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Oryza sativa
cluster # 7626 cluster # 7626       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7626#0 length = 1712 sequences # 5  

consensusID : consensus_7626#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1712
fasta sequence
                              [CCAGATCGGAAAAACAAAGGTATTTCTGAGAGCTGGACAGATGGCTGATCTGGATGCACGAAGAGCAGAAGTGCTAGGAAGAGCAGCAAGAATTATACAGAGACAAATCTCTACATATATCGCACGGAAACAGTTTGTTTCGCTCAGAAGATCAGCAACACAGCTACAATCTTTCGTTAGAGGGACCTTGGCGCGTAAATTATACGAATGCATGAGGCGGGAAGCATCAGCAGTGAAGATACAAAAGAATGTTCGTCGTCACAAAGCTCGCGTGTCTTATTTACAACTACAGGAGGCTGCAATCACGTTGCAGACAGGATTAAGGGCAATGTCTGCCCGCAAAGAGTTCAGATTCAGAAAAGAAACTAAAGCAGCTGTCCATATCCAAGCTCGATGGCGTTGCCACAGAGACTATGCACATTACAAGAATCTGCAAGGAGCAGCTCTTACTTATCAGTGTGCATGGAGACAAAGGCTTGCAAGAAGAGAGCTTAGAAAGCTAAAAATGGCTGCGAGAGAAACAGGGGCCCTTAAGGAGGCCAAGGATAAACTTGAGAAGCGTGTTGAAGAACTGACATGGCGCCTTGGACTGGAGAAGCGGTTAAGGACTGACCTTGAGGAAGCAAAAGCCCAGGAAATTGCTAAGCTGCAAGAGACATTGCATGATATGCAACAGCAAGTTGAAGAAGCAAAGGCTATGATTGTTAAGGAAAGAGAAGCAGCTAGAAAGGCAATAGAAGAGGCACCTCCAGTAATCAAAGAGACCCCTGTATTGGTCGAAGACACGGAAAAGATTAACTCACTGACAGCAGAGGTTGAACAACTGAAGGCTTTGCTGCAAACAGAAAGGCAAGCAACAGAAACTGCAAAGAAAGAATATGCTGAAGCTGAACGGAGAAATGAAGAACTAATCAAGAAATTTGAAGGTGCAGAGAAAAAGATTGAGCAACTTCAGGATACTGTCCAGAGGCTGGAAGAGAAAGCAACTAACATGGAGTCTGAGAACAAAGTGCTACGTCAACAGGCTGTTGCTATTTCTCCTACGGCAAAATCATTAGCTGCATATCCTAAGTCTCCCTTCCAACTTAAAACTCCGGAGAATGGTGTAGCTCCGTATGGAGAAGTGAAACCGTTACCTGATATCACCCCTATCTCACTCAACCCTAAAGAGCCTGAGACTGAGGAGAAGCCACAAAAATCACTCAACGAGAAGCAACAGGAAAACCAAGATATGCTGATCAAATGTGTATCACAAGATCTAGGTNTCTCCAGTGGGAGGCCCATTGCTGCTTGCCTTATATACAGATGCCTTCTGCATTGGAGATCATNTGAAGTNGAAAGGACTGGTGTTTTTGACCGTATAATTCAAACAATAGGCACTGCTATAGAGGCCCAGGACAATAACGACAAACTAGCATATTGGCTCTCCAATNCATCCACATTACTCCTACTATTACCACGAACACTGAAAACAACTGGAGCAGCTGGACTCCACCTCAGAGGCGAAGATCTTCTGCTGCATCATTGGGCGGGTGTCTCGGGAATAGAGCTCCCACAGAGTGCTGGCCGTCCTTTCTGCCAGCCGCTGATGGGAGGACTAGTATCTCGTCAGTGAACCCAGTATCNGCCCTGCTNTCAGCACACCTACCGCTTCTTAGAACATCATGCNTGATAAACACTGAGAAGAAATCCANTCNTGCGTTCCTGGCACG]

[+] EMBL C26455               [CCAGATCGGAAAAACAAAGGTATTTCTGAGAGCTGGACAGATGGCTGATCTGGATGCACGAAGAGCAGAAGTGCTAGGAAGAGCAGCAAGAATTATACAGAGACAAATCTCTACATATATCGCACGGAAACAGTTTGTTTCGCTCAGAAGATCAGCAACACAGCTACAATCTTTCGTTAGAGGGACCTTGGCGCGTAAATTATACGAATGCATGAGGCGGGAAGCATCAGCAGTGAAGATACAAAAGAATGTTCGTCGTCACAAAGCTCGCGTGTCTTATTTACAACTACAGGAGGCTGCAATCACGTTGCAGACAGGATTAAGGGCAATGTCTGCCCGCAAAGAGTTCAGATTCAGAAAAGGAACTAAAGCAGCTGTCCATATCCAAGCTCGATGGCGTTTCCACAGAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB631465             [                                                                                                                                                                                                                                                                                                                                       