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Oryza sativa
cluster # 7588 cluster # 7588       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7588#0 length = 1607 sequences # 2  
consensus_7588#1 length = 837 sequences # 1  
consensus_7588#2 length = 695 sequences # 1  

consensusID : consensus_7588#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1607
fasta sequence
                              [CTTGTTGGGATGGATCGTCTCCTTTTTTTGGTCCTTGGGGATGACGCGTTCTCAGATTACATACAACTCCAAGTTCCAATCAATTTCTTAAAGAAAAGAAAAAGGAGGAAGAAGTGTTCAAACCGAAGCAAAACGGGAAGGAAAACCAACCAAATCCAAGAAGCTGCTTCTATGGCGACGGCGGCGGATGGCGTGGCGGTANCGAGGCAAGCGGA-NTCCGGCGGATCGAGGGCAACTCCTGCTTCAACAAGGCCCGCCTCGGCGCCGCCATCGACTGCTACACCGAGGCTATCGCTCTTTGCCCCGACGTNGCCGTCTACTGGCTCAACCGGGGCCTCTGCCATTTCAAGCGCAAGGAATGGGCTAAGGTCGAAGAGGATAGCAGGAGAGCTCTTGCCCTTGATGACACTCTGGTCAAGGTAACATCATCTCAATGTCCCTTGTTCATACATAAATCAAGTGATTGTTACAGGTCTTCAACTTTGGTCCAGGGTCACTATTTGCTGGGATGTGCCATGCTTGAGAAGGAACAATGTGCTCTTGCTATCAAGGAATTCAACAAGGCTTTGGATCTTCTTAAGTCTTCGAATTTGGGGGACAAAATGGCGGAGGACATTTGGCAGGTTCTTGCGAAGGCAAAATACCAAGATTGGGAAATACACTCCACTAAGAGAGTTTGGAAGATGCAAAGTTTAAAGTATGTTATGCATGAAAAATAATTGCAATAATAATGTTCCATAATTGTGTTGCAGATTAACTGTAGTGTGAATCTTGGGTATTGGTGGCCAATTTACTCCTATAACAACCTGGACACTCCCTTTATTATCTAAAATTTATGATGCTTTAAACTTTCTAACACCACTGTGTCACATGGACAATTAGGGAAGCATGTGAAAATGCTTTGCAGGAGCACCACTTTCTTAGTGGCACACTTGTGGGAGATGGCTCAACCAATGAGTATACAGACCAACTGAAATTGTTATCAGAAGTCTTCACCAAAGCTACAATCGACGATACACCAACAGATGTAATATTATTATCTATGTTATCTCATGTTCAACATCTTTGTGCTAGCATATTTTTTTTCTCTGTGATCTTAGGCTGTTGCTACCTGAAAATCTAGGTGCCTGACTACCTTTGCTGCCAAATAACCTTTGAGATTTTTAGAGATCCAGTGATCACACCCAGTGGTATAACGTATGAGAGGTCCATAATCCTTGAACATCTTTGCAAGGTGGGCAATTTCGACCCGGTGACACGAGAGCCTCTGAAAGAGCATCAATTGGTTCCTAACCTGGCTATAAAGGAAGCAGTCCAAGCCTACCTCAAGAATCACAGTTGGGCCTACAAGTTGAACTGATGATGTTGCTCTGTAGTTGCTTAGTGCTAACAACAGGTGTTGATAAAATGTTGGGTTGTCAAGGGGGAATTCTTTGCTTTTCTGATGTAATGTATAAGCAAGTTCATTCGTGCCCTCATGGAATTGATTGATTCTTGGGCAACTTCTGACGAACCTTGGACAATTGTACATAAAACATCATAGCAGAACCTTGGACGGTTTCAGACATACCGTGCCAAAATGACAATTCTCAGTGACAAATTATTCT]

