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Oryza sativa
cluster # 7565 cluster # 7565       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7565#0 length = 1985 sequences # 2  
consensus_7565#1 length = 773 sequences # 1  
consensus_7565#2 length = 750 sequences # 1  

consensusID : consensus_7565#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1985
fasta sequence
                              [TAGTCTCGTTCCCCAGCACTCCGTCGTTGACGGGAGCCACCAAAACAGGCCCGAGCCCCTGCAGCGCCGGCCACCGGTCGCCTCCACGCCGGTGCAGTCGTGCCCTAGCCGCCCCGGTGGCCTATCCCTAGGAATCCAGGTCCAGTTCCGACTCGCGCGGCGTGGCTAGCATCCTCCGCGCGTCCCCGTTACATGTCCCTTGTGCGTGCCACACATCAGCAATAGCGACCTCACCATCACATTTTCACTTGGTGTTGGTGGATCTGTGCTTGGTGATCAAGACGGTCAAGACCCTAAGGCAGTCAAGTGCATATGACGGCAGTAGATAAGATGGTCGTTTTCGTTTGGTTCAATTAAGCAAGCATCAGGGCTGCATCGACGCTGTATCTACTGGATCCTAATCCTAAGCTTCCAGGTTTTTTTACCATTATGGTGCACTTGGTTGTTCATTTAGCCACTGAAGCAAAATTAGGAGGTCCTGTGTGTTACCGATATATGTATTTTGTGGAAAGGTATTTGAGTGTATTAAAGTCATATGTGCGTAATAAGGCACATCCTGAAGGATGTCTTGCAGAAGCATATTTGGCAGATGAGTGTATAACATTTTGTTCAAGATATCTTGAAGGTTTTGAGACAAAGCATAACCAGCCTACACGAAATGATGATGATGATGAGTCAGTTGCATGTTCAGATGATGAATGCACACCATATCTTTTTCCTCATGTTGGAAAACCACTTGGCAAGCCGAGAAGTTATGTTATTAGGGGCTTGACTAAAATGCAAGCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACCTTCGAACTCATGCTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAAGATTATCGAGCGTATCCAAAATGAAAAATTCCATGAATGGTTCAGAGCTCATATAATGGATCTAGAGAGGAAAAATGGCATATGCAGTGTCAAGAATGATCATAGATGGCTGGCTCGTGGTCCGATTGGTCCAGCAAAAAGATATCGTGCTTTCAATACCCGTGGCTTCCGGTTTAGGCCTAAACATTTGGATGGAGTGACACAGAATAGCGGAGTTGTCCTAAGTGCAAAAACATCCAGTTATACTAAATCAAGTGACACAAATCCAATATTGGGTGATCTAACATACTATGGTAGAGTCATCGATATTATTGAGCTAAATTACTCTGGACAATTTTCAGTAGTACTGTTTAAATGTGAATGGGTTGATGTTGTTTCTGGAAAAGGAGTTAAAAAAGATAAGTATGGTTACACACTAGTTAACTTCTCACATCTCATACATACTGGAGAAAAAGTTGAGCATGAGCCTTTTATTTTCCCCAATCAAGCAGATCAAGTTTATTATGTTGATGATCCAATGAATCCTGAGTGGTCTGTGGTAAGGAAGAACAAACCTAGAGATATATATGACATTGGTGAGGATGAATGGGCAGGTGACATAGAAATTGAGCCATTCCATGTTTCACACCTTGGTGGAATGTCCAGTAATGCAAACAATTACAAGCAATGGGTTAGAACAGATGTTGAAGGAACAACAGTAGATGTTGATAATAATGCTTTGAATAATGAAGGATAACAGAGGAAAATAGTTACTCTTTCATGATTTATTTCATTACTTCAAGTTTCAGGTCCATTATTTTGATGCAGACGCAGTTACATTGGCAAGGTGGCATCGGGGTGTTACTGTTTCTTTCGGCAAGCGAAAGTGAACAAGCAGCTGTCACTAAGCAACATATGGCAGTTCTAGTCCAAGCAAACATGAGTTTAGGCCAGTCTTCAGTAGTCAATAATAATTCCCAATGTAGTCTATCTGTATAGATTATTTTAAATTTGTTCGTGTGAGCTTTTCCTTTTCTATTGCTATATTGATTAGTCCTGTAATCATGTCTGGGTTATGTGATCTCTCTAGCATCTTGTTTTTTACCATATTACTGAAAT]

