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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7603#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1006 fasta sequence
[GAAGGAGTAGAAAATCATCCCTCGTTGTCGTTTTAAACAACTTGATCAGGTGATCAATCAAATCAATAGAAACGATGGCTGCAGGCTTGCAAGTGTTTGGCCAGCCAGCATCTACTGATGTTGCCAGGGTCCTGACATGCCTCTTTGAGAAGGATCTGGAATTTGAACTTGTCTGCATTGATACATTCAAGAGAGAGCACAAGCTTCCTGAGTTCATTAAGCTGCGGGATCCTAATGGGCAAGTGACATTTAAACATGGTGACAAAACCATCGTCGATTCAAGGGCTATATGCCGGTACGTTTGTACTCAGTTTCCAGAGGGAAATAAGACCCTTTATGGAAC-GGGATCTCTAGAACGGGCATCAATAGAACAGTGGCTTCAAGCAGAAGCTCAAAATTTCAGCCCTCCCAGCTCGGCCCTCGTCTTCCATCTCGCATTTGCTCCCCATCTGAACATTCCCCAGGACCATGCTGTTATTGCAGAAAATGAGAAGAAACTTCAGCAAGTCCTCAATGTTTATGATGAGATACTCTCAAAGAATGAGTACCTGGCTGGTGATGAGTTCACCCTGGCTGACCTTTCTCACCTTCCAAACTCACATTACATTGTGAGTTCTGAGAGAGGAAGGAAGCTCTTCACTGGCAGGAAGAATGTGGCAAGGTGGTACGACCAAATCTCAAAGCGCGAGACATGGAAGCAGGTGGTCAAGATGCAGAGGGAGCATCCGGGTGCATTCGAGTAATGGCCTGATATATTGCCCAAGTTCA-TCGTGTCCGTTGTCGATCGATCTGGCTTCTGCTGTCCTGTGTT-GTCATCGTCGCTAGT-TTGCC-TGTCCCCTGCTTATATTGTCGTGTGACCAAATAATATGAAGCCTCTTCTTGTTGTGACGTAGT-TTCATACCATGTACCTCGTTGCTTTACAGGTCATTTGTTTTCTCCCTTGTTTAGTGATTAAATAAAATTGTTAATCGACCTGGCAGNTCTAAATCTGGTGGTTTCTTCGCCT]
[+] EMBL CF312867 [GAAGGAGTAGAAAATCATCCCTCGTTGTCGTTTTAAACAACTTGATCAGGTGATCAATCAAATCAATAGAAACGATGGCTGCAGGCTTGCAAGTGTTTGGCCAGCCAGCATCTACTGATGTTGCCAGGGTCCTGACATGCCTCTTTGAGAAGGATCTGGAATTTGAACTTGTCTGCATTGATACATTCAAGAGAGAGCACAAGCTTCCTGAGTTCATTAAGCTGCGGGATCCTAATGGGCAAGTGACATTTAAACATGGTGACAAAACCATCGTCGATTCAAGGGCTATATGCCGGTACGTTTGTACTCAGTTTCCAGAGGGAAATAAGACCCTTTATGGAACNGGGATCTCTAGAACGGGCATCAATAGAACAGTGGCTTCAAGCAGAAGCTCAAAATTTCAGCCCTCCCAGCTCGGCCCTCGTCTTCCATCTCGCATTTGCTCCCCATCTGAACATTCCCCAGGACCATGCTGTTATTGCAGAAAATGAGAAGAAACTTCAGCAAGTCCTCAATGTTTATGATGAGATACTCT ]