[+] EMBL C26274               [CTTGTTGGGATGGATCGTCTCCTTTTTTTGGTCCTTGGGGATGACGCGTTCTCAGATTACATACAACTCCAAGTTCCAATCAATTTCTTAAAGAAAAGAAAAAGGAGGAAGAAGTGTTCAAACCGAAGCAAAACGGGAAGGAAAACCAACCAAATCCAAGAAGCTGCTTCTATGGCGACGGCGGCGGATGGCGTGGCGGTANCGAGGCAAGCGGA NTCCGGCGGATCGAGGGCAACTCCTGCTTCAACAAGGCCCGCCTCGGCGCCGCCATCGACTGCTACACCGAGGCTATCGCTCTTTGCCCCGACGTNGCCGTCTACTGGCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK069824             [                                                                                                                        AACCGAAGCAAAACGGGAAGGAAAACCAACCAAATCCAAGAAGCTGCTTCTATGGCGACGGCGGCGGATGGCGTGGCGGTAGCGAGGCAAGCGGAGCTCCGGCGGATCGAGGGCAACTCCTGCTTCAACAAGGCCCGCCTCGGCGCCGCCATCGACTGCTACACCGAGGCTATCGCTCTTTGCCCCGACGTCGCCGTCTACTGGCTCAACCGGGGCCTCTGCCATTTCAAGCGCAAGGAATGGGCTAAGGTCGAAGAGGATAGCAGGAGAGCTCTTGCCCTTGATGACACTCTGGTCAAGGTAACATCATCTCAATGTCCCTTGTTCATACATAAATCAAGTGATTGTTACAGGTCTTCAACTTTGGTCCAGGGTCACTATTTGCTGGGATGTGCCATGCTTGAGAAGGAACAATGTGCTCTTGCTATCAAGGAATTCAACAAGGCTTTGGATCTTCTTAAGTCTTCGAATTTGGGGGACAAAATGGCGGAGGACATTTGGCAGGTTCTTGCGAAGGCAAAATACCAAGATTGGGAAATACACTCCACTAAGAGAGTTTGGAAGATGCAAAGTTTAAAGTATGTTATGCATGAAAAATAATTGCAATAATAATGTTCCATAATTGTGTTGCAGATTAACTGTAGTGTGAATCTTGGGTATTGGTGGCCAATTTACTCCTATAACAACCTGGACACTCCCTTTATTATCTAAAATTTATGATGCTTTAAACTTTCTAACACCACTGTGTCACATGGACAATTAGGGAAGCATGTGAAAATGCTTTGCAGGAGCACCACTTTCTTAGTGGCACACTTGTGGGAGATGGCTCAACCAATGAGTATACAGACCAACTGAAATTGTTATCAGAAGTCTTCACCAAAGCTACAATCGACGATACACCAACAGATGTAATATTATTATCTATGTTATCTCATGTTCAACATCTTTGTGCTAGCATATTTTTTTTCTCTGTGATCTTAGGCTGTTGCTACCTGAAAATCTAGGTGCCTGACTACCTTTGCTGCCAAATAACCTTTGAGATTTTTAGAGATCCAGTGATCACACCCAGTGGTATAACGTATGAGAGGTCCATAATCCTTGAACATCTTTGCAAGGTGGGCAATTTCGACCCGGTGACACGAGAGCCTCTGAAAGAGCATCAATTGGTTCCTAACCTGGCTATAAAGGAAGCAGTCCAAGCCTACCTCAAGAATCACAGTTGGGCCTACAAGTTGAACTGATGATGTTGCTCTGTAGTTGCTTAGTGCTAACAACAGGTGTTGATAAAATGTTGGGTTGTCAAGGGGGAATTCTTTGCTTTTCTGATGTAATGTATAAGCAAGTTCATTCGTGCCCTCATGGAATTGATTGATTCTTGGGCAACTTCTGACGAACCTTGGACAATTGTACATAAAACATCATAGCAGAACCTTGGACGGTTTCAGACATACCGTGCCAAAATGACAATTCTCAGTGACAAATTATTCT]


