These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7563#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1646 fasta sequence [CCAAGTTGATGGGGATAATTTTTCTTATCAAGTCAAGCTTCAAGAGGGTGGTGATTGCACACATTATGAGAGCAAATTAGATGATTAAGTTGCAAACAGCAGGAGCTATTGCTAGTAGCATATTAACTGGAATATATTGCTAAGCATATCATAGTTTCAAAAGATGGAATTCTTTTAATCGACATGTATCCTACTTTACTCGGGATTTAAGGAGGTATGCTGTAGACCGCGGAACTATCACAAAGGAAAAGGTTATTCTCTTTCTTCATGGATTTCTTGGTACGAGTGAAGACTGGGTTCCAATGATGAAAGCTCTCTCTCCTAGTGCACGGGTTATAGCTGTCGATCTTCCTGGCCATGGCGAGTCCGAAATTCTACAGCATGATGTTGAAAACTCCAACCAAATCTCCTTTTCAGTTCAATCAGTTGCAGATTTGTTACTGAAGTTGATAAGAAATATAACTGATGGAGCGGTGGTTGTTGTTGGCTACTCAATGGGTGCAAGGATTGCACTACACATGGCATTAAATCAAAACCACAAGATAAGTGGAGCTGTTATAATTTCGGGTAGTCCTGGATTGAGAGACGAGGCAAGTAAAAGACGTCGTAGTGCTATTGATAGATCAAGAGCCCACTTCCTGTCTTCTTGTGGACTGGAAAATTTTCTCGAGACGTGGTACTCTGCGAAAATGTGGGCCAGTTTACGAGAACATCCTAAATTTGATTCTCTAGTGAGGACACGAATGAAACACAATAATATCAAAGCTCTATCTAAGGTTCTCGCTGACTCAAGCATAGGGACGCAAAAGTCCCTGTGGGAAGATTTGAAGCACTTGAAGAGCCCTCTCCTCATCGTCGCAGGTGAAAAGGACCCAAAATTCAAAGAGATATCGCAGCAAATGTGCAGGGAGATAAGAAAGCACAAGGATCGCGAATCCGATGGTCTATGTGAGATGATCATTATTCCAGACAGCGGCCACGCCGTGCACGTTGAGAACCCTCTTCCTTTAGTTAGAGCAATCAGGAAGTTCTTGGTAAGGGATATACCAGACGTGATATCCAAGTAGATTACGAAATGGAATTATCTATGTAGAGGAGTTCAAGTTACAGCGATAGCCAGAGACAGCAGAGCAGACCAACTCTTTGGTGCGGATGGGTGCGGCAGTTCTGGATGCTATTCTGCCGCCGGTAGTCTCACCTACACCAGCCCGGGAACTATTCTCATTGTGGACTGGTGGGGGAGGATTAAAGATTAGATCCAGAGAGAAGGGATGTGACTCCATTATCATGCAAAGTTCCTAACCATGTGACAGACTTGGTAAGGAAAGAACGCAATGCGAGGGTCTTC-AGAGATGAAGATTCTTCCCTCCAACGAGTAGCAGGAAAAATCATCATTGATGAGCTTCA-C-GTATAGCGGTATAGGAGTACTTGTGAGGACGAATTCTAGGAGTACTTGTGTGCTGCAGCATTGTCCCGAGCTGTACAGTGCTCTTTTCATATTTTGCTGCTCTGTATATGCTGTTGCCTGTTGGTTAGTTGCCACTCTCTCTCG-CCGTGACCCTTTTTTATTAATACAAAATGATATGCAAGTCCTATGCATATCCGTGAAAAAAACATGTTGGCCAGCTTCAAAAAAAAAAAAAAAA] [+] EMBL AK059396 [CCAAGTTGATGGGGATAATTTTTCTTATCAAGTCAAGCTTCAAGAGGGTGGTGATTGCACACATTATGAGAGCAAATTAGATGATTAAGTTGCAAACAGCAGGAGCTATTGCTAGTAGCATATTAACTGGAATATATTGCTAAGCATATCATAGTTTCAAAAGATGGAATTCTTTTAATCGACATGTATCCTACTTTACTCGGGATTTAAGGAGGTATGCTGTAGACCGCGGAACTATCACAAAGGAAAAGGTTATTCTCTTTCTTCATGGATTTCTTGGTACGAGTGAAGACTGGGTTCCAATGATGAAAGCTCTCTCTCCTAGTGCACGGGTTATAGCTGTCGATCTTCCTGGCCATGGCGAGTCCGAAATTCTACAGCATGATGTTGAAAACTCCAACCAAATCTCCTTTTCAGTTCAATCAGTTGCAGATTTGTTACTGAAGTTGATAAGAAATATAACTGATGGAGCGGTGGTTGTTGTTGGCTACTCAATGGGTGCAAGGATTGCACTACACATGGCATTAAATCAAAACCACAAGATAAGTGGAGCTGTTATAATTTCGGGTAGTCCTGGATTGAGAGACGAGGCAAGTAAAAGACGTCGTAGTGCTATTGATAGATCAAGAGCCCACTTCCTGTCTTCTTGTGGACTGGAAAATTTTCTCGAGACGTGGTACTCTGCGAAAATGTGGGCCAGTTTACGAGAACATCCTAAATTTGATTCTCTAGTGAGGACACGAATGAAACACAATAATATCAAAGCTCTATCTAAGGTTCTCGCTGACTCAAGCATAGGGACGCAAAAGTCCCTGTGGGAAGATTTGAAGCACTTGAAGAGCCCTCTCCTCATCGTCGCAGGTGAAAAGGACCCAAAATTCAAAGAGATATCGCAGCAAATGTGCAGGGAGATAAGAAAGCACAAGGATCGCGAATCCGATGGTCTATGTGAGATGATCATTATTCCAGACAGCGGCCACGCCGTGCACGTTGAGAACCCTCTTCCTTTAGTTAGAGCAATCAGGAAGTTCTTGGTAAGGGATATACCAGACGTGATATCCAAGTAGATTACGAAATGGAATTATCTATGTAGAGGAGTTCAAGTTACAGCGATAGCCAGAGACAGCAGAGCAGACCAACTCTTTGGTGCGGATGGGTGCGGCAGTTCTGGATGCTATTCTGCCGCCGGTAGTCTCACCTACACCAGCCCGGGAACTATTCTCATTGTGGACTGGTGGGGGAGGATTAAAGATTAGATCCAGAGAGAAGGGATGTGACTCCATTATCATGCAAAGTTCCTAACCATGTGACAGACTTGGTAAGGAAAGAACGCAATGCGAGGGTCTTC AGAGATGAAGATTCTTCCCTCCAACGAGTAGCAGGAAAAATCATCATTGATGAGCTTCA C GTATAGCGGTATAGGAGTACTTGTGAGGACGAATTCTAGGAGTACTTGTGTGCTGCAGCATTGTCCCGAGCTGTACAGTGCTCTTTTCATATTTTGCTGCTCTGTATATGCTGTTGCCTGTTGGTTAGTTGCCACTCTCTCTCG CCGTGACCCTTTTTTATTAATACAAAATGATATGCAAGTCCTATG ] [+] EMBL BI118833 [ TCTTCCTTTAGTTAGGGCAATCAGGAAGGTCTTGGTGGGGGATATACCAGACGTGATATCCAAGTAGATTACGAAATGGAATTATCTATGTAGAGGAGTTCAAGTTACAGCGATAGCCAGAGACAGCAGAGCAGACCAACTCTTTGGTGCGGATGGGTGCGGCAGTTCTGGATGCTATTCTGCCGCCGGTAGTCTCACCTACACCAGCCCGGGAACTATTCTCATTGTGGACTGGTGGGGGAGGATTAAAGATTAGATCCAGAGAGAAGGGATGTGACTCCATTATCATGCAAAGTTCCTAACCATGTGACAGACTTGGTAAGGAAAGAACGCAATGCGAGGGTCTTCAAGAGATGAAGATTCTTCCCTCCAACGAGTAGCAGGAAAAATCATCATTGATGAGCTTCACC GTATAGCcgg ] [+] EMBL AU172750 [ TGGACTGGTGGGGGAGGATTAAAGATTAGATCCAGAGAGAAGGGATGTGACTCCATTATCATGCAAAGTTCCTAACCATGTGACAGACTTGGTAAGGAAAGAACGCAATGCGAGGGTCTTC ANAGATGAAGATTNTTCCCTCCAACGAGTAGCAGGAAAAATCATCATTGATGAGCTTCA CGGTANAGCGGTATAGGAGTACTTGTGAGGACGAATTNTAGGAGTACTTGTGTGCTGCAGCATTGTCCCGAGCTGNACAGTGCTCTTTTCATATTTTGCTGCTCTGTAAANGCTGTTGCCTGTTGGTTAGTTGCCACTCTCTCTCGCCCGTGACCCTTTTTTATTAATACAAAATGATATGCAAGTCCTATGCATATCCGTGAAAAAAACATGTTGGCCAGCTTCAAAAAAAAAAAAAAAA] [+] EMBL AU165202 [ C GTATAGCGGTATAGGAGTACTTGTGAGGACGAATTCTAGGAGTACTTGTGTGCTACAGCATTGTCCCGAGCTGTACAGTGCTCTTTTCATATTTTGCTGCTCTGTATATGCTGTTGCCTGTTGGTTATTTGCCACTCTCTCTCG CCGTGACCCTTTTTTATTAATACAAAATGATATGCAAGTCCTATGCATATCCGTGAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||