[+] EMBL AK120202             [TAGTCTCGTTCCCCAGCACTCCGTCGTTGACGGGAGCCACCAAAACAGGCCCGAGCCCCTGCAGCGCCGGCCACCGGTCGCCTCCACGCCGGTGCAGTCGTGCCCTAGCCGCCCCGGTGGCCTATCCCTAGGAATCCAGGTCCAGTTCCGACTCGCGCGGCGTGGCTAGCATCCTCCGCGCGTCCCCGTTACATGTCCCTTGTGCGTGCCACACATCAGCAATAGCGACCTCACCATCACATTTTCACTTGGTGTTGGTGGATCTGTGCTTGGTGATCAAGACGGTCAAGACCCTAAGGCAGTCAAGTGCATATGACGGCAGTAGATAAGATGGTCGTTTTCGTTTGGTTCAATTAAGCAAGCATCAGGGCTGCATCGACGCTGTATCTACTGGATCCTAATCCTAAGCTTCCAGGTTTTTTTACCATTATGGTGCACTTGGTTGTTCATTTAGCCACTGAAGCAAAATTAGGAGGTCCTGTGTGTTACCGATATATGTATTTTGTGGAAAGGTATTTGAGTGTATTAAAGTCATATGTGCGTAATAAGGCACATCCTGAAGGATGTCTTGCAGAAGCATATTTGGCAGATGAGTGTATAACATTTTGTTCAAGATATCTTGAAGGTTTTGAGACAAAGCATAACCAGCCTACACGAAATGATGATGATGATGAGTCAGTTGCATGTTCAGATGATGAATGCACACCATATCTTTTTCCTCATGTTGGAAAACCACTTGGCAAGCCGAGAAGTTATGTTATTAGGGGCTTGACTAAAATGCAAGCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACCTTCGAACTCATGCTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAAGATTATCGAGCGTATCCAAAATGAAAAATTCCATGAATGGTTCAGAGCTCATATAATGGATCTAGAGAGGAAAAATGGCATATGCAGTGTCAAGAATGATCATAGATGGCTGGCTCGTGGTCCGATTGGTCCAGCAAAAAGATATCGTGCTTTCAATACCCGTGGCTTCCGGTTTAGGCCTAAACATTTGGATGGAGTGACACAGAATAGCGGAGTTGTCCTAAGTGCAAAAACATCCAGTTATACTAAATCAAGTGACACAAATCCAATATTGGGTGATCTAACATACTATGGTAGAGTCATCGATATTATTGAGCTAAATTACTCTGGACAATTTTCAGTAGTACTGTTTAAATGTGAATGGGTTGATGTTGTTTCTGGAAAAGGAGTTAAAAAAGATAAGTATGGTTACACACTAGTTAACTTCTCACATCTCATACATACTGGAGAAAAAGTTGAGCATGAGCCTTTTATTTTCCCCAATCAAGCAGATCAAGTTTATTATGTTGATGATCCAATGAATCCTGAGTGGTCTGTGGTAAGGAAGAACAAACCTAGAGATATATATGACATTGGTGAGGATGAATGGGCAGGTGACATAGAAATTGAGCCATTCCATGTTTCACACCTTGGTGGAATGTCCAGTAATGCAAACAATTACAAGCAATGGGTTAGAACAGATGTTGAAGGAACAACAGTAGATGTTGATAATAATGCTTTGAATAATGAAGGATAACAGAGGAAAATAGTTACTCTTTCATGATTTATTTCATTACTTCAAGTTTCAGGTCCATTATTTTGATGCAGACGCAGTTACATTGGCAAGGTGGCATCGGGGTGTTACTGTTTCTTTCGGCAAGCGAAAGTGAACAAGCAGCTGTCACTAAGCAACATATGGCAGTTCTAGTCCAAGCAAACATGAGTTTAGGCCAGTCTTCAGTAGTCAATAATAATTCCCAATGTAGTCTATCTGTATAGATTATTTTAAATTTGTTCGTGTGAGCTTTTCCTTTTCTATTGCTATATTGATTAGTCCTGTAATCATGTCTGGGTTATGTGATCTCTCTAGCATCTTGTTTTTTACCATATTACTGAAAT]
[-] EMBL CB642472             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCAGAAGCATATTTGGCAGATGAGTGTATGACATTTTGTTCAAGATATCTTGAAGGTTTTGAGACAAAGCATAACCAGCCTACACGAAATGATGATAATGATGAGTCAGTTGCATGTTCAGATGATGAATGCACACCATATCTTTTTCCTCATGTTGGAAAACCACTTGGCAAGCCGAGAAGTTATGTTATTAGGGGCTTGACTAAAATGCAAGCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACCTTCGAACTCATGTTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAAGATTATCGAGCGTATCCAAAATGAAAAATTCCATGAATGGTTCAGAGCTCATATAATGGATCTAGAGAGGAAAAATGGCATATGCAGTGTCAAGAATGATCATAGATGGCTGGCTCGTGGTCCGATTGGTCCAGCAAAAAGATATCGTGCTTTCAATACCCGTGGCTTCCGGTTTAGGCCTAAACATTTGGATGGAGTGACACAGAATAGCGGAGTTGTCCTAAGTGCAAAAACATCCAGTTATACTAAATCAAGTGACACAAATCCAATATTGGGTGATCTAACATACTATGGTAGAGTCATCGATATTATTGAGCTAAATTACTCTGGACAATTTTCAGTAGTACTGTTTAAATGTGAATGGGTTGATGTTGTTTCTGGAAAAGGAGTTAAAAAAGATAAGTATGGTTACACACTAGTTAACTTCTCACATCTCATAaaaaaaaag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]