>consensus_7588#0 CTTGTTGGGATGGATCGTCTCCTTTTTTTGGTCCTTGGGGATGACGCGTTCTCAGATTAC ATACAACTCCAAGTTCCAATCAATTTCTTAAAGAAAAGAAAAAGGAGGAAGAAGTGTTCA AACCGAAGCAAAACGGGAAGGAAAACCAACCAAATCCAAGAAGCTGCTTCTATGGCGACG GCGGCGGATGGCGTGGCGGTANCGAGGCAAGCGGANTCCGGCGGATCGAGGGCAACTCCT GCTTCAACAAGGCCCGCCTCGGCGCCGCCATCGACTGCTACACCGAGGCTATCGCTCTTT GCCCCGACGTNGCCGTCTACTGGCTCAACCGGGGCCTCTGCCATTTCAAGCGCAAGGAAT GGGCTAAGGTCGAAGAGGATAGCAGGAGAGCTCTTGCCCTTGATGACACTCTGGTCAAGG TAACATCATCTCAATGTCCCTTGTTCATACATAAATCAAGTGATTGTTACAGGTCTTCAA CTTTGGTCCAGGGTCACTATTTGCTGGGATGTGCCATGCTTGAGAAGGAACAATGTGCTC TTGCTATCAAGGAATTCAACAAGGCTTTGGATCTTCTTAAGTCTTCGAATTTGGGGGACA AAATGGCGGAGGACATTTGGCAGGTTCTTGCGAAGGCAAAATACCAAGATTGGGAAATAC ACTCCACTAAGAGAGTTTGGAAGATGCAAAGTTTAAAGTATGTTATGCATGAAAAATAAT TGCAATAATAATGTTCCATAATTGTGTTGCAGATTAACTGTAGTGTGAATCTTGGGTATT GGTGGCCAATTTACTCCTATAACAACCTGGACACTCCCTTTATTATCTAAAATTTATGAT GCTTTAAACTTTCTAACACCACTGTGTCACATGGACAATTAGGGAAGCATGTGAAAATGC TTTGCAGGAGCACCACTTTCTTAGTGGCACACTTGTGGGAGATGGCTCAACCAATGAGTA TACAGACCAACTGAAATTGTTATCAGAAGTCTTCACCAAAGCTACAATCGACGATACACC AACAGATGTAATATTATTATCTATGTTATCTCATGTTCAACATCTTTGTGCTAGCATATT TTTTTTCTCTGTGATCTTAGGCTGTTGCTACCTGAAAATCTAGGTGCCTGACTACCTTTG CTGCCAAATAACCTTTGAGATTTTTAGAGATCCAGTGATCACACCCAGTGGTATAACGTA TGAGAGGTCCATAATCCTTGAACATCTTTGCAAGGTGGGCAATTTCGACCCGGTGACACG AGAGCCTCTGAAAGAGCATCAATTGGTTCCTAACCTGGCTATAAAGGAAGCAGTCCAAGC CTACCTCAAGAATCACAGTTGGGCCTACAAGTTGAACTGATGATGTTGCTCTGTAGTTGC TTAGTGCTAACAACAGGTGTTGATAAAATGTTGGGTTGTCAAGGGGGAATTCTTTGCTTT TCTGATGTAATGTATAAGCAAGTTCATTCGTGCCCTCATGGAATTGATTGATTCTTGGGC AACTTCTGACGAACCTTGGACAATTGTACATAAAACATCATAGCAGAACCTTGGACGGTT TCAGACATACCGTGCCAAAATGACAATTCTCAGTGACAAATTATTCT



