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Oryza sativa
cluster # 7644 cluster # 7644       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7644#0 length = 805 sequences # 5  

consensusID : consensus_7644#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 805
fasta sequence
                              [CGGCCGCTGCTTCGCCGCAATCCCCTTCTCCGCCTCCGCAGCTAAGCTAAGCTCGCCGCCACCGCCATGGGGATGGCTCCGGTCGCGACCTACCCGTCCTCCTCCTCCTCCTCCACCCTCGCGCGGCCTCCGTGTGCGGCTGCGGGGAGGGCGGCGGCGGCGGGCCGGGCACGCGTCGCGGCGGCCGGGATGTCCTCGAGGGCGTCCTCCTTCGTCACGGGAGGGGCGGGGGGGCTCGCCGTGGCGGTGGCCGCGCGGACGAGGGCGGGGTCGGGGGCGGGGTCGCGTGGGGGAGGCGCGATGGGGTGCAAGTGCCTGTTCGGGCTCGGCGTCCCGGAGCTGGTCGTCATCGCGGGCGTCGCCGCGCTGGTGTTCGGCCCCAAGCAGCTGCCCGAGATCGGCCGCAGCATCGGCAAGACCGTCAAGAGCTTCCAGCAGGCAGCCAAGGAGTTCGAAACGGAGCTGAAGAAAGAGTCTGATGATGGTGGCGACCAGCCCCCGC-CTCCAACCGAGACGGCGGTTAGC-GACGGTGGCGAGG---AGAAGGAGCTCGAGGCGTCC-AGTAG-CAAGGAGAGTACATGAGG-GCCAGTGGAGAATGGCGAGTTAGAATTGTGTATGTACAATTGTATGGATGGTGTGTTCCTTTGAGTAGCGGCACATTTCTCCCTCTCTTTTTGATGACGATCTTGCAGGTGATGTAGCGATGTTATTTGTACCCGGGAAAAAGAAGAACTTTATGTGAAAATACCATTATTATTTATGAGGATAATTGTGTACATCAAAAAGGTATGACCTCTATGCACTAACT]