>consensus_7565#0 TAGTCTCGTTCCCCAGCACTCCGTCGTTGACGGGAGCCACCAAAACAGGCCCGAGCCCCT GCAGCGCCGGCCACCGGTCGCCTCCACGCCGGTGCAGTCGTGCCCTAGCCGCCCCGGTGG CCTATCCCTAGGAATCCAGGTCCAGTTCCGACTCGCGCGGCGTGGCTAGCATCCTCCGCG CGTCCCCGTTACATGTCCCTTGTGCGTGCCACACATCAGCAATAGCGACCTCACCATCAC ATTTTCACTTGGTGTTGGTGGATCTGTGCTTGGTGATCAAGACGGTCAAGACCCTAAGGC AGTCAAGTGCATATGACGGCAGTAGATAAGATGGTCGTTTTCGTTTGGTTCAATTAAGCA AGCATCAGGGCTGCATCGACGCTGTATCTACTGGATCCTAATCCTAAGCTTCCAGGTTTT TTTACCATTATGGTGCACTTGGTTGTTCATTTAGCCACTGAAGCAAAATTAGGAGGTCCT GTGTGTTACCGATATATGTATTTTGTGGAAAGGTATTTGAGTGTATTAAAGTCATATGTG CGTAATAAGGCACATCCTGAAGGATGTCTTGCAGAAGCATATTTGGCAGATGAGTGTATA ACATTTTGTTCAAGATATCTTGAAGGTTTTGAGACAAAGCATAACCAGCCTACACGAAAT GATGATGATGATGAGTCAGTTGCATGTTCAGATGATGAATGCACACCATATCTTTTTCCT CATGTTGGAAAACCACTTGGCAAGCCGAGAAGTTATGTTATTAGGGGCTTGACTAAAATG CAAGCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACCTTCGAACTCAT GCTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAAGATTATCGAGCGT ATCCAAAATGAAAAATTCCATGAATGGTTCAGAGCTCATATAATGGATCTAGAGAGGAAA AATGGCATATGCAGTGTCAAGAATGATCATAGATGGCTGGCTCGTGGTCCGATTGGTCCA GCAAAAAGATATCGTGCTTTCAATACCCGTGGCTTCCGGTTTAGGCCTAAACATTTGGAT GGAGTGACACAGAATAGCGGAGTTGTCCTAAGTGCAAAAACATCCAGTTATACTAAATCA AGTGACACAAATCCAATATTGGGTGATCTAACATACTATGGTAGAGTCATCGATATTATT GAGCTAAATTACTCTGGACAATTTTCAGTAGTACTGTTTAAATGTGAATGGGTTGATGTT GTTTCTGGAAAAGGAGTTAAAAAAGATAAGTATGGTTACACACTAGTTAACTTCTCACAT CTCATACATACTGGAGAAAAAGTTGAGCATGAGCCTTTTATTTTCCCCAATCAAGCAGAT CAAGTTTATTATGTTGATGATCCAATGAATCCTGAGTGGTCTGTGGTAAGGAAGAACAAA CCTAGAGATATATATGACATTGGTGAGGATGAATGGGCAGGTGACATAGAAATTGAGCCA TTCCATGTTTCACACCTTGGTGGAATGTCCAGTAATGCAAACAATTACAAGCAATGGGTT AGAACAGATGTTGAAGGAACAACAGTAGATGTTGATAATAATGCTTTGAATAATGAAGGA TAACAGAGGAAAATAGTTACTCTTTCATGATTTATTTCATTACTTCAAGTTTCAGGTCCA TTATTTTGATGCAGACGCAGTTACATTGGCAAGGTGGCATCGGGGTGTTACTGTTTCTTT CGGCAAGCGAAAGTGAACAAGCAGCTGTCACTAAGCAACATATGGCAGTTCTAGTCCAAG CAAACATGAGTTTAGGCCAGTCTTCAGTAGTCAATAATAATTCCCAATGTAGTCTATCTG TATAGATTATTTTAAATTTGTTCGTGTGAGCTTTTCCTTTTCTATTGCTATATTGATTAG TCCTGTAATCATGTCTGGGTTATGTGATCTCTCTAGCATCTTGTTTTTTACCATATTACT GAAAT