consensusID : consensus_7588#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 837
fasta sequence
                              [CATGCTCTTTAAGGAACAATGTGCTCTTGCTATCAAGGAATTCAACAAGGCTTTGGATCTTCTTAAGTCTTCGAATTTGGGGGACAAAATGGCGGAGGACATTTGGCAGGTTCTTGCGAAGGCAAAATACCAAAATTGGGAAATACACTCCACTAAGAGAGTTTGGAAGATGCAAAGTTTAAAGTATGTTATGCATGAAAAATAATTGCAATAATAATGTTCCATAATTGTGTTGCAGATTAACTGTAGTGTGAATCTTGGGTATTGGTGGCCAATTTACTCCTATAACAACCTGGACACTCCCTTTATTATCTAAAATTTATGATGCTTTAAACTTTCTAACACCACTGTGTCACATGGACAATTAGGGAAGCATGTGAAAATGCTTTGCAGGAGCACCACTTTCTTAGTGGCACACTTGTGGGAGATGGCTCAACCAATGAGTATACAGACCAACTGAAATTGTTATCAGAAGTCTTCACCAAAGCTACAATCGACGATACACCAACAGATGTAATATTATTATCTATGTTATCTCATGTTCAACATCTTTGTGCTAGCATATTTTTTTTCTCTGTGATCTTAGGCTGTTGCTACCTGAAAATCTAGGTGCCTGACTACCTTTGCTGCCAAATAACCTTTGAGATTTTTAGAGATCCAGTGATCACACCCAGTGGTATAACGTATGAGAGGTCCATAATCCTTGAACATCTTTGCAAGGTACACCTCCCTTGCTAATTTGCTATCTGTTTTTCAGAAGGTTTTTGGCTCTGCATATCTTTAGATGTTGTTGCTAATATTTCACTAGAAGGACCATGTATTAGCTGGCTACATCTA]

[+] EMBL CB679740             [CATGCTCTTTAAGGAACAATGTGCTCTTGCTATCAAGGAATTCAACAAGGCTTTGGATCTTCTTAAGTCTTCGAATTTGGGGGACAAAATGGCGGAGGACATTTGGCAGGTTCTTGCGAAGGCAAAATACCAAAATTGGGAAATACACTCCACTAAGAGAGTTTGGAAGATGCAAAGTTTAAAGTATGTTATGCATGAAAAATAATTGCAATAATAATGTTCCATAATTGTGTTGCAGATTAACTGTAGTGTGAATCTTGGGTATTGGTGGCCAATTTACTCCTATAACAACCTGGACACTCCCTTTATTATCTAAAATTTATGATGCTTTAAACTTTCTAACACCACTGTGTCACATGGACAATTAGGGAAGCATGTGAAAATGCTTTGCAGGAGCACCACTTTCTTAGTGGCACACTTGTGGGAGATGGCTCAACCAATGAGTATACAGACCAACTGAAATTGTTATCAGAAGTCTTCACCAAAGCTACAATCGACGATACACCAACAGATGTAATATTATTATCTATGTTATCTCATGTTCAACATCTTTGTGCTAGCATATTTTTTTTCTCTGTGATCTTAGGCTGTTGCTACCTGAAAATCTAGGTGCCTGACTACCTTTGCTGCCAAATAACCTTTGAGATTTTTAGAGATCCAGTGATCACACCCAGTGGTATAACGTATGAGAGGTCCATAATCCTTGAACATCTTTGCAAGGTACACCTCCCTTGCTAATTTGCTATCTGTTTTTCAGAAGGTTTTTGGCTCTGCATATCTTTAGATGTTGTTGCTAATATTTCACTAGAAGGACCATGTATTAGCTGGCTACATCTA]


