These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7626#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1712 fasta sequence [CCAGATCGGAAAAACAAAGGTATTTCTGAGAGCTGGACAGATGGCTGATCTGGATGCACGAAGAGCAGAAGTGCTAGGAAGAGCAGCAAGAATTATACAGAGACAAATCTCTACATATATCGCACGGAAACAGTTTGTTTCGCTCAGAAGATCAGCAACACAGCTACAATCTTTCGTTAGAGGGACCTTGGCGCGTAAATTATACGAATGCATGAGGCGGGAAGCATCAGCAGTGAAGATACAAAAGAATGTTCGTCGTCACAAAGCTCGCGTGTCTTATTTACAACTACAGGAGGCTGCAATCACGTTGCAGACAGGATTAAGGGCAATGTCTGCCCGCAAAGAGTTCAGATTCAGAAAAGAAACTAAAGCAGCTGTCCATATCCAAGCTCGATGGCGTTGCCACAGAGACTATGCACATTACAAGAATCTGCAAGGAGCAGCTCTTACTTATCAGTGTGCATGGAGACAAAGGCTTGCAAGAAGAGAGCTTAGAAAGCTAAAAATGGCTGCGAGAGAAACAGGGGCCCTTAAGGAGGCCAAGGATAAACTTGAGAAGCGTGTTGAAGAACTGACATGGCGCCTTGGACTGGAGAAGCGGTTAAGGACTGACCTTGAGGAAGCAAAAGCCCAGGAAATTGCTAAGCTGCAAGAGACATTGCATGATATGCAACAGCAAGTTGAAGAAGCAAAGGCTATGATTGTTAAGGAAAGAGAAGCAGCTAGAAAGGCAATAGAAGAGGCACCTCCAGTAATCAAAGAGACCCCTGTATTGGTCGAAGACACGGAAAAGATTAACTCACTGACAGCAGAGGTTGAACAACTGAAGGCTTTGCTGCAAACAGAAAGGCAAGCAACAGAAACTGCAAAGAAAGAATATGCTGAAGCTGAACGGAGAAATGAAGAACTAATCAAGAAATTTGAAGGTGCAGAGAAAAAGATTGAGCAACTTCAGGATACTGTCCAGAGGCTGGAAGAGAAAGCAACTAACATGGAGTCTGAGAACAAAGTGCTACGTCAACAGGCTGTTGCTATTTCTCCTACGGCAAAATCATTAGCTGCATATCCTAAGTCTCCCTTCCAACTTAAAACTCCGGAGAATGGTGTAGCTCCGTATGGAGAAGTGAAACCGTTACCTGATATCACCCCTATCTCACTCAACCCTAAAGAGCCTGAGACTGAGGAGAAGCCACAAAAATCACTCAACGAGAAGCAACAGGAAAACCAAGATATGCTGATCAAATGTGTATCACAAGATCTAGGTNTCTCCAGTGGGAGGCCCATTGCTGCTTGCCTTATATACAGATGCCTTCTGCATTGGAGATCATNTGAAGTNGAAAGGACTGGTGTTTTTGACCGTATAATTCAAACAATAGGCACTGCTATAGAGGCCCAGGACAATAACGACAAACTAGCATATTGGCTCTCCAATNCATCCACATTACTCCTACTATTACCACGAACACTGAAAACAACTGGAGCAGCTGGACTCCACCTCAGAGGCGAAGATCTTCTGCTGCATCATTGGGCGGGTGTCTCGGGAATAGAGCTCCCACAGAGTGCTGGCCGTCCTTTCTGCCAGCCGCTGATGGGAGGACTAGTATCTCGTCAGTGAACCCAGTATCNGCCCTGCTNTCAGCACACCTACCGCTTCTTAGAACATCATGCNTGATAAACACTGAGAAGAAATCCANTCNTGCGTTCCTGGCACG] [+] EMBL C26455 [CCAGATCGGAAAAACAAAGGTATTTCTGAGAGCTGGACAGATGGCTGATCTGGATGCACGAAGAGCAGAAGTGCTAGGAAGAGCAGCAAGAATTATACAGAGACAAATCTCTACATATATCGCACGGAAACAGTTTGTTTCGCTCAGAAGATCAGCAACACAGCTACAATCTTTCGTTAGAGGGACCTTGGCGCGTAAATTATACGAATGCATGAGGCGGGAAGCATCAGCAGTGAAGATACAAAAGAATGTTCGTCGTCACAAAGCTCGCGTGTCTTATTTACAACTACAGGAGGCTGCAATCACGTTGCAGACAGGATTAAGGGCAATGTCTGCCCGCAAAGAGTTCAGATTCAGAAAAGGAACTAAAGCAGCTGTCCATATCCAAGCTCGATGGCGTTTCCACAGAGAC ] [+] EMBL CB631465 [ AATGTCTGCCCGCAAAGAGTTCAGATTCAGAAAGGAAACTAAAGCAGCTGTGCATATCCAAGCTCGATGGCGTTGCCACAGAGACTATGCACATTACAAGAATCTGCAAGGAGCAGCTCTTACTTATCAGTGTGCATGGAGACAAAGGCTTGCAAGAAGAGAGCTTAGAAAGCTAAAAATGGCTGCGAGAGAAACAGGGGCCCTTAAGGAGGCCAAGGATAAACTTGAGAAGCGTGTTGAAGAACTGACATGGCGCCTTGGACTGGAGAAGCGGTTAAGGACTGACCTTGAGGAAGCAAAAGCCCAGGAAATTGCTAAGCTGCAAGAGACATTGCATGATATGCAACAGCAAGTTGAAGAAGCAAAGGCTATGATTGTTAAGGAAAGAGAAGCAGCTAGAAAGGCAATAGAAGAGGCACCTCCAGTAATCAAAGAGACCCCTGTATTGGTCGAAGACACGGAAAAGATTAACTCACTGACAGCAGAGGTTGAACAACTGAAGGCTTTGCTGCAAACAGAAAGGCAAGCAACAGAAACTGCAAAGAAAGAATATGCTGAAGCTGAACGGAGAAATGAAGAACTAATCAAGAAATTTGAAGGTGCAGAGAAAAAGATTGAGCAACTTCAGGATACTGTCCAGAGGCTGGAAGAGAAAGCAACTAACATGGAGTCTGAGAACAAAGTGCTACGTCAACAGGCTGTTGCTATTTCTCCTACGGCAAAATCATTAGCTGCATATCCTAAGTCTCCCTTCCAACTTAAAACTCCGGAGAATGGTGTAGCTCCGTATGGAGAAGTGAAACCGT ] [+] EMBL CF304996 [ GAAACTAAAGCAGCTGTCCATATCCAAGCTCGATGGCGTTGCCACAGAGACTATGCACATTACAAGAATCTGCAAGGAGCAGCTCTTACTTATCAGTGTGCATGGAGACAAAGGCTTGCAAGAAGAGAGCTTAGAAAGCTAAAAATGGCTGCGAGAGAAACAGGGGCCCTTAAGGAGGCCAAGGATAAACTTGAGAAGCGTGTTGAAGAACTGACATGGCGCCTTGGACTGGAGAAGCGGTTAAGGACTGACCTTGAGGAAGCAAAAGCCCAGGAAATTGCTAAGCTGCAAGAGACATTGCATGATATGCAACAGCAAGTTGAAGAAGCAAAGGCTATGATTGTTAAGGAAAGAGAAGCAGCTAGAAAGGCAATAGAAGAGGCACCTCCAGTAATCAAAGAGACCCCTGTATTGGTCGAAGACACGGAAAAGATTAACTCACTGACAGCAGAGGTTGAACAACTGAAGGCTTTGCTGCAAACAGAAAGGCAAGCAACAGAAACTGCAAAGAAAGAATATGCTGAAGCTGAACGGAGAAATGAA ] [+] EMBL CF303212 [ GAAACTAAAGCAGCTGTCCATATCCAAGCTCGATGGCGTTGCCACAGAGACTATGCACATTACAAGAATCTGCAAGGAGCAGCTCTTACTTATCAGTGTGCATGGAGACAAAGGCTTGCAAGAAGAGAGCTTAGAAAGCTAAAAATGGCTGCGAGAGAAACAGGGGCCCTTAAGGAGGCCAAGGATAAACTTGAGAAGCGTGTTGAAGAACTGACATGGCGCCTTGGACTGGAGAAGCGGTTAAGGACTGACCTTGAGGAAGCAAAAGCCCAGGAAATTGCTAAGCTGCAAGAGACATTGCATGATATGCAACAGCAAGTTGAAGAAGCAAAGGCTATGATTGTTAAGGAAAGAGAAGCAGCTAGAAAGGCAATAGAAGAGGCACCTCCAGTAATCAAAGAGACCCCTGTATTGGTCGAAGACACGGAAAAGATTAACTCACTGACAGCAGAGGTTGAACAACTGAAGGCTTTGCTGCAAACAGAAAGGCAAGCAACAGAAACTGCAAAGAAAGAATATGCTGAAGCTGAACGGAGAA ] [+] EMBL CA753419 [ CAAGAAATTTGAAGGTGCAGAGAAAAAGATTGAGCAACTTCAGGATACTGTCCAGAGGCTGGAAGAGAAAGCAACTAACATGGAGTCTGAGAACAAAGTGCTACGTCAACAGGCTGTTGCTATTTCTCCTACGGCAAAATCATTAGCTGCATATCCTAAGTCTCCCTTCCAACTTAAAACTCCGGAGAATGGTGTAGCTCCGTATGGAGAAGTGAAACCGTTACCTGATATCACCCCTATCTCACTCAACCCTAAAGAGCCTGAGACTGAGGAGAAGCCACAAAAATCACTCAACGAGAAGCAACAGGAAAACCAAGATATGCTGATCAAATGTGTATCACAAGATCTAGGTNTCTCCAGTGGGAGGCCCATTGCTGCTTGCCTTATATACAGATGCCTTCTGCATTGGAGATCATNTGAAGTNGAAAGGACTGGTGTTTTTGACCGTATAATTCAAACAATAGGCACTGCTATAGAGGCCCAGGACAATAACGACAAACTAGCATATTGGCTCTCCAATNCATCCACATTACTCCTACTATTACCACGAACACTGAAAACAACTGGAGCAGCTGGACTCCACCTCAGAGGCGAAGATCTTCTGCTGCATCATTGGGCGGGTGTCTCGGGAATAGAGCTCCCACAGAGTGCTGGCCGTCCTTTCTGCCAGCCGCTGATGGGAGGACTAGTATCTCGTCAGTGAACCCAGTATCNGCCCTGCTNTCAGCACACCTACCGCTTCTTAGAACATCATGCNTGATAAACACTGAGAAGAAATCCANTCNTGCGTTCCTGGCACG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||