[+] EMBL CA766885 [ GGTACGTTTGTACTCAGTTTCCAGAGGGAAATAAGACCCTTTATGGAAC GGGATCTCTAGAACGGGCATCAATAGAACAGTGGCTTCAAGCAGAAGCTCAAAATTTCAGCCCTCCCAGCTCGGCCCTCGTCTTCCATCTCGCATTTGCTCCCCATCTGAACATTCCCCAGGACCATGCTGTTATTGCAGAAAATGAGAAGAAACTTCAGCAAGTCCTCAATGTTTATGATGAGATACTCTCAAAGAATGAGTACCTGGCTGGTGATGAGTTCACCCTGGCTGACCTTTCTCACCTTCCAAACTCACATTACATTGTGAGTTCTGAGAGAGGAAGGAAGCTCTTCACTGGCAGGAAGAATGCGGCAAGGTGGTACGACCAAATCTCAAAGCGCGAGACATGGAAGCAGGTGGTCAAGATGCAGAGGGAGCATCCGGGTGCATTCGAGTAATGGCCTGATATATTGCCCAAGTTCA TCGTGTCCGTTGTCGATCGATCTGGCTTCTGCTGTCCTGTGTT GTCATCGTCGCTAGT TTGCC TGTCCCCTGCTTATATTGTCGTGTGACCAAATAATATGAAGCCTCTTCTTGNTGTGACGTAGT TTCATACCATGTACCTCGNTGCTTTACAGGTCATTTGGTTTCTCCCTTGGTTAGTGATTAAATAAAATTGGTAATCGACCTGGCAGNTCTAAATCTGGTGGTTTCTTCGCCT]
[+] EMBL AK059226 [ TCAATAGAACAGTGGCTTCAAGCAGAAGCTCAAAATTTCAGCCCTCCCAGCTCGGCCCTCGTCTTCCATCTCGCATTTGCTCCCCATCTGAACATTCCCCAGGACCATGCTGTTATTGCAGAAAATGAGAAGAAACTTCAGCAAGTCCTCAATGTTTATGATGAGATACTCTCAAAGAATGAGTACCTGGCTGGTGATGAGTTCACCCTGGCTGACCTTTCTCACCTTCCAAACTCACATTACATTGTGAGTTCTGAGAGAGGAAGGAAGCTCTTCACTGGCAGGAAGAATGTGGCAAGGTGGTACGACCAAATCTCAAAGCGCGAGACATGGAAGCAGGTGGTCAAGATGCAGAGGGAGCATCCGGGTGCATTCGAGTAATGGCCTGATATATTGCCCAAGTTCA TCGTGTCCGTTGTCGATCGATCTGGCTTCTGCTGTCCTGTGTT GTCATCGTCGCTAGT TTGCC TGTTCCCTGCTTATATTGTCGTGTGACCAAATAATATGAAGCCTCTTCTTGTTGTGACGTAGT TTCATACCATGTACCTCGTTGCTTTACAGGTCATTTGTTTTCTCCCTTGTTTAGTGATTAAATAAAATTGTTAATCGACC ]
[-] EMBL BU673812 [ AAATGAGATGAAACTTCAGCAAGTCCTCAATGTTTATGATGAGATACTCTCAAAGAATGAGTACCTGGCTGGTGATGAGTTCACCCTGGCTGACCTTTCTCACCTTCCAAACTCACATTACATTGTGAGTTCTGAGAGAGGAAGGAAGCTCTTCACTGGCAGGAAGAATGTGGCAAGGTGGTACGACCAAATCTCAAAGCGCGAGACATGGAAGCAGGTGGTCAAGATGCAGAGGGAGCATCCGGGTGCATTCGAGTAATGGCCTGATATATTGCCCAAGTTCA TCGTGTCCGTTGTCGATCGATCTGGCTTCTGCTGTCCTGTGTT GTCATCGTCGCTAGT TTGCC TGTCCCCTGCTTATATTGTCGTGTGACCAAATAATATGAAGCCTCTTCTTGTTGTGACGTAGT TTCATACCATGTACCTCGTTGCTTTACAGGTCATTTGTTTTTTCCCTTGTTTAGTGATTAAATAAAATTGTTAATCGACCTGGCAG ]
[-] EMBL BU673645 [ gtAGAGAGGTAGGAAGCTCTTCACTGGCAGGAAGAATGTGGCAAGGTGGTACGACCCAATTTCAAAGCGCGAGACATGGAACCAGGTGGTCAAGATGCAGAGGGAGCATCCGGGGGCATTCGAGTAATGGCCTGATATATTGCCCAAGTTCAGTCGTGTCCGTTGTCGATCGATCTGGCTTCTGCTGTCCTGTGTTGGTCATCGTCGCTAGTGTTGCCGTGTCCCCTGCTTATATTGTCGGGTGACCCAATAATATGAAGCCTCTTCTTGTTGTGACGTAGTGTTCATACCATGTACCTCGGTGCTTTACAGGTCATTGGTTTTCTCCCTTGTTTAGGGATTAAATAAAATTGTTAATCGACCT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||