>consensus_7588#1 CATGCTCTTTAAGGAACAATGTGCTCTTGCTATCAAGGAATTCAACAAGGCTTTGGATCT TCTTAAGTCTTCGAATTTGGGGGACAAAATGGCGGAGGACATTTGGCAGGTTCTTGCGAA GGCAAAATACCAAAATTGGGAAATACACTCCACTAAGAGAGTTTGGAAGATGCAAAGTTT AAAGTATGTTATGCATGAAAAATAATTGCAATAATAATGTTCCATAATTGTGTTGCAGAT TAACTGTAGTGTGAATCTTGGGTATTGGTGGCCAATTTACTCCTATAACAACCTGGACAC TCCCTTTATTATCTAAAATTTATGATGCTTTAAACTTTCTAACACCACTGTGTCACATGG ACAATTAGGGAAGCATGTGAAAATGCTTTGCAGGAGCACCACTTTCTTAGTGGCACACTT GTGGGAGATGGCTCAACCAATGAGTATACAGACCAACTGAAATTGTTATCAGAAGTCTTC ACCAAAGCTACAATCGACGATACACCAACAGATGTAATATTATTATCTATGTTATCTCAT GTTCAACATCTTTGTGCTAGCATATTTTTTTTCTCTGTGATCTTAGGCTGTTGCTACCTG AAAATCTAGGTGCCTGACTACCTTTGCTGCCAAATAACCTTTGAGATTTTTAGAGATCCA GTGATCACACCCAGTGGTATAACGTATGAGAGGTCCATAATCCTTGAACATCTTTGCAAG GTACACCTCCCTTGCTAATTTGCTATCTGTTTTTCAGAAGGTTTTTGGCTCTGCATATCT TTAGATGTTGTTGCTAATATTTCACTAGAAGGACCATGTATTAGCTGGCTACATCTA



consensusID : consensus_7588#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 695
fasta sequence
                              [TCCNACTTAAGGAGAGTTTGGNAAGATGCCAAGTTTTAAAGGAAGCATTTGAAAATGCTTTGCAGGAGCACCACTTTCTTAAGTGGCACACTTGTGGGAGATGGCTCAACCCAATGGAGTATACAGACCAACTGAAATTGTTATCCAGAAGTCTTCACCCAAAGCTACAATCGACGATACACCAACAGATGTGCCCTGACTACCTTTGCTGCCAAATAACCTTTGAGATTTTTAGAGATCCCAGTGATCACACCCAGTGGTATAACGTATGAGAGGTCCATAATCCTTGAACATCTTTGCAAGGTGGGCAATTTCGACCCGGTGACACGAGAGCCTCTGAAAGAGCATCAATTGGTTCCTAACCTGGCTATAAAGGAAGCAGTCCAAGCCTACCTCAAGAATCACAGTTGGGCCTACAAGTTGAACTGATGATGTTGCTCTGTAGTTGCTTAGTGCTAACAACAGGTGTTGATAAAATGTTGGGTTGTCAAGGGGGAATTCTTTGCTTTTCTGATGTAATGTATAAGCAAGTTCATTCGTGCCCTCATGGAATTGATTGATTCTTGGGCAACTTCTGACGAACCTTGGACAATTGTACATAAAACATCATAGCAGAACCTTGGACGGTTTCAGACATACCGTGCCAAAATGACAATTCTCAGTGACAAATTATTCTTTTGTTCGGTAAAAAAAAA]

[+] EMBL AU100682             [TCCNACTTAAGGAGAGTTTGGNAAGATGCCAAGTTTTAAAGGAAGCATTTGAAAATGCTTTGCAGGAGCACCACTTTCTTAAGTGGCACACTTGTGGGAGATGGCTCAACCCAATGGAGTATACAGACCAACTGAAATTGTTATCCAGAAGTCTTCACCCAAAGCTACAATCGACGATACACCAACAGATGTGCCCTGACTACCTTTGCTGCCAAATAACCTTTGAGATTTTTAGAGATCCCAGTGATCACACCCAGTGGTATAACGTATGAGAGGTCCATAATCCTTGAACATCTTTGCAAGGTGGGCAATTTCGACCCGGTGACACGAGAGCCTCTGAAAGAGCATCAATTGGTTCCTAACCTGGCTATAAAGGAAGCAGTCCAAGCCTACCTCAAGAATCACAGTTGGGCCTACAAGTTGAACTGATGATGTTGCTCTGTAGTTGCTTAGTGCTAACAACAGGTGTTGATAAAATGTTGGGTTGTCAAGGGGGAATTCTTTGCTTTTCTGATGTAATGTATAAGCAAGTTCATTCGTGCCCTCATGGAATTGATTGATTCTTGGGCAACTTCTGACGAACCTTGGACAATTGTACATAAAACATCATAGCAGAACCTTGGACGGTTTCAGACATACCGTGCCAAAATGACAATTCTCAGTGACAAATTATTCTTTTGTTCGGTAAAAAAAAA]