consensusID : consensus_7565#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 773
fasta sequence
                              [TGACGAGAGCCACCAAAACAGGCCCGAGCCCCTGCAGCGCTGGCCACCGGTCGCCTCCACGCCGGTGCAGACGTGCCCTAGCCGCCCCGGTGGCCTATCCCTAGGAATCCAGGTCCAGTTCCGACTCGCGCGGTGTGGCTAGCATCCTCCGTGCGTCCCCGTTACATGTCCCTTGTGCGTGCCACACATCAGCAACAGCGACCTCACCATCACATTTTCACTTGGTGTTGGTGGATCTGTGCTTGGTGATCAAGACGGTCAAGACCCTAAGGCAGTCAAGTGCATATGACGGCAGCCAGTAGATAAGATGGTCGTTTTCGTTTGGTTCAATTAAACAAGCATCAGGGCTGCATCGACGCTGTATCTACTGGATCCTAATCCTAAGCTTCCAGGTATTTGAGTGTATTAAAGTCATATGTGCGTAATAAGGCACATCCTGAAGGATGTATTGCAGAAGCATATTTGGCAGATGAGTGTATGACATTTTGTTCAAGATATCTTGAAGGTTTTGAGACAAAGCATAACCAGCCTACACGAAATGATGATAATGATGAGTCAGTTGCATGTTCAGATGATGAATGCACACCATATCTTTTTCCTCATGTTGGAAAACCACTTGGCAAGCCGAGAAGTTATGTTATTAGGGGCTTGACTAAAATGCAAGCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACCTTCGAACTCATGTTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAAGATTAT]

[+] EMBL CB642471             [TGACGAGAGCCACCAAAACAGGCCCGAGCCCCTGCAGCGCTGGCCACCGGTCGCCTCCACGCCGGTGCAGACGTGCCCTAGCCGCCCCGGTGGCCTATCCCTAGGAATCCAGGTCCAGTTCCGACTCGCGCGGTGTGGCTAGCATCCTCCGTGCGTCCCCGTTACATGTCCCTTGTGCGTGCCACACATCAGCAACAGCGACCTCACCATCACATTTTCACTTGGTGTTGGTGGATCTGTGCTTGGTGATCAAGACGGTCAAGACCCTAAGGCAGTCAAGTGCATATGACGGCAGCCAGTAGATAAGATGGTCGTTTTCGTTTGGTTCAATTAAACAAGCATCAGGGCTGCATCGACGCTGTATCTACTGGATCCTAATCCTAAGCTTCCAGGTATTTGAGTGTATTAAAGTCATATGTGCGTAATAAGGCACATCCTGAAGGATGTATTGCAGAAGCATATTTGGCAGATGAGTGTATGACATTTTGTTCAAGATATCTTGAAGGTTTTGAGACAAAGCATAACCAGCCTACACGAAATGATGATAATGATGAGTCAGTTGCATGTTCAGATGATGAATGCACACCATATCTTTTTCCTCATGTTGGAAAACCACTTGGCAAGCCGAGAAGTTATGTTATTAGGGGCTTGACTAAAATGCAAGCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACCTTCGAACTCATGTTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAAGATTAT]