AATGTCTGCCCGCAAAGAGTTCAGATTCAGAAAGGAAACTAAAGCAGCTGTGCATATCCAAGCTCGATGGCGTTGCCACAGAGACTATGCACATTACAAGAATCTGCAAGGAGCAGCTCTTACTTATCAGTGTGCATGGAGACAAAGGCTTGCAAGAAGAGAGCTTAGAAAGCTAAAAATGGCTGCGAGAGAAACAGGGGCCCTTAAGGAGGCCAAGGATAAACTTGAGAAGCGTGTTGAAGAACTGACATGGCGCCTTGGACTGGAGAAGCGGTTAAGGACTGACCTTGAGGAAGCAAAAGCCCAGGAAATTGCTAAGCTGCAAGAGACATTGCATGATATGCAACAGCAAGTTGAAGAAGCAAAGGCTATGATTGTTAAGGAAAGAGAAGCAGCTAGAAAGGCAATAGAAGAGGCACCTCCAGTAATCAAAGAGACCCCTGTATTGGTCGAAGACACGGAAAAGATTAACTCACTGACAGCAGAGGTTGAACAACTGAAGGCTTTGCTGCAAACAGAAAGGCAAGCAACAGAAACTGCAAAGAAAGAATATGCTGAAGCTGAACGGAGAAATGAAGAACTAATCAAGAAATTTGAAGGTGCAGAGAAAAAGATTGAGCAACTTCAGGATACTGTCCAGAGGCTGGAAGAGAAAGCAACTAACATGGAGTCTGAGAACAAAGTGCTACGTCAACAGGCTGTTGCTATTTCTCCTACGGCAAAATCATTAGCTGCATATCCTAAGTCTCCCTTCCAACTTAAAACTCCGGAGAATGGTGTAGCTCCGTATGGAGAAGTGAAACCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF304996             [                                                                                                                                                                                                                                                                                                                                                                         GAAACTAAAGCAGCTGTCCATATCCAAGCTCGATGGCGTTGCCACAGAGACTATGCACATTACAAGAATCTGCAAGGAGCAGCTCTTACTTATCAGTGTGCATGGAGACAAAGGCTTGCAAGAAGAGAGCTTAGAAAGCTAAAAATGGCTGCGAGAGAAACAGGGGCCCTTAAGGAGGCCAAGGATAAACTTGAGAAGCGTGTTGAAGAACTGACATGGCGCCTTGGACTGGAGAAGCGGTTAAGGACTGACCTTGAGGAAGCAAAAGCCCAGGAAATTGCTAAGCTGCAAGAGACATTGCATGATATGCAACAGCAAGTTGAAGAAGCAAAGGCTATGATTGTTAAGGAAAGAGAAGCAGCTAGAAAGGCAATAGAAGAGGCACCTCCAGTAATCAAAGAGACCCCTGTATTGGTCGAAGACACGGAAAAGATTAACTCACTGACAGCAGAGGTTGAACAACTGAAGGCTTTGCTGCAAACAGAAAGGCAAGCAACAGAAACTGCAAAGAAAGAATATGCTGAAGCTGAACGGAGAAATGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF303212             [                                                                                                                                                                                                                                                                                                                                                                         GAAACTAAAGCAGCTGTCCATATCCAAGCTCGATGGCGTTGCCACAGAGACTATGCACATTACAAGAATCTGCAAGGAGCAGCTCTTACTTATCAGTGTGCATGGAGACAAAGGCTTGCAAGAAGAGAGCTTAGAAAGCTAAAAATGGCTGCGAGAGAAACAGGGGCCCTTAAGGAGGCCAAGGATAAACTTGAGAAGCGTGTTGAAGAACTGACATGGCGCCTTGGACTGGAGAAGCGGTTAAGGACTGACCTTGAGGAAGCAAAAGCCCAGGAAATTGCTAAGCTGCAAGAGACATTGCATGATATGCAACAGCAAGTTGAAGAAGCAAAGGCTATGATTGTTAAGGAAAGAGAAGCAGCTAGAAAGGCAATAGAAGAGGCACCTCCAGTAATCAAAGAGACCCCTGTATTGGTCGAAGACACGGAAAAGATTAACTCACTGACAGCAGAGGTTGAACAACTGAAGGCTTTGCTGCAAACAGAAAGGCAAGCAACAGAAACTGCAAAGAAAGAATATGCTGAAGCTGAACGGAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA753419             