>consensus_7588#2 TCCNACTTAAGGAGAGTTTGGNAAGATGCCAAGTTTTAAAGGAAGCATTTGAAAATGCTT TGCAGGAGCACCACTTTCTTAAGTGGCACACTTGTGGGAGATGGCTCAACCCAATGGAGT ATACAGACCAACTGAAATTGTTATCCAGAAGTCTTCACCCAAAGCTACAATCGACGATAC ACCAACAGATGTGCCCTGACTACCTTTGCTGCCAAATAACCTTTGAGATTTTTAGAGATC CCAGTGATCACACCCAGTGGTATAACGTATGAGAGGTCCATAATCCTTGAACATCTTTGC AAGGTGGGCAATTTCGACCCGGTGACACGAGAGCCTCTGAAAGAGCATCAATTGGTTCCT AACCTGGCTATAAAGGAAGCAGTCCAAGCCTACCTCAAGAATCACAGTTGGGCCTACAAG TTGAACTGATGATGTTGCTCTGTAGTTGCTTAGTGCTAACAACAGGTGTTGATAAAATGT TGGGTTGTCAAGGGGGAATTCTTTGCTTTTCTGATGTAATGTATAAGCAAGTTCATTCGT GCCCTCATGGAATTGATTGATTCTTGGGCAACTTCTGACGAACCTTGGACAATTGTACAT AAAACATCATAGCAGAACCTTGGACGGTTTCAGACATACCGTGCCAAAATGACAATTCTC AGTGACAAATTATTCTTTTGTTCGGTAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7588#0      CTTGTTGGGATGGATCGTCTCCTTTTTTTGGTCCTTGGGGATGACGCGTTCTCAGATTAC 60
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      ATACAACTCCAAGTTCCAATCAATTTCTTAAAGAAAAGAAAAAGGAGGAAGAAGTGTTCA 120
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      AACCGAAGCAAAACGGGAAGGAAAACCAACCAAATCCAAGAAGCTGCTTCTATGGCGACG 180
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      GCGGCGGATGGCGTGGCGGTANCGAGGCAAGCGGANTCCGGCGGATCGAGGGCAACTCCT 240
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      GCTTCAACAAGGCCCGCCTCGGCGCCGCCATCGACTGCTACACCGAGGCTATCGCTCTTT 300
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      GCCCCGACGTNGCCGTCTACTGGCTCAACCGGGGCCTCTGCCATTTCAAGCGCAAGGAAT 360
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      GGGCTAAGGTCGAAGAGGATAGCAGGAGAGCTCTTGCCCTTGATGACACTCTGGTCAAGG 420
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      TAACATCATCTCAATGTCCCTTGTTCATACATAAATCAAGTGATTGTTACAGGTCTTCAA 480
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      CTTTGGTCCAGGGTCACTATTTGCTGGGATGTGCCATGCTTGAGAAGGAACAATGTGCTC 540
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      TTGCTATCAAGGAATTCAACAAGGCTTTGGATCTTCTTAAGTCTTCGAATTTGGGGGACA 600
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      AAATGGCGGAGGACATTTGGCAGGTTCTTGCGAAGGCAAAATACCAAGATTGGGAAATAC 660
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      ACTCCACTAAGAGAGTTTGGAAGATGCAAAGTTTAAAGTATGTTATGCATGAAAAATAAT 720
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      TGCAATAATAATGTTCCATAATTGTGTTGCAGATTAACTGTAGTGTGAATCTTGGGTATT 780
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      GGTGGCCAATTTACTCCTATAACAACCTGGACACTCCCTTTATTATCTAAAATTTATGAT 840
consensus_7588#2      ------------------------------------------------------------
consensus_7588#1      ------------------------------------------------------------
                                                                                  

