCCTACGCCGGGAGGCTCCTCGTCGCGGGGAAGGACGGCTCCCTCCGCATCTACGCCTCCCCGGGCCACGCCGGCGGCGGGATCCCGCGGGACGGGCCGTACGCGCTGGAGCGGCAGCAGCCCTCGCTGTGGCGCCGCGGGACGCCCCTGGCGATGGAGGTCAGCGCCGGCCGCGAGCTCCTGCTCTCGCTCGCCGAGTGCGTCAACCTCCACCGCCTCCCCGGGCTCGAGACCGTCGCCGTCATCGGGAAGACCAAGGGCGCCAACCTCTTCGCCTGGGACGACCGCCGGGGCCTCCTCGCGGTCGGCCGCTGGGAGCGCCTGACCATCTTCCGCCTTGACAGTGGGAGGGAGTTTGTTGAGGTGAAGGAATTTGGAGTTCCGGATACCGTGAAATCAATGGCCTGGTGTGGCGACAACATTTGTCTTGGGATTAGAAAGGAGTATATGATCATAAATAGTATGACTGGTGCATTAACTGAAGTGTTTTCTTCTGGAAGGAATGCTCCACCTTTAGTTGTGGCTCTTCCTACTGGGGAGCTCCTCCTGGGAAAGGATAATATTGGAGTATTTGTTGACCAAAATGGGAAACTTATTCAAGATGGCAGGATAATTTGGTCAGACACGCCTGCCTCTGTTGCTATACATAGGCCATATGCGGTGGCACGCCTGCCACGGCATGTTGAGATACGGTCCCTTAGAGCCCCCAATGCATTGGTTCAGACGGTTGTACTTCGTGATGTTCAAAAGCTTGTTGAAACTGAGAACTGTATACTTGCTGTGCTAGCCCGCTCTGTTTATGGCTTGTTGCCTGTTCCTATTGGTGCCCAGATAGTGCAGTTGACTGCATCTGGTGAATTTGAGGAGGCTCTGGCGTTGTGTAAGCTACTTCCTCCAGAGGATTCAAACCTACGAGCTGCAAAGGAAAGCTCAATACACATAAGATATGGACACTTTTTATTTGATAATGGGAGCTATGAGGAGGCAATGGAGCAGTTCTCTGATTCACATGTGGATATTACTTATGTCCTATCTCTATATCCATCTCTTGTTCTGCCTCAAACGCACATCATAGGTGAACATGACCGGCTGCAAGATCTGCCAGAATTAGCAAGAGAATCATCTGATGTGACAGATGATATGGAACCATACTCTCTACAACTTCATGAATCTGATGATAAATCTCCATTGGAGATAAAGAAAATGAGCCACAATGCTCTAATTGCCCTTGTGAAGTATTTGCACAAGAAAAGAAATGGAATAATTGAGAGAGCAACAGCTGAAGTCACCGAGGAGGTGGTCTCTGGAGCTGTGCACCACAGCTCAATCTTATCTGAGTCATATCGATCAAAGAAGCCAAATAAGAAGCGAGCTCAGACGCATACAAGCTCTATTGCTAGAGAAATGGCTACTGTACTGGACACATCTCTTCTTCAAGCTCTTATTCTTACTGGACAGTCTTCAGGGGCAATAGAATTGTTGAAGGGACTTAACTATTGTGATCTGAAGATATGCAAAGAATTTTTAGAGGAAAGGAGCGATTATATGGTGTTACTTGAGCTCTACAAAAGCAATGAGATGCACCGTGAAGCTCTCCAACTGCTTAATCAATTAGTTGAAGAATCAAAGGCTGAGATGGGAAAAAATGATTTTAACAAAAAGTTCAATCCACAAATGATCATTGAATATCTAAGGCCCCTCTGTCGGTCTGACCCAATGCTGGTTTTGGAATCATCTTTATATGTCCTTGAACGCAACCCTTCAGACACTATTGAGCTCTTTTTATCAGAAAATGTTCCAGCAGATTTAGTAAATTCATATCTAAAACAGCATGCTCCAAATTTGCAGTCAACTTACTTGGAACTAATGCTTTCAATGAGTGTATCTGGGATCAACCCTAATCTGCAAAATGAGCTGGTACAACTATACCTTTCTGAGGTTCTTGACTGGCACAAGATTCTGAAGGAAGAGGGAAACTGGACTGAGAAAACATATTCCCCAACACGGAAGAAGCTGATAACTACATTAGAGAACAATTCAGGTTACAACACAGATATACTTCTTAAGCGTCTTCCGCAAGATGCTCTTTTTGAAGAGCGCGCTATATTGTATGGGAAAATAAATCAACATCTCCGTGCACTCTCTCTTTATGTGCATAAGCTCCAGATGCCAGAGCGAGCAGTTGCATATTGTGACCGTGTTTACGAGGAAGGAGCACAACAACCTTCCAAATCAAATATCTATTTCAATCTCCTACAAATCTATCTGAACCCAAGAAAAGCTGAAAAGGAATTTGAGCAGAAAATTGTTCCAGTGGCATCACAGTACCCTGGAATTCAGAAGGTTACTAAGGTTAGAGGGGCGCGTATGGGTAAAAAGGTTGTTGAGATTGAAGGGGCTGATGATGTGCGCTTTAGCCCCAGTGGAAC] [+] EMBL AK071327 [CTAGCCGAGCCAGAGTCCTCGACGCAACGATCTCGCTCTTCCCCCTTTTCGTTCTCGCCTCGCCGCACGCGACGATCGCCGCCGCGGCCGACTCGCCTCGCCGCCGCCGGGGCGGGAGACCGCCGCCCGATC GGGGGGGGGGGGCCCGCGGCAGCCATGGTGCACAGCGCGTACGACGCCGTCGAGCTGGTCTCCGGCGTGCCGGGCGACATCGTGGCCGTGGCCGCCTACGCCGGGAGGCTCCTCGTCGCGGGGAAGGACGGCTCCCTCCGCATCTACGCCTCCCCGGGCCACGCCGGCGGCGGGATCCCGCGGGACGGGCCGTACGCGCTGGAGCGGCAGCAGCCCTCGCTGTGGCGCCGCGGGACGCCCCTGGCGATGGAGGTCAGCGCCGGCCGCGAGCTCCTGCTCTCGCTCGCCGAGTGCGTCAACCTCCACCGCCTCCCCGGGCTCGAGACCGTCGCCGTCATCGGGAAGACCAAGGGCGCCAACCTCTTCGCCTGGGACGACCGCCGGGGCCTCCTCGCGGTCGGCCGCTGGGAGCGCCTGACCATCTTCCGCCTTGACAGTGGGAGGGAGTTTGTTGAGGTGAAGGAATTTGGAGTTCCGGATACCGTGAAATCAATGGCCTGGTGTGGCGACAACATTTGTCTTGGGATTAGAAAGGAGTATATGATCATAAATAGTATGACTGGTGCATTAACTGAAGTGTTTTCTTCTGGAAGGAATGCTCCACCTTTAGTTGTGGCTCTTCCTACTGGGGAGCTCCTCCTGGGAAAGGATAATATTGGAGTATTTGTTGACCAAAATGGGAAACTTATTCAAGATGGCAGGATAATTTGGTCAGACACGCCTGCCTCTGTTGCTATACATAGGCCATATGCGGTGGCACGCCTGCCACGGCATGTTGAGATACGGTCCCTTAGAGCCCCCAATGCATTGGTTCAGACGGTTGTACTTCGTGATGTTCAAAAGCTTGTTGAAACTGAGAACTGTATACTTGCTGTGCTAGCCCGCTCTGTTTATGGCTTGTTGCCTGTTCCTATTGGTGCCCAGATAGTGCAGTTGACTGCATCTGGTGAATTTGAGGAGGCTCTGGCGTTGTGTAAGCTACTTCCTCCAGAGGATTCAAACCTACGAGCTGCAAAGGAAAGCTCAATACACATAAGATATGGACACTTTTTATTTGATAATGGGAGCTATGAGGAGGCAATGGAGCAGTTCTCTGATTCACATGTGGATATTACTTATGTCCTATCTCTATATCCATCTCTTGTTCTGCCTCAAACGCACATCATAGGTGAACATGACCGGCTGCAAGATCTGCCAGAATTAGCAAGAGAATCATCTGATGTGACAGATGATATGGAACCATACTCTCTACAACTTCATGAATCTGATGATAAATCTCCATTGGAGATAAAGAAAATGAGCCACAATGCTCTAATTGCCCTTGTGAAGTATTTGCACAAGAAAAGAAATGGAATAATTGAGAGAGCAACAGCTGAAGTCACCGAGGAGGTGGTCTCTGGAGCTGTGCACCACAGCTCAATCTTATCTGAGTCATATCGATCAAAGAAGCCAAATAAGAAGCGAGCTCAGACGCATACAAGCTCTATTGCTAGAGAAATGGCTACTGTACTGGACACATCTCTTCTTCAAGCTCTTATTCTTACTGGACAGTCTTCAGGGGCAATAGAATTGTTGAAGGGACTTAACTATTGTGATCTGAAGATATGCAAAGAATTTTTAGAGGAAAGGAGCGATTATATGGTGTTACTTGAGCTCTACAAAAGCAATGAGATGCACCGTGAAGCTCTCCAACTGCTTAATCAATTAGTTGAAGAATCAAAGGCTGAGATGGGAAAAAATGATTTTAACAAAAAGTTCAATCCACAAATGATCATTGAATATCTAAGGCCCCTCTGTCGGTCTGACCCAATGCTGGTTTTGGAATCATCTTTATATGTCCTTGAACGCAACCCTTCAGACACTATTGAGCTCTTTTTATCAGAAAATGTTCCAGCAGATTTAGTAAATTCATATCTAAAACAGCATGCTCCAAATTTGCAGTCAACTTACTTGGAACTAATGCTTTCAATGAGTGTATCTGGGATCAACCCTAATCTGCAAAATGAGCTGGTACAACTATACCTTTCTGAGGTTCTTGACTGGCACAAGATTCTGAAGGAAGAGGGAAACTGGACTGAGAAAACATATTCCCCAACACGGAAGAAGCTGATAACTACATTAGAGAACAATTCAGGTTACAACACAGATATACTTCTTAAGCGTCTTCCGCAAGATGCTCTTTTTGAAGAGCGCGCTATATTGTATGGGAAAATAAATCAACATCTCCGTGCACTCTCTCTTTATGTGCATAAGCTCCAGATGCCAGAGCGAGCAGTTGCATATTGTGACCGTGTTTACGAGGAAGGAGCACAACAACCTTCCAAATCAAATATCTATTTCAATCTCCTACAAATCTATCTGAACCCAAGAAAAGCTGAAAAGGAATTTGAGCAGAAAATTGTTCCAGTGGCATCACAGTACCCTGGAATTCAGAAGGTTACTAAGGTTAGAGGGGCGCGTATGGGTAAAAAGGTTGTTGAGATTGAAGGGGCTGATGATGTGCGCTTTAGCCCCAGTGGAAC] [+] EMBL AK120055 [ CAGAGTCCTCGACGCAACGATCTCGCTCTTCCCCCTTTTCGTTCTCGCCTCGCCGCACGCGACGATCGCCGCCGCGGCCGACTCGCCTCGCCGCCGCCGGGGCGGGAGACCGCCGCCCGATCGGGGGGGGGGGGGCCCGCGGCAGCCATGGTGCACAGCGCGTACGACGCCGTCGAGCTGGTCTCCGGCGTGCCGGGCGACATCGTGGCCGTGGCCGCCTACGCCGGGAGGCTCCTCGTCGCGGGGAAGGACGGCTCCCTCCGCATCTACGCCTCCCCGGGCCACGCCGGCGGCGGGATCCCGCGGGACGGGCCGTACGCGCTGGAGCGGCAGCAGCCCTCGCTGTGGCGCCGCGGGACGCCCCTGGCGATGGAGGTCAGCGCCGGCCGCGAGCTCCTGCTCTCGCTCGCCGAGTGCGTCAACCTCCACCGCCTCCCCGGGCTCGAGACCGTCGCCGTCATCGGGAAGACCAAGGGCGCCAACCTCTTCGCCTGGGACGACCGCCGGGGCCTCCTCGCGGTCGGCCGCTGGAAGCGCCTGACCATCTTCCGCCTTGACAGTGGGAGGGAGTTTGTTGAGGTGAAGGAATTTGGAGTTCCGGATACCGTGAAATCAATGGCCTGGTGTGGCGACAACATTTGTCTTGGGATTAGAAAGGAGTATATGATCATAAATAGTATGACTGGTGCATTAACTGAAGTGTTTTCTTCTGGAAGGAATGCTCCACCTTTAGTTGTGGCTCTTCCTACTGGGGAGCTCCTCCTGGGAAAGGATAATATTGGAGTATTTGTTGACCAAAATGGGAAACTTATTCAAGATGGCAGGATAATTTGGTCAGACACGCCTGCCTCTGTTGCTATACATAGGCCATATGCGGTGGCACGCCTGCCACGGCATGTTGAGATACGGTCCCTTAGAGCCCCCAATGCATTGGTTCAGACGGTTGTACTTCGTGATGTTCAAAAGCTTGTTGAAACTGAGAACTGTATACTTGCTGTGCTAGCCCGCTCTGTTTATGGCTTGTTGCCTGTTCCTATTGGTGCCCAGATAGTGCAGTTGACTGCATCTGGTGAATTTGAGGAGGCTCTGGCGTTGTGTAAGCTACTTCCTCCAGAGGATTCAAACCTACGAGCTGCAAAGGAAAGCTCAATACACATAAGATATGGACACTTTTTATTTGATAATGGGAGCTATGAGGAGGCAATGGAGCAGTTCTCTGATTCACATGTGGATATTACTTATGTCCTATCTCTATATCCATCTCTTGTTCTGCCTCAAACGCACATCATAGGTGAACATGACCGGCTGCAAGATCTGCCAGAATTAGCAAGAGAATCATCTGATGTGACAGATGATATGGAACCATACTCTCTACAACTTCATGAATCTGATGATAAATCTCCATTGGAGATAAAGAAAATGAGCCACAATGCTCTAATTGCCCTTGTGAAGTATTTGCACAAGAAAAGAAATGGAATAATTGAGAGAGCAACAGCTGAAGTCACCGAGGAGGTGGTCTCTGGAGCTGTGCACCACAGCTCAATCTTATCTGAGTCATATCGATCAAAGAAGCCAAATAAGAAGCGAGCTCAGACGCATACAAGCTCTATTGCTAGAGAAATGGCTACTGTACTGGACACATCTCTTCTTCAAGCTCTTATTCTTACTGGACAGTCTTCAGGGGCAATAGAATTGTTGAAGGGACTTAACTATTGTGATCTGAAGATATGCAAAGAATTTTTAGAGGAAAGGAGCGATTATATGGTGTTACTTGAGCTCTACAAAAGCAATGAGATGCACCGTGAAGCTCTCCAACTGCTTAATCAATTAGTTGAAGAATCAAAGGCTGAGATGGGAAAAAATGATTTTAACAAAAAGTTCAATCCACAAATGATCATTGAATATCTAAGGCCCCTCTGTCGGTCTGACCCAATGCTGGTTTTGGAATCATCTTTATATGTCCTTGAACGCAACCCTTCAGACACTATTGAGCTCTTTTTATCAGAAAATGTTCCAGCAGATTTAGTAAATTCATATCTAAAACAGCATGCTCCAAATTTGCAGTCAACTTACTTGGAACTAATGCTTTCAATGAGTGTATCTGGGATCAACCCTAATCTGCAAAATGAGCTGGTACAACTATACCTTTCTGAGGTTCTTGACTGGCACAAGATTCTGAAGGAAGAGGGAAACTGGACTGAGAAAACATATTCCCCAACACGGAAGAAGCTGATAACTACATTAGAGAACAATTCAGGTTACAACACAGATATACTTCTTAAGCGTCTTCCGCAAGATGCTCTTTTTGAAGAGCGCGCTATATTGTATGGGAAAATAAATCAACATCTCCGTGCACTCTCTCTTTATGTGCATAAGCTCCAGATGCCAGAGCGAGCAGTTGCATATTGTGACCGTGTTTACGAGGAAGGAGCACAACAACCTTCCAAATCAAATATCTATTTCAATCTCCTACAAATCTATCTGAACCCAAGAAAAGCTGAAAAGGAATTTGAGCAGAAAATTGTTCCAGTGGCATCACAGTACCCTGGAATTCAGAAGGTTACTAAGGTTAGAGGGGCGCGTATGGGTAAAAAGGTTGTTGAGATTGAAGGGGCTGATGATGTGCGCTTTAGCCCCAGTGGAc ] [+] EMBL AK068447 [ AGTTCCGGATACCGTGAAATCAATGGCCTGGTGTGGCGACAACATTTGTCTTGGGATTAGAAAGGAGTATATGATCATAAATAGTATGACTGGTGCATTAACTGAAGTGTTTTCTTCTGGAAGGAATGCTCCACCTTTAGTTGTGGCTCTTCCTACTGGGGAGCTCCTCCTGGGAAAGGATAATATTGGAGTATTTGTTGACCAAAATGGGAAACTTATTCAAGATGGCAGGATAATTTGGTCAGACACGCCTGCCTCTGTTGCTATACATAGGCCATATGCGGTGGCACGCCTGCCACGGCATGTTGAGATACGGTCCCTTAGAGCCCCCAATGCATTGGTTCAGACGGTTGTACTTCGTGATGTTCAAAAGCTTGTTGAAACTGAGAACTGTATACTTGCTGTGCTAGCCCGCTCTGTTTATGGCTTGTTGCCTGTTCCTATTGGTGCCCAGATAGTGCAGTTGACTGCATCTGGTGAATTTGAGGAGGCTCTGGCGTTGTGTAAGCTACTTCCTCCAGAGGATTCAAACCTACGAGCTGCAAAGGAAAGCTCAATACACATAAGATATGGACACTTTTTATTTGATAATGGGAGCTATGAGGAGGCAATGGAGCAGTTCTCTGATTCACATGTGGATATTACTTATGTCCTATCTCTATATCCATCTCTTGTTCTGCCTCAAACGCACATCATAGGTGAACATGACCGGCTGCAAGATCTGCCAGAATTAGCAAGAGAATCATCTGATGTGACAGATGATATGGAACCATACTCTCTACAACTTCATGAATCTGATGATAAATCTCCATTGGAGATAAAGAAAATGAGCCACAATGCTCTAATTGCCCTTGTGAAGTATTTGCACAAGAAAAGAAATGGAATAATTGAGAGAGCAACAGCTGAAGTCACCGAGGAGGTGGTCTCTGGAGCTGTGCACCACAGCTCAATCTTATCTGAGTCATATCGATCAAAGAAGCCAAATAAGAAGCGAGCTCAGACGCATACAAGCTCTATTGCTAGAGAAATGGCTACTGTACTGGACACATCTCTTCTTCAAGCTCTTATTCTTACTGGACAGTCTTCAGGGGCAATAGAATTGTTGAAGGGACTTAACTATTGTGATCTGAAGATATGCAAAGAATTTTTAGAGGAAAGGAGCGATTATATGGTGTTACTTGAGCTCTACAAAAGCAATGAGATGCACCGTGAAGCTCTCCAACTGCTTAATCAATTAGTTGAAGAATCAAAGGCTGAGATGGGAAAAAATGATTTTAACAAAAAGTTCAATCCACAAATGATCATTGAATATCTAAGGCCCCTCTGTCGGTCTGACCCAATGCTGGTTTTGGAATCATCTTTATATGTCCTTGAACGCAACCCTTCAGACACTATTGAGCTCTTTTTATCAGAAAATGTTCCAGCAGATTTAGTAAATTCATATCTAAAACAGCATGCTCCAAATTTGCAGTCAACTTACTTGGAACTAATGCTTTCAATGAGTGTATCTGGGATCAACCCTAATCTGCAAAATGAGCTGGTACAACTATACCTTTCTGAGGTTCTTGACTGGCACAAGATTCTGAAGGAAGAGGGAAACTGGACTGAGAAAACATATTCCCCAACACGGAAGAAGCTGATAACTACATTAGAGAACAATTCAGGTTACAACACAGATATACTTCTTAAGCGTCTTCCGCAAGATGCTCTTTTTGAAGAGCGCGCTATATTGTATGGGAAAATAAATCAACATCTCCGTGCACTCTCTCTTTATGTGCATAAGCTCCAGATGCCAGAGCGAGCAGTTGCATATTGTGACCGTGTTTACGAGGAAGGAGCACAACAACCTTCCAAATCAAATATCTATTTCAATCTCCTACAAATCTATCTGAACCCAAGAAAAGCTGAAAAGGAATTTGGGCAGAAAATTGTTCCAGTGGCATCACAGTACCCTGGAATTCAGAAGGTTACTAAGGTTAGAGGGGCGCGTATGGGTAAAAAGGTTGTTGAGATTGAAGGGGCTGATGATGTGCGCTTTAGCCCCAGTGGAAC] [+] EMBL CB633113 [ TTGTCTTGGGATTAGAAAGGAGTATATGATCATAAATAGTATGACTGGTGCATTAACTGAAGTGTTTTCTTCTGGAAGGAATGCTCCACCTTTAGTTGTGGCTCTTCCTACTGGGGAGCTCCTCCTGGGAAAGGATAATATTGGAGTATTTGTTGACCAAAATGGGAAACTTATTCAAGATGGCAGGATAATTTGGTCAGACACGCCTGCCTCTGTTGCTATACATAGGCCATATGCGGTGGCACGCCTGCCACGGCATGTTGAGATACGGTCCCTTAGAGCCCCCAATGCATTGGTTCAGACGGTTGTACTTCGTGATGTTCAAAAGCTTGTTGAAACTGAGAACTGTATACTTGCTGTGCTAGCCCGCTCTGTTTATGGCTTGTTGCCTGTTCCTATTGGTGCCCAGATAGTGCAGTTGACTGCATCTGGTGAATTTGAGGAGGCTCTGGCGTTGTGTAAGCTACTTCCTCCAGAGGATTCAAACCTACGAGCTGCAAAGGAAAGCTCAATACACATAAGATATGGACACTTTTTATTTGATAATGGGAGCTATGAGGAGGCAATGGAGCAGTTCTCTGATTCACATGTGGATATTACTTATGTCCTATCTCTATATCCATCTCTTGTTCTGCCTCAAACGCACATCATAGGTGAACATGACCGGCTGCAAGATCTGCCAGAATTAGCAAGAGAATCATCTGATGTGACAGATGATATGGAACCATACTCTCTACAACTTCATGAATCTGATGATAAATCTCCATTGGAGATAAAGAANATGAGCCACAATGCTCTAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||