>consensus_7565#1 TGACGAGAGCCACCAAAACAGGCCCGAGCCCCTGCAGCGCTGGCCACCGGTCGCCTCCAC GCCGGTGCAGACGTGCCCTAGCCGCCCCGGTGGCCTATCCCTAGGAATCCAGGTCCAGTT CCGACTCGCGCGGTGTGGCTAGCATCCTCCGTGCGTCCCCGTTACATGTCCCTTGTGCGT GCCACACATCAGCAACAGCGACCTCACCATCACATTTTCACTTGGTGTTGGTGGATCTGT GCTTGGTGATCAAGACGGTCAAGACCCTAAGGCAGTCAAGTGCATATGACGGCAGCCAGT AGATAAGATGGTCGTTTTCGTTTGGTTCAATTAAACAAGCATCAGGGCTGCATCGACGCT GTATCTACTGGATCCTAATCCTAAGCTTCCAGGTATTTGAGTGTATTAAAGTCATATGTG CGTAATAAGGCACATCCTGAAGGATGTATTGCAGAAGCATATTTGGCAGATGAGTGTATG ACATTTTGTTCAAGATATCTTGAAGGTTTTGAGACAAAGCATAACCAGCCTACACGAAAT GATGATAATGATGAGTCAGTTGCATGTTCAGATGATGAATGCACACCATATCTTTTTCCT CATGTTGGAAAACCACTTGGCAAGCCGAGAAGTTATGTTATTAGGGGCTTGACTAAAATG CAAGCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACCTTCGAACTCAT GTTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAAGATTAT



consensusID : consensus_7565#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 750
fasta sequence
                              [AACAGTAGATGTTGATAATAATGCTTTGAATAATGAAGGATAACAGAGGAAAATAGTTACTCTTTCATGATTTATTTCATTACTTCAAGGTATATGCAATTACCTGATCTAAAACCTTTTGATGGATTTATTTTTGTTAGCAAAGGTGCTTCCAGTTTTAGAACTATCGAAAACTCTATCCAACTGAATGCATCTAAATCCAACAATATTTATGGTCTTTTAATTTAACTTTTCTGCCTTTTTGGTGTACGGTACAACTATTAGGTCCACTGGTTAAGTATGATCTTACATTATGTTCTTGTGAGAAATATGATTACAAGCGTAGTGGATGAATAATTTGTGGTTACCTTGGCTATTCTTTCTATTAAAAGATAGCAATAATCGTTGTGTTTATATTTATTTCTGATTGATTAAAACATGTTCATGCATGTTCATGTCCATTCTTTGCTCTATATTGTTTAGTTTCAGGTCCATTATTTTGATGCACACGCAGTTACATTGGCAAGGTGGCATCGGGGTGTTACTGTTTCTTTCGGCAAGCGAAAGTGAACAAGCAGCTGTCACTAAGCAACATATGGCAGTTCTAGTCCAAGCAAACATGAGTTTAGGCCAGTCTTCAGTAGTCAATAATAATTCCCAATGTAGTCTATCTGTATAGATTATTTTAAATTTGTTCGTGTGAGCTTTTCCTTTTCTATTGCTATATTGATTAGTCCTGTAATCATGTCTGGGTTATGTGATCTCTCTAGC]