consensus_7588#0      GCTTTAAACTTTCTAAC-ACCACTGTGT-CACATGGACAATTAG-GGAAGCATGTGAAAA 897
consensus_7588#2      ---TCCNACTTAAGGAG-AGTTTGGNAA-GATGCCAAGTTTTAAAGGAAGCATTTGAAAA 55
consensus_7588#1      -CATGCTCTTTAAGGAACAATGTGCTCTTGCTATCAAGGAATTCAACAAGGCTTTGGATC 59
                         *     **    *  *                 *    *     ***  * ** *  

consensus_7588#0      TGCTTTGCAGGAGCACCACTTTCTTA-GTGGCACACTTGTGGGAGATGGCTCAACC-AAT 955
consensus_7588#2      TGCTTTGCAGGAGCACCACTTTCTTAAGTGGCACACTTGTGGGAGATGGCTCAACCCAAT 115
consensus_7588#1      TTCTT------AAGTCTTCGAATTTGGGGGACAAAATGGCGGAGGACA-TTTGGCAGGTT 112
                      * ***      *   *  *    **  * * ** * * * **  **    *   *    *

consensus_7588#0      G-AGTATACAGACCAACTGAAATTGTTATC-AGAAGTCTTCACC-AAAGCTACAATCGAC 1012
consensus_7588#2      GGAGTATACAGACCAACTGAAATTGTTATCCAGAAGTCTTCACCCAAAGCTACAATCGAC 175
consensus_7588#1      C--TTGCGAAGGCAAAATACCAAAATTGGGAAATACACTCCACT--AAGAGAGTTTGGAA 168
                          *    ** * ** *   *   **    *  *  ** ***   ***  *   * ** 

consensus_7588#0      GATACACCAACAGATGTAATATTATTATCTATGTTATCTCATGTTCAACATCTTTGTGCT 1072
consensus_7588#2      GATACACCAACAGATGTGC----------------------------------------- 194
consensus_7588#1      GATGCAAAGTTTAAAGTATGTTATGCATGAAAAATAATTGCAATAATAATGTTCCATAAT 228
                      *** **       * **                                           

consensus_7588#0      AGCATATTTTTTTTCTCTGTGATCTTAGGCTGTTGCTACCTGAAAATCTAGGTGCC-TGA 1131
consensus_7588#2      ------------------------------------------------------CC-TGA 199
consensus_7588#1      TGTGTTGCAGATTAACTGTAGTGTGAATCTTGGGTATTGGTGGCCAATTTACTCCTATAA 288
                                                                            *  * *

consensus_7588#0      CTACCTTTGC-TGCCAAATAACCTTTGAGATTTTTAGAGATCC-AGTGATCACACCCAGT 1189
consensus_7588#2      CTACCTTTGC-TGCCAAATAACCTTTGAGATTTTTAGAGATCCCAGTGATCACACCCAGT 258
consensus_7588#1      CAACCTGGACACTCCCTTTATTATCTAAAATTTATGATGCTTTAAACTTTCTAACACCAC 348
                      * ****   *   **   **   * * * **** *   * *   *    **  ** *   

consensus_7588#0      GGTATAACGTATGAGAGGTCCATAATCCT-TGAACAT-CTTTGCAAGGTGGGCAATTTCG 1247
consensus_7588#2      GGTATAACGTATGAGAGGTCCATAATCCT-TGAACAT-CTTTGCAAGGTGGGCAATTTCG 316
consensus_7588#1      TGTGTCACATG-GACAATTAGGGAAGCATGTGAAAATGCTTTGCAGGAGCACCACTTT-- 405
                       ** * ** *  ** *  *    ** * * **** ** ******* *     ** ***  

