cluster # 7616

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Oryza sativa
cluster # 7616 cluster # 7616 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7616#0 length = 1187 sequences # 5
consensusID : consensus_7616#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1187
fasta sequence
                              [CAGCACGCGCGCGAATTCGGAGCAGCCGCCGCCGCCCGCCGCAGTCGTCGTCGTCGCCGCCGCCTCGCCGGAAATGGTCAAGAACGCCATCCAGTACGCCGTGGTGGACGCGTTCGCGGCCGAGCCGTTCAAGGGCAACCCCGCCGCCGTATGCCTCCTGGAAGGGGAGGATGCCGCGGCGGCGGCGG-ACGAGCGGTGGATGCAGTCCGTCGCAGCCGAGTTCAACCTCTCCGAGACCGCCTTCCTCATCCGCGACCCCTCCTCCTCCGCCGCCGCCGCCGACGCCGCCCCGCGGTTCCGCCTCCGCTGGTTCACCCCCGTCGCCGAGGTGAATCTCTGCGGCCACGCGACGCTGGCATCCGCCCACTTCCTCTTCACCACCGTCCTCGCGAAGCAGCAGCACGCCGCCGCCGCCATGGTCGAGTTCGTGACGAGGTCCGGCATCCTGACCGCCAAGAAGGTTCCTGCTCCGCCGCCTCCGGCGAACGATGGCGGCGTCCCGGGTGAGGAGAAGTTGTTCATCGAGCTGGATTTCCCCATGATCGATCTCGTGGAGTACGATTCCGCGGAGACGCTGTCGATTCCGGAGACTCTGAATGGCGCCCGAGTCGTCAGTGTTTGGAAATCATCAACCGCCGGTGACCTCATCGTGGAACTTTCTTCCGGAAAAGAGGTTGCTGATATTATCCCTAACATTAATGAAATTAAAAAATGTGATGGTAGAGGAGTTATTGTTACGGGACCAGCACCTGCTGGATCTGATTATGACTTCTTTTCACGATTCTTCTGCCCAAAATTTGGGATAGATGAGGATCCTGTGTGTGGAAGCGCACATTGTGTTCTGG-CACCTTACTGGGGTGGAAAGCTGGGGAAACAAAAACTTACGGCGTTTCAGGCTTCGCCA-AGGAGTGGAACATTGTACTTGGAGCTGGA-CGGCGAGAACAGGAGAGTCCGGATCCAGGGAGAAGCTGTCACTGTGATGGCCGGGACTCTCTTGGCGTAGCATCTCTCTCTGTCA-GAGTGTCTGGCGATCTGCTTGCTCTTGTATGCTTGAGAGTTCA-G-CGGAGAAATTGTTGTTGTTCGACGCGTACCGCGAACGATTGTAATTGATGTTATATTTGGGAATAAAAGGATCTGCAATGTTTAT-AAGCAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAA]

[+] EMBL AK101084             [CAGCACGCGCGCGAATTCGGAGCAGCCGCCGCCGCCCGCCGCAGTCGTCGTCGTCGCCGCCGCCTCGCCGGAAATGGTCAAGAACGCCATCCAGTACGCCGTGGTGGACGCGTTCGCGGCCGAGCCGTTCAAGGGCAACCCCGCCGCCGTATGCCTCCTGGAAGGGGAGGATGCCGCGGCGGCGGCGG