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Oryza sativa
cluster # 7650 cluster # 7650       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7650#0 length = 1364 sequences # 5  

consensusID : consensus_7650#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1364
fasta sequence
                              [AATAAGTTCTGCACGTNCTTTTAATGATGGGAGCTCTCCTCGATTAGCTACACTGAGCTTCAGCAGTGATTCTNTTAGGAAACTGCTTTTCCACAGGAAAAAAATTGAGCAAGAAACAGGTGCACGGGTATCTGTTAGTGATGGTACAGTCACTATTGTAGCAAAAACCCAACCANTTATGGATAAGGCTATCGAGAAGGTAGAATTTCTTGTGGGTCGTGAAATTGAAGTTGGCAGAACGTACAAAGGTGTTGTTTCCTCAATAAAGGAGTACGGTGCTTTTNTGGGATTCAAT-GGTGGACAGCAAGGGCTACTTCATATTTCTGAGTTGTCACATGATAAGGTGTCTAAGGTCTCGGATGTTGTATCTGTTGGCCAAGTGCTCTCATTGACATGCATTGGACAGGACTTGAGGGGTAACATTAAACTTTCTCTTAAAGCTACCCTