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Oryza sativa
cluster # 7618 cluster # 7618       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7618#0 length = 738 sequences # 5  

consensusID : consensus_7618#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 738
fasta sequence
                              [TTTTTTTNTTNCGAATAATGTGGCTCAACACATGCCAACTGGGTCTAGGAATTAATAGTAGATTCTCATGTGACATACACTACTACAGAAAGGCTCTGTACATGCGGACGAAGAGGATCTTTGCCCCAACCGCATGGAGGAGAAGGTCTGCAAAAATCGCTCTTTTTACATACGGCCGGCGCAACCGTATACGAAGATCCTATTTTCGCATGCGGTCACTTATACCGGCCGCATGCAAAAATAAATTCGGCAAACAAAAAAAATAAAATCCAAAAAACCCCCAAACCCTAGCCCGCCGCCGGATCCGTCGCCCCGCCGCACGCTGTCGCCGGATCCGTCGGCGACGGCACCGAATCGGCGTTGGGCAGCGCCGCCCGAGGCGGCCGAGCCACCCCCGCCGCCGTGGCGTTGAGGAGGGGGGATGCGCCGCGCCGTCGAGGAAGGGAGGCCGCCGCCACCGGTGCCGAGCCCGCAGCGCGCCCGCCGTCCAGACCCGCCGCCCGCCGCCGTCGTCGTCGTCATCGCCGTGCCCGCTGCCGTCGAGGAAGAGAGCGCCGCGTATGGAGGTCGGGGAAGGCCGCCGCCGCTATTGCAAAGCCCGCCGCGCGCTGCCGCGCCGGATGGGAGATCGGGGAAGGGAGGCCGCCGCCGTTGCCGAGCCCGCCGCAACCGGTGCCGCGCCGCACCGCCGCTCCTGCATGCTCGGTGCGTTGAGAGAGAGAGAGAAAGAGGAGAGGA]