ACGAGCGGTGGATGCAGTCCGTCGCAGCCGAGTTCAACCTCTCCGAGACCGCCTTCCTCATCCGCGACCCCTCCTCCTCCGCCGCCGCCGCCGACGCCGCCCCGCGGTTCCGCCTCCGCTGGTTCACCCCCGTCGCCGAGGTGAATCTCTGCGGCCACGCGACGCTGGCATCCGCCCACTTCCTCTTCACCACCGTCCTCGCGAAGCAGCAGCACGCCGCCGCCGCCATGGTCGAGTTCGTGACGAGGTCCGGCATCCTGACCGCCAAGAAGGTTCCTGCTCCGCCGCCTCCGGCGAACGATGGCGGCGTCCCGGGTGAGGAGAAGTTGTTCATCGAGCTGGATTTCCCCATGATCGATCTCGTGGAGTACGATTCCGCGGAGACGCTGTCGATTCCGGAGACTCTGAATGGCGCCCGAGTCGTCAGTGTTTGGAAATCATCAACCGCCGGTGACCTCATCGTGGAACTTTCTTCCGGAAAAGAGGTTGCTGATATTATCCCTAACATTAATGAAATTAAAAAATGTGATGGTAGAGGAGTTATTGTTACGGGACCAGCACCTGCTGGATCTGATTATGACTTCTTTTCACGATTCTTCTGCCCAAAATTTGGGATAGATGAGGATCCTGTGTGTGGAAGCGCACATTGTGTTCTGG CACCTTACTGGGGTGGAAAGCTGGGGAAACAAAAACTTACGGCGTTTCAGGCTTCGCCA AGGAGTGGAACATTGTACTTGGAGCTGGA CGGCGAGAACAGGAGAGTCCGGATCCAGGGAGAAGCTGTCACTGTGATGGCCGGGACTCTCTTGGCGTAGCATCTCTCTCTGTCA GAGTGTCTGGCGATCTGCTTGCTCTTGTATGCTTGAGAGTTCA G CGGAGAAATTGTTGTTGTTCGACGCGTACCGCGAACGATTGTAATTGATGTTATATTTGGGAATAAAAGGATCTGCAATG                                              ]
[+] EMBL C25991               [               TTCGGAGCAGCCGCCGCCGCCCGCCGCAGTCGTCGTCGTCGCCGCCGCCTCGNCGGAAATGGTCAAGAACGCCATCCAGTACGCCGTGGTGGACGCGTTCG GGCCGAGCCGTTCAAGGGCAACCCCGCCGCCGTATGCCTCCTGGAAGGGGAGGATGCCGNGGCGGC GCGGAACGAGCGGTGGATGCAGTCCGTCGCAGCCGAGTTCAACCTCTCCNAGACCGCCTTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF330171             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CACCTGCTGGATCTGATTATGACTTCTTTTCACGATTCTTCTGCCCAAAATTTGGGATAGATGAGGATCCTGTGTGTGGAAGCGCACATTGTGTTCTGG CACCTTACTGGGGTGGAAAGCTGGGGAAACAAAAACTTACGGCGTTTCAGGCTTCGCCA AGGAGTGGAACATTGTACTTGGAGCTGGA CGGCGAGAACAGGAGAGTCCGGATCCAGGGAGAAGCTGTCACTGTGATGGCCGGGACTCTCTTGGCGTAGCATCTCTCTCTGTCA GAGTGTCTGGCGATCTGCTTGCTCTTGTATGCTTGAGAGTTCA G CGGAGAAATTGTTGTTGTTCGACGCGTACCGCGAACGATTGTAATTGATGTTATATTTGGGAATAAAAGGATCTGCAATG                                              ]
[-] EMBL CF330172             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACCTGCTGGATCTGATTATGACTTCTTTTCACGATTCTTCTGCCCAAAATTTGGGATAGATGAGGATCCTGTGTGTGGAAGCGCACATTGTGTTCTGG CACCTTACTGGGGTGGAAAGCTGGGGAAACAAAAACTTACGGCGTTTCAGGCTTCGCCA AGGAGTGGAACATTGTACTTGGAGCTGGA CGGCGAGAACAGGAGAGTCCGGATCCAGGGAGAAGCTGTCACTGTGATGGCCGGGACTCTCTTGGCGTAGCATCTCTCTCTGTCA GAGTGTCTGGCGATCTGCTTGCTCTTGTATGCTTGAGAGTTCA G CGGAGAAATTGTTGTTGTTCGACGCGTACCGCGAACGATTGTAATTGATGTTATATTTGGGAATAAAAGGATCTGCAATGTTTAT AAGCAAAAAAAAA                           ]