consensus_7588#0      ACCCGGTGACACGAGAGCCTCTGAAAGA-GCATCAATTGGTTCCTAACCTGGCTA--TAA 1304
consensus_7588#2      ACCCGGTGACACGAGAGCCTCTGAAAGA-GCATCAATTGGTTCCTAACCTGGCTA--TAA 373
consensus_7588#1      -CTTAGTGGCACA----CTTGTGGGAGATGGCTCAACCAATGAGTATACAGACCAACTGA 460
                       *   *** ***     * * **  *** *  ****    *   **  * * * *  * *

consensus_7588#0      AGGAAGCAGTCCAAGCCTACCTCAAGAATCACAGTTGGGCCTACAAGTTGAACTGATGAT 1364
consensus_7588#2      AGGAAGCAGTCCAAGCCTACCTCAAGAATCACAGTTGGGCCTACAAGTTGAACTGATGAT 433
consensus_7588#1      AATTGTTATCAGAAGTCTTCACCAA-AGCTACAATCGACGATACACCAACAGATG-TAAT 518
                      *      *    *** ** *  *** *   *** * *    ****     *  ** * **

consensus_7588#0      GTTGCTCTGTA-GTTGCTTAGTGCTAACAACAGGTGT-TGATAAAATGTTGGGTTGTCAA 1422
consensus_7588#2      GTTGCTCTGTA-GTTGCTTAGTGCTAACAACAGGTGT-TGATAAAATGTTGGGTTGTCAA 491
consensus_7588#1      ATTATTATCTATGTTATCTCATGTT--CAACATCTTTGTGCTAGCATATTTTTTTTCTCT 576
                       **  * * ** ***   *  ** *  *****  * * ** **  ** **   **     

consensus_7588#0      GGGGGAATTCTTTGCTTTTCTGATGTAATGTATAAGCAAGTTCATTCGTGCCCTCATGGA 1482
consensus_7588#2      GGGGGAATTCTTTGCTTTTCTGATGTAATGTATAAGCAAGTTCATTCGTGCCCTCATGGA 551
consensus_7588#1      GTGATCTTAGGCTGTTGCTACCTGAAAATCTAGGTGCCTGACTACCTTTGCTGCCAAATA 636
                      * *    *    ** *  *       *** **   **  *   *    ***   **   *

consensus_7588#0      ATTGATT-GATTCTTGGGCAACTTCTGACGA-ACCTTGGACAATTGTACATAAAA----C 1536
consensus_7588#2      ATTGATT-GATTCTTGGGCAACTTCTGACGA-ACCTTGGACAATTGTACATAAAA----C 605
consensus_7588#1      ACCTTTGAGATTTTTAGAGATCCAGTGATCACACCCAGTGGTATAACGTATGAGAGGTCC 696
                      *    *  **** ** *  * *   ***  * ***  *    **     ** * *    *

consensus_7588#0      ATCATAGCAGAACCTTGGACGGTTTCAGACATACCGTGCCAAAATGACAATTCTCAGTGA 1596
consensus_7588#2      ATCATAGCAGAACCTTGGACGGTTTCAGACATACCGTGCCAAAATGACAATTCTCAGTGA 665
consensus_7588#1      ATAATCCTTGAACATCTTTGCAAGGTACACCTCCCTTGCTAATTTGCTATCTGTTTTTCA 756
                      ** **    **** *           * ** * ** *** **  **  *  * *   * *

consensus_7588#0      CAAATTATTC--T----------------------------------------------- 1607
consensus_7588#2      CAAATTATTC--TTTTGTTCGGTAAAAAAAAA---------------------------- 695
consensus_7588#1      GAAGGTTTTTGGCTCTGCATATCTTTAGATGTTGTTGCTAATATTTCACTAGAAGGACCA 816
                       **  * **                                                   

consensus_7588#0      ---------------------
consensus_7588#2      ---------------------
consensus_7588#1      TGTATTAGCTGGCTACATCTA 837
                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)