[-] EMBL CA754109             [TTTTTTTNTTNCGAATAATGTGGCTCAACACATGCCAACTGGGTCTAGGAATTAATAGTAGATTCTCATGTGACATACACTACTACAGAAAGGCTCTGTACATGCGGACGAAGAGGATCTTTGCCCCAACCGCATGGAGGAGAAGGTCTGCAAAAATCGCTCTTTTTACATACGGCCGGCGCAACCGTATACGAAGATCCTATTTTCGCATGCGGTCACTTATACCGGCCGCATGCAAAAATAAATTCGGCAAACAAAAAAAATAAAATCCAAAAAACCCCCAAACCCTAGCCCGCCGCCGGATCCGTCGCCCCGCCGCACGCTGTCGCCGGATCCGTCGGCGACGGCACCGAATCGGCGTTGGGCAGCGCCGCCCG                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB684013             [                  TGTGGCTCAACACATGCCAACTGGGTCTACGAATTAATAGTAGATTCTCATGTGACATACACTACTACAGAAAGGCTCTGTACATGCGGACGAAGAGGATCTTTGCCCCAACCGCATGGAGGAGAAGGTCTGCAAAAATCGCTCTTTTTACATACGGCCGGCGCAACCGTATACGAAGATCCTATTTTCGCATGCGGTCACTTATACCGGCCGCATGCAAAAATAAATTCGGCAAACAAAAAAAATAAAATCCAAAAAACCCCCAAACCCTAGCCCGCCGCCGGATCCGTCGCCCCGCCGCACGCTGTCGCCGGATCCGTCGGCGACGGCACCGAATCGGCGTTGGGCAGCGCCGCCCGAGGCGGCCGAGCCACCCCCGCCGCCGTGGCGTTGAGGAGGGGGGATGCGCCGCGCCGTCGAGGAAGGGAGGCCGCCGCCACCGGTGCCGAGCCCGCAGCGCGCCCGCCGTCCAGACCCGCCGCCCGCCGCCGTCGTCGTCGTCATCGCCGTGCCCGCTGCCGTCGAGGAAGAGAGCGCCGCGTATGGAGGTCGGGGAAGGCCGCCGCCGCTATTGCAAAGCCCGCCGCGCGCTGCCGCGCCGGATGGGAGATCGGGGAAGGGAGGCCGCCGCCGTTGCCGAGCCCGCCGCAACCGGTGCCGCGCCGCACCG                                                  ]
[-] EMBL CB684012             [                          AACACATGCCAACTGGGTCTAGGAATTAATAGTAGATTCTCATGTGACATACACTACTACAGAAAGGCTCTGTACATGCGGACGAAGAGGATCTTTGCCCCAACCGCATGGAGGAGAAGGTCTGCAAAAATCGCTCTTTTTACATACGGCCGGCGCAACCGTATACGAAGATCCTATTTTCGCATGCGGTCACTTATACCGGCCGCATGCAAAAATAAATTCGGCAAACAAAAAAAATAAAATCCAAAAAACCCCCAAACCCTAGCCCGCCGCCGGATCCGTCGCCCCGCCGCACGCTGTCGCCGGATCCGTCGGCGACGGCACCGAATCGGCGTTGGGCAGCGCCGCCCGAGGCGGCCGAGCCACCCCCGCCGCCGTGGCGTTGAGGAGGGGGGATGCGCCGCGCCGTCGAGGAAGGGAGGCCGCCGCCACCGGTGCCGAGCCCGCAGCGCGCCCGCCGTCCAGACCCGCCGCCCGCCGCCGTCGTCGTCGTCATCGCCGTGCCCGCTGCCGTCGAGGAAGAGAGCGCCGCGTATGGAGGTCGGGGAAGGCCGCCGCCGCTATTGCAAAGCCCGCCGCGCGCTGCCGCGCCGGATGGGAGATCGGGGAAGGGAGGCCGCCGCCGTTGCCGAGCCCGCCGCAACCGGTGCCGCG                                                          ]
[-] EMBL AU172801             [                              tttttttttTGGGTCTAGGAATTAATAGTAGATTCTCATGTGACATACACTACTACAGAAAGGCTCTGTACATGCGGACGAAGAGGATCTTTGCCCCAACCGCATGGAGGAGAAGGTCTGCAAAAATCGCTNTTTTTACATACGGCCGGCGCAACCGTATACGAAGATCCTATTTTCGCATGCGGTCACTTATACCGGCCGCATGCAAAAATAAATTCGGCAAACAAAAAAAATAAAATCCAAAAAACCCCCAAACCCTAGCCCGCCGCCGGATCCGTCGCCCCGCCGCACGCTGTCGCCGGATCCGTCGGCGACGGCACCGAATCGGCGTTGGGCAGCGCCGCCCGAGGCGGCCGAGCCACCCCCGCCGCCGTGGCGTTGAGGAGGGGGGATGCGCCGCGCCGTCGAGGAAGGGAGGCCGC                                                                                                                                                                                                                                                                                              ]
[-] EMBL AU064437             [                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGAAGGGAGGCCGCCGCCACCGGTGCCGAGCCCGCAGNGCGCCCGCCGTCCAGACCCGCCGCCCGCCGCCGTCGTCGTCGTCATCGCCGTGCCAGCTGCCGTCGAGGAAGAGAGCGCCGCGTATGGAGGTCGGGGAAGGCCGCCGCCGCTATTGCAAAGCCCGTC CGCGCTGCCGCGCCGGATGGGAGATCGGGGAAGGGAGGCCGCCGCCGTTGCCGAGCCCGCCGCAACCGGTGCCGCGCCGCACCGCCGCTCCTGCATGCTCGGTGCGTTGAGAGAGAGAGAGAAAGAGGAGAGGA]


>consensus_7618#0 TTTTTTTNTTNCGAATAATGTGGCTCAACACATGCCAACTGGGTCTAGGAATTAATAGTA GATTCTCATGTGACATACACTACTACAGAAAGGCTCTGTACATGCGGACGAAGAGGATCT TTGCCCCAACCGCATGGAGGAGAAGGTCTGCAAAAATCGCTCTTTTTACATACGGCCGGC GCAACCGTATACGAAGATCCTATTTTCGCATGCGGTCACTTATACCGGCCGCATGCAAAA ATAAATTCGGCAAACAAAAAAAATAAAATCCAAAAAACCCCCAAACCCTAGCCCGCCGCC GGATCCGTCGCCCCGCCGCACGCTGTCGCCGGATCCGTCGGCGACGGCACCGAATCGGCG TTGGGCAGCGCCGCCCGAGGCGGCCGAGCCACCCCCGCCGCCGTGGCGTTGAGGAGGGGG GATGCGCCGCGCCGTCGAGGAAGGGAGGCCGCCGCCACCGGTGCCGAGCCCGCAGCGCGC CCGCCGTCCAGACCCGCCGCCCGCCGCCGTCGTCGTCGTCATCGCCGTGCCCGCTGCCGT CGAGGAAGAGAGCGCCGCGTATGGAGGTCGGGGAAGGCCGCCGCCGCTATTGCAAAGCCC GCCGCGCGCTGCCGCGCCGGATGGGAGATCGGGGAAGGGAGGCCGCCGCCGTTGCCGAGC CCGCCGCAACCGGTGCCGCGCCGCACCGCCGCTCCTGCATGCTCGGTGCGTTGAGAGAGA GAGAGAAAGAGGAGAGGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)