[+] EMBL CB652726             [AACAGTAGATGTTGATAATAATGCTTTGAATAATGAAGGATAACAGAGGAAAATAGTTACTCTTTCATGATTTATTTCATTACTTCAAGGTATATGCAATTACCTGATCTAAAACCTTTTGATGGATTTATTTTTGTTAGCAAAGGTGCTTCCAGTTTTAGAACTATCGAAAACTCTATCCAACTGAATGCATCTAAATCCAACAATATTTATGGTCTTTTAATTTAACTTTTCTGCCTTTTTGGTGTACGGTACAACTATTAGGTCCACTGGTTAAGTATGATCTTACATTATGTTCTTGTGAGAAATATGATTACAAGCGTAGTGGATGAATAATTTGTGGTTACCTTGGCTATTCTTTCTATTAAAAGATAGCAATAATCGTTGTGTTTATATTTATTTCTGATTGATTAAAACATGTTCATGCATGTTCATGTCCATTCTTTGCTCTATATTGTTTAGTTTCAGGTCCATTATTTTGATGCACACGCAGTTACATTGGCAAGGTGGCATCGGGGTGTTACTGTTTCTTTCGGCAAGCGAAAGTGAACAAGCAGCTGTCACTAAGCAACATATGGCAGTTCTAGTCCAAGCAAACATGAGTTTAGGCCAGTCTTCAGTAGTCAATAATAATTCCCAATGTAGTCTATCTGTATAGATTATTTTAAATTTGTTCGTGTGAGCTTTTCCTTTTCTATTGCTATATTGATTAGTCCTGTAATCATGTCTGGGTTATGTGATCTCTCTAGC]


>consensus_7565#2 AACAGTAGATGTTGATAATAATGCTTTGAATAATGAAGGATAACAGAGGAAAATAGTTAC TCTTTCATGATTTATTTCATTACTTCAAGGTATATGCAATTACCTGATCTAAAACCTTTT GATGGATTTATTTTTGTTAGCAAAGGTGCTTCCAGTTTTAGAACTATCGAAAACTCTATC CAACTGAATGCATCTAAATCCAACAATATTTATGGTCTTTTAATTTAACTTTTCTGCCTT TTTGGTGTACGGTACAACTATTAGGTCCACTGGTTAAGTATGATCTTACATTATGTTCTT GTGAGAAATATGATTACAAGCGTAGTGGATGAATAATTTGTGGTTACCTTGGCTATTCTT TCTATTAAAAGATAGCAATAATCGTTGTGTTTATATTTATTTCTGATTGATTAAAACATG TTCATGCATGTTCATGTCCATTCTTTGCTCTATATTGTTTAGTTTCAGGTCCATTATTTT GATGCACACGCAGTTACATTGGCAAGGTGGCATCGGGGTGTTACTGTTTCTTTCGGCAAG CGAAAGTGAACAAGCAGCTGTCACTAAGCAACATATGGCAGTTCTAGTCCAAGCAAACAT GAGTTTAGGCCAGTCTTCAGTAGTCAATAATAATTCCCAATGTAGTCTATCTGTATAGAT TATTTTAAATTTGTTCGTGTGAGCTTTTCCTTTTCTATTGCTATATTGATTAGTCCTGTA ATCATGTCTGGGTTATGTGATCTCTCTAGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7565#0      TAGTCTCGTTCCCCAGCACTCCGTCGTTGACGGGAGCCACCAA-AACAG-GCCCGAGCCC 58
consensus_7565#1      ---------------------------TGACGAGAGCCACCAA-AACAG-GCCCGAGCCC 31
consensus_7565#2      ----------------------------AACAGTAGATGTTGATAATAATGCTTTGAATA 32
                                                   **   **      * ** *  **        

consensus_7565#0      CTGCAGCGCCGGCCACCGGTCGCCTCCACGCCGGTGCAGTCGTGCCCTAGCCGCCCCGGT 118
consensus_7565#1      CTGCAGCGCTGGCCACCGGTCGCCTCCACGCCGGTGCAGACGTGCCCTAGCCGCCCCGGT 91
consensus_7565#2      ATGAAG-GATAACAGAGGAAAATAGTTACTCTTTCAT-GATTTATTTCATTACTTCAAGG 90
                       ** ** *    *    *         ** *       *   *     *      *  * 

consensus_7565#0      GGCCTATCCCTAGG-AATCCAGGTCCAGTT--CCGACTCGCGCGGCGTGGCTAGCATCCT 175
consensus_7565#1      GGCCTATCCCTAGG-AATCCAGGTCCAGTT--CCGACTCGCGCGGTGTGGCTAGCATCCT 148
consensus_7565#2      TATATGCAATTACCTGATCTAAAACCTTTTGATGGATTTATTTTTGTTAGCAAAGGTGCT 150
                          *     **    *** *   **  **    ** *         * ** *   * **

consensus_7565#0      CCGCGCGTCCCCGTTACATGTCCCTTGTGCGTGCCACACATCAGCAATAGCGACCTCACC 235
consensus_7565#1      CCGTGCGTCCCCGTTACATGTCCCTTGTGCGTGCCACACATCAGCAACAGCGACCTCACC 208
consensus_7565#2      TCCAGTTTTAGAACTATCGAAAACTCTATCCAACTGAATGCATCTAAATCCAACAATATT 210
                       *  *  *      **       **    *   *   *       **   * **   *  