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAAGAAATTTGAAGGTGCAGAGAAAAAGATTGAGCAACTTCAGGATACTGTCCAGAGGCTGGAAGAGAAAGCAACTAACATGGAGTCTGAGAACAAAGTGCTACGTCAACAGGCTGTTGCTATTTCTCCTACGGCAAAATCATTAGCTGCATATCCTAAGTCTCCCTTCCAACTTAAAACTCCGGAGAATGGTGTAGCTCCGTATGGAGAAGTGAAACCGTTACCTGATATCACCCCTATCTCACTCAACCCTAAAGAGCCTGAGACTGAGGAGAAGCCACAAAAATCACTCAACGAGAAGCAACAGGAAAACCAAGATATGCTGATCAAATGTGTATCACAAGATCTAGGTNTCTCCAGTGGGAGGCCCATTGCTGCTTGCCTTATATACAGATGCCTTCTGCATTGGAGATCATNTGAAGTNGAAAGGACTGGTGTTTTTGACCGTATAATTCAAACAATAGGCACTGCTATAGAGGCCCAGGACAATAACGACAAACTAGCATATTGGCTCTCCAATNCATCCACATTACTCCTACTATTACCACGAACACTGAAAACAACTGGAGCAGCTGGACTCCACCTCAGAGGCGAAGATCTTCTGCTGCATCATTGGGCGGGTGTCTCGGGAATAGAGCTCCCACAGAGTGCTGGCCGTCCTTTCTGCCAGCCGCTGATGGGAGGACTAGTATCTCGTCAGTGAACCCAGTATCNGCCCTGCTNTCAGCACACCTACCGCTTCTTAGAACATCATGCNTGATAAACACTGAGAAGAAATCCANTCNTGCGTTCCTGGCACG]


>consensus_7626#0 CCAGATCGGAAAAACAAAGGTATTTCTGAGAGCTGGACAGATGGCTGATCTGGATGCACG AAGAGCAGAAGTGCTAGGAAGAGCAGCAAGAATTATACAGAGACAAATCTCTACATATAT CGCACGGAAACAGTTTGTTTCGCTCAGAAGATCAGCAACACAGCTACAATCTTTCGTTAG AGGGACCTTGGCGCGTAAATTATACGAATGCATGAGGCGGGAAGCATCAGCAGTGAAGAT ACAAAAGAATGTTCGTCGTCACAAAGCTCGCGTGTCTTATTTACAACTACAGGAGGCTGC AATCACGTTGCAGACAGGATTAAGGGCAATGTCTGCCCGCAAAGAGTTCAGATTCAGAAA AGAAACTAAAGCAGCTGTCCATATCCAAGCTCGATGGCGTTGCCACAGAGACTATGCACA TTACAAGAATCTGCAAGGAGCAGCTCTTACTTATCAGTGTGCATGGAGACAAAGGCTTGC AAGAAGAGAGCTTAGAAAGCTAAAAATGGCTGCGAGAGAAACAGGGGCCCTTAAGGAGGC CAAGGATAAACTTGAGAAGCGTGTTGAAGAACTGACATGGCGCCTTGGACTGGAGAAGCG GTTAAGGACTGACCTTGAGGAAGCAAAAGCCCAGGAAATTGCTAAGCTGCAAGAGACATT GCATGATATGCAACAGCAAGTTGAAGAAGCAAAGGCTATGATTGTTAAGGAAAGAGAAGC AGCTAGAAAGGCAATAGAAGAGGCACCTCCAGTAATCAAAGAGACCCCTGTATTGGTCGA AGACACGGAAAAGATTAACTCACTGACAGCAGAGGTTGAACAACTGAAGGCTTTGCTGCA AACAGAAAGGCAAGCAACAGAAACTGCAAAGAAAGAATATGCTGAAGCTGAACGGAGAAA TGAAGAACTAATCAAGAAATTTGAAGGTGCAGAGAAAAAGATTGAGCAACTTCAGGATAC TGTCCAGAGGCTGGAAGAGAAAGCAACTAACATGGAGTCTGAGAACAAAGTGCTACGTCA ACAGGCTGTTGCTATTTCTCCTACGGCAAAATCATTAGCTGCATATCCTAAGTCTCCCTT CCAACTTAAAACTCCGGAGAATGGTGTAGCTCCGTATGGAGAAGTGAAACCGTTACCTGA TATCACCCCTATCTCACTCAACCCTAAAGAGCCTGAGACTGAGGAGAAGCCACAAAAATC ACTCAACGAGAAGCAACAGGAAAACCAAGATATGCTGATCAAATGTGTATCACAAGATCT AGGTNTCTCCAGTGGGAGGCCCATTGCTGCTTGCCTTATATACAGATGCCTTCTGCATTG GAGATCATNTGAAGTNGAAAGGACTGGTGTTTTTGACCGTATAATTCAAACAATAGGCAC TGCTATAGAGGCCCAGGACAATAACGACAAACTAGCATATTGGCTCTCCAATNCATCCAC ATTACTCCTACTATTACCACGAACACTGAAAACAACTGGAGCAGCTGGACTCCACCTCAG AGGCGAAGATCTTCTGCTGCATCATTGGGCGGGTGTCTCGGGAATAGAGCTCCCACAGAG TGCTGGCCGTCCTTTCTGCCAGCCGCTGATGGGAGGACTAGTATCTCGTCAGTGAACCCA GTATCNGCCCTGCTNTCAGCACACCTACCGCTTCTTAGAACATCATGCNTGATAAACACT GAGAAGAAATCCANTCNTGCGTTCCTGGCACG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)