[+] EMBL AK063673             [CGGCCGCTGCTTCGCCGCAATCCCCTTCTCCGCCTCCGCAGCTAAGCTAAGCTCGCCGCCACCGCCATGGGGATGGCTCCGGTCGCGACCTACCCGTCCTCCTCCTCCTCCTCCACCCTCGCGCGGCCTCCGTGTGCGGCTGCGGGGAGGGCGGCGGCGGCGGGCCGGGCACGCGTCGCGGCGGCCGGGATGTCCTCGAGGGCGTCCTCCTTCGTCACGGGAGGGGCGGGGGGGCTCGCCGTGGCGGTGGCCGCGCGGACGAGGGCGGGGTCGGGGGCGGGGTCGCGTGGGGGAGGCGCGATGGGGTGCAAGTGCCTGTTCGGGCTCGGCGTCCCGGAGCTGGTCGTCATCGCGGGCGTCGCCGCGCTGGTGTTCGGCCCCAAGCAGCTGCCCGAGATCGGCCGCAGCATCGGCAAGACCGTCAAGAGCTTCCAGCAGGCAGCCAAGGAGTTCGAAACGGAGCTGAAGAAAGAGTCTGATGATGGTGGCGACCAGCCCCCGC CTCCAACCGAGACGGCGGTTAGC GACGGTGGCGAGG   AGAAGGAGCTCGAGGCGTCC AGTAG CAAGGAGAGTACATGAGG GCCAGTGGAGAATGGCGAGTTAGAATTGTGTATGTACAATTGTATGGATGGTGTGTTCCTTTGAGTAGCGGCACATTTCTCCCTCTCTTTTTGATGACGATCTTGCAGGTGATGTAGCGATGTTATTTGTACCCGGGAAAAAGAAGAACTTTATGTGAAAATACCATTATTATTTATGAGG                                           ]
[+] EMBL AU197752             [                                        GCTAAGCTAAGCTCGCCGCCACCGCCATGGGGATGGCTCCGGTCGCGACCTACCCGTCCTCCTCCTCCTCCTCCACCCTCGCGCGGCCTCCGTGTGCGGCTGCGGGGAGGGCGGCGGCGGCGGGCCGGGCACGCGTCGCGGCGGCCGGGATGTCCTCGAGGGCGTCCTCCTTCGTCANGGGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU197753             [                                                                                                                                                                                                                                                                                                                                   GCTCGGCGTCCCGGAGCTGGTTGTCATCGCGGGCGTCTCCGCGCTGGTGTTCGGCCCCAANCAGCTGCCCGAGATCGGCCGCAGCATCGGCAAGACCGTCAAGAGCTTCCAGCAGGCAGCCAAGGAGTTNGAAACGGAGCTGAAGAAAGAGTNTGATGATGGTGGCGACCAGCCCCCGC CTCCAACCGAGACGGCGGTTANC GACGGTGGCGAGG   AGAAGGAGCTCGAGGCGTCC AGTAG CAAGGAGAGTACATGAGG GCCAGTGGAGAATGGCGAGTTAGAATTGTGTATGTACAATTGTATGGATGGTGTGTTCCTTTGAGTANCGGCACATTTCTCCCTCTCTTTTTGATGACGATCTTGCAGGTGATGTAGCGATGTTATTTGTACCCGGGAAAAAGAAGAACTTTATGTGAAAATACCNTTATTATTTATGAaaaa                                         ]
[+] EMBL BI801895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCCCCCGCACTCCAACCGAG CCGCGGTTAGCAGACGGTGGCGAGGAGAAGAAGGAGCTCGAGGCGTCCAAGTAGCCAAGGAGAGTACATGAGGCCCCAGTGGAGAATGGCGAGTTAGAATTGTGTATGTACAATTGTATGGATGGTGTGTTCCTTTGAGTA CGGCACATTTCTCCCTCTCTTTTTGATGACGATCTTGCAGGTGATGTA CGATGTTATTTGTACCCGGG AAAAGAAGAACTTTATGTGAAAATACCATTATTATTTATGAGGATAATTGTGTACATCAAAAA                       ]
[+] EMBL CF298789             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGCGTCC AGTAG CAAGGAGAGTACATGAGG GCCAGTGGAGAATGGCGAGTTAGAATTGTGTATGTACAATTGTATGGATGGTGTGTTCCTTTGAGTAGCGGCACATTTCTCCCTCTCTTTTTGATGACGATCTTGCAGGTGATGTAGCGATGTTATTTGTACCCGGGAAAAAGAAGAACTTTATGTGAAAATACCATTATTATTTATGAGGATAATTGTGTACATCAGTTTGGTATGACCTCTATGCACTAACT]


>consensus_7644#0 CGGCCGCTGCTTCGCCGCAATCCCCTTCTCCGCCTCCGCAGCTAAGCTAAGCTCGCCGCC ACCGCCATGGGGATGGCTCCGGTCGCGACCTACCCGTCCTCCTCCTCCTCCTCCACCCTC GCGCGGCCTCCGTGTGCGGCTGCGGGGAGGGCGGCGGCGGCGGGCCGGGCACGCGTCGCG GCGGCCGGGATGTCCTCGAGGGCGTCCTCCTTCGTCACGGGAGGGGCGGGGGGGCTCGCC GTGGCGGTGGCCGCGCGGACGAGGGCGGGGTCGGGGGCGGGGTCGCGTGGGGGAGGCGCG ATGGGGTGCAAGTGCCTGTTCGGGCTCGGCGTCCCGGAGCTGGTCGTCATCGCGGGCGTC GCCGCGCTGGTGTTCGGCCCCAAGCAGCTGCCCGAGATCGGCCGCAGCATCGGCAAGACC GTCAAGAGCTTCCAGCAGGCAGCCAAGGAGTTCGAAACGGAGCTGAAGAAAGAGTCTGAT GATGGTGGCGACCAGCCCCCGCCTCCAACCGAGACGGCGGTTAGCGACGGTGGCGAGGAG AAGGAGCTCGAGGCGTCCAGTAGCAAGGAGAGTACATGAGGGCCAGTGGAGAATGGCGAG TTAGAATTGTGTATGTACAATTGTATGGATGGTGTGTTCCTTTGAGTAGCGGCACATTTC TCCCTCTCTTTTTGATGACGATCTTGCAGGTGATGTAGCGATGTTATTTGTACCCGGGAA AAAGAAGAACTTTATGTGAAAATACCATTATTATTTATGAGGATAATTGTGTACATCAAA AAGGTATGACCTCTATGCACTAACT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)