consensus_7565#0      -ATCACATTTTCACTTGGTGTTGGTGGATCTGTGCTTGGTGATCAAGACGGTCAAGACCC 294
consensus_7565#1      -ATCACATTTTCACTTGGTGTTGGTGGATCTGTGCTTGGTGATCAAGACGGTCAAGACCC 267
consensus_7565#2      TATGGTCTTTTAATTTAACTTTTCTGCCTTTTTGGTGTACGGT-ACAACTATTAGGTCCA 269
                       **    **** * **    **  **  * * ** *    * * *  **  * * * ** 

consensus_7565#0      TAAGGCAGTCAAGTGCATATGACGGCAG----TAGATAAGATGGTCGTTTTCGTTTGGTT 350
consensus_7565#1      TAAGGCAGTCAAGTGCATATGACGGCAGCCAGTAGATAAGATGGTCGTTTTCGTTTGGTT 327
consensus_7565#2      CTGGTTAAGTATGATCTTACATTATGTTCTTGTGAGAAATATGATTACAAGCGT--AGTG 327
                         *  *   * *  * **             *    ** *** *      ***   ** 

consensus_7565#0      CAATTAAGCAAGCATCAGGGCTGCATCGAC-GCTGTATCTACTGGATCCTAATCCTAAGC 409
consensus_7565#1      CAATTAAACAAGCATCAGGGCTGCATCGAC-GCTGTATCTACTGGATCCTAATCCTAAGC 386
consensus_7565#2      GA--TGAATAAT--TTGTGGTTACCTTGGCTATTCTTTCTATTAAAAGATAGCAATAATC 383
                       *  * *  **   *   ** * * * * *   * * **** *  *   **    *** *

consensus_7565#0      TTCCAGGTTTTTTTACCATTATGGTGCACTTGGTTGTTCATTTAGCCACTGAAGCAAAAT 469
consensus_7565#1      TTCCAGGT---------------------------------------------------- 394
consensus_7565#2      GTTGTGTTTATATTT--------------------------------------------- 398
                       *   * *                                                    

consensus_7565#0      TAGGAGGTCCTGTGTGTTACCGATATATGTATTTTGTGGAAAGGTATTTGAGTGTATTAA 529
consensus_7565#1      ---------------------------------------------ATTTGAGTGTATTAA 409
consensus_7565#2      -------------------------------------------ATTTCTGATTGATTAAA 415
                                                                    * *** **  * **

consensus_7565#0      AGTCATATGTGCGTAATAAGGCACATCCTGAAGGATGTCTTGCAGAAGCATATTTGGCAG 589
consensus_7565#1      AGTCATATGTGCGTAATAAGGCACATCCTGAAGGATGTATTGCAGAAGCATATTTGGCAG 469
consensus_7565#2      ACATGTTCATGCATGTTCATGTCCATTCTTTGCTCTATATTGTTTAG---TTTCAGGTCC 472
                      *    *   *** *  * * *  *** **      * * ***   *    * *  **   

consensus_7565#0      ATGAGTGTATAACATTTTGTTCAAGATATCTTGAAGGTTTTGAGACAAAGCATAACCAGC 649
consensus_7565#1      ATGAGTGTATGACATTTTGTTCAAGATATCTTGAAGGTTTTGAGACAAAGCATAACCAGC 529
consensus_7565#2      ATTATTTTGATGCACAC----GCAGTTACATTGGCAAGGTGGCATCGGGGTGTTACTGTT 528
                      ** * * *    **         ** **  ***      * *   *   *  * **    

consensus_7565#0      CTACACGAAATGATGATGATGATGAGTCAGTTGCATGTTCAGATGATGAATGCACACCAT 709
consensus_7565#1      CTACACGAAATGATGATAATGATGAGTCAGTTGCATGTTCAGATGATGAATGCACACCAT 589
consensus_7565#2      TCTTTCGGCA-AGCGAAAGTGAACAAGCAGCTG-----TCAC-TAAGCAACATATGGCA- 580
                           **  *    **   ***  *  *** **     ***  * *  **   *   ** 