[+] EMBL BI805044             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGATCTGATTATGACTTCTTTTCACGATTCTTCTGCCCCAAATTTGGGATAGATGAGGATCCTGTGTGTGGAAGCGCACCTTGTGTTCTGGCCACCTTACTGGGGTGGAAAGCTGGGGAAACCAAAACTTACGGCGTTTCAGGCTTCGCCACAGGAGTGGAACCTTGTACTTGGAGCTGGACCGGCGAGACCCGGAGAGTCCGGATCCCGGGAGAAGCTGTCCCTGTGATGGCCGGGACTCTCTTGGCGTAGCATCTCTCTCTGTCACGAGTGTCTGGCGATCTGCTTGCTCTTGTATGCTTGAGAGTTCACGCCGGAGAAATTGTTGTTGTTCGACGCGTACCGCGAACGATTGTAATTGATGTTATATTTGGGAATAAAAGGATCTGCCATGTTTATGAAGCCAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAA]




>consensus_7616#0
CAGCACGCGCGCGAATTCGGAGCAGCCGCCGCCGCCCGCCGCAGTCGTCGTCGTCGCCGC
CGCCTCGCCGGAAATGGTCAAGAACGCCATCCAGTACGCCGTGGTGGACGCGTTCGCGGC
CGAGCCGTTCAAGGGCAACCCCGCCGCCGTATGCCTCCTGGAAGGGGAGGATGCCGCGGC
GGCGGCGGACGAGCGGTGGATGCAGTCCGTCGCAGCCGAGTTCAACCTCTCCGAGACCGC
CTTCCTCATCCGCGACCCCTCCTCCTCCGCCGCCGCCGCCGACGCCGCCCCGCGGTTCCG
CCTCCGCTGGTTCACCCCCGTCGCCGAGGTGAATCTCTGCGGCCACGCGACGCTGGCATC
CGCCCACTTCCTCTTCACCACCGTCCTCGCGAAGCAGCAGCACGCCGCCGCCGCCATGGT
CGAGTTCGTGACGAGGTCCGGCATCCTGACCGCCAAGAAGGTTCCTGCTCCGCCGCCTCC
GGCGAACGATGGCGGCGTCCCGGGTGAGGAGAAGTTGTTCATCGAGCTGGATTTCCCCAT
GATCGATCTCGTGGAGTACGATTCCGCGGAGACGCTGTCGATTCCGGAGACTCTGAATGG
CGCCCGAGTCGTCAGTGTTTGGAAATCATCAACCGCCGGTGACCTCATCGTGGAACTTTC
TTCCGGAAAAGAGGTTGCTGATATTATCCCTAACATTAATGAAATTAAAAAATGTGATGG
TAGAGGAGTTATTGTTACGGGACCAGCACCTGCTGGATCTGATTATGACTTCTTTTCACG
ATTCTTCTGCCCAAAATTTGGGATAGATGAGGATCCTGTGTGTGGAAGCGCACATTGTGT
TCTGGCACCTTACTGGGGTGGAAAGCTGGGGAAACAAAAACTTACGGCGTTTCAGGCTTC
GCCAAGGAGTGGAACATTGTACTTGGAGCTGGACGGCGAGAACAGGAGAGTCCGGATCCA
GGGAGAAGCTGTCACTGTGATGGCCGGGACTCTCTTGGCGTAGCATCTCTCTCTGTCAGA
GTGTCTGGCGATCTGCTTGCTCTTGTATGCTTGAGAGTTCAGCGGAGAAATTGTTGTTGT
TCGACGCGTACCGCGAACGATTGTAATTGATGTTATATTTGGGAATAAAAGGATCTGCAA
TGTTTATAAGCAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAA
clustalw multiple alignements is not computed in this case