consensus_7565#0      ATCTTTTTCCTCATGTTGGAAAACCACTTGGCAAGCCGAGAAGTTATGTTATTAGGGGCT 769
consensus_7565#1      ATCTTTTTCCTCATGTTGGAAAACCACTTGGCAAGCCGAGAAGTTATGTTATTAGGGGCT 649
consensus_7565#2      --GTTCTAGTCCAAGCAAACATGAGTTTAGGCCAGTCTTCAG--TAGTCAATAATAATTC 636
                         ** *    ** *     *      * *** ** *   *   **    ** *      

consensus_7565#0      TGACTAAAATGCAAGCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACC 829
consensus_7565#1      TGACTAAAATGCAAGCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACC 709
consensus_7565#2      CCAATGTAGTCTATCTGTATAGAT---TATTTTAAATTTGTTCG--TGTGAGCTTTTCCT 691
                        * *  * *  *     ******   *  * *  *  *** *   *** * *   * * 

consensus_7565#0      TTCGAACT--CATGCTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAA 887
consensus_7565#1      TTCGAACT--CATGTTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAA 767
consensus_7565#2      TTTCTATTGCTATATTGATTAGTCCTGTA-ATCATGTCTGGGTTATGTGATCTCTCTAGC 750
                      **   * *   **  **** **    * * * *** ** *         *** * * *  

consensus_7565#0      GATTATCGAGCGTATCCAAAATGAAAAATTCCATGAATGGTTCAGAGCTCATATAATGGA 947
consensus_7565#1      GATTAT------------------------------------------------------ 773
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      TCTAGAGAGGAAAAATGGCATATGCAGTGTCAAGAATGATCATAGATGGCTGGCTCGTGG 1007
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      TCCGATTGGTCCAGCAAAAAGATATCGTGCTTTCAATACCCGTGGCTTCCGGTTTAGGCC 1067
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      TAAACATTTGGATGGAGTGACACAGAATAGCGGAGTTGTCCTAAGTGCAAAAACATCCAG 1127
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      TTATACTAAATCAAGTGACACAAATCCAATATTGGGTGATCTAACATACTATGGTAGAGT 1187
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      CATCGATATTATTGAGCTAAATTACTCTGGACAATTTTCAGTAGTACTGTTTAAATGTGA 1247
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      ATGGGTTGATGTTGTTTCTGGAAAAGGAGTTAAAAAAGATAAGTATGGTTACACACTAGT 1307
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      TAACTTCTCACATCTCATACATACTGGAGAAAAAGTTGAGCATGAGCCTTTTATTTTCCC 1367
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      CAATCAAGCAGATCAAGTTTATTATGTTGATGATCCAATGAATCCTGAGTGGTCTGTGGT 1427
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      AAGGAAGAACAAACCTAGAGATATATATGACATTGGTGAGGATGAATGGGCAGGTGACAT 1487
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      AGAAATTGAGCCATTCCATGTTTCACACCTTGGTGGAATGTCCAGTAATGCAAACAATTA 1547
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      CAAGCAATGGGTTAGAACAGATGTTGAAGGAACAACAGTAGATGTTGATAATAATGCTTT 1607
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      GAATAATGAAGGATAACAGAGGAAAATAGTTACTCTTTCATGATTTATTTCATTACTTCA 1667
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      AGTTTCAGGTCCATTATTTTGATGCAGACGCAGTTACATTGGCAAGGTGGCATCGGGGTG 1727
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      TTACTGTTTCTTTCGGCAAGCGAAAGTGAACAAGCAGCTGTCACTAAGCAACATATGGCA 1787
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      GTTCTAGTCCAAGCAAACATGAGTTTAGGCCAGTCTTCAGTAGTCAATAATAATTCCCAA 1847
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      TGTAGTCTATCTGTATAGATTATTTTAAATTTGTTCGTGTGAGCTTTTCCTTTTCTATTG 1907
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      CTATATTGATTAGTCCTGTAATCATGTCTGGGTTATGTGATCTCTCTAGCATCTTGTTTT 1967
consensus_7565#1      ------------------------------------------------------------
consensus_7565#2      ------------------------------------------------------------
                                                                                  

consensus_7565#0      TTACCATATTACTGAAAT 1985
consensus_7565#1      ------------------
consensus_7565#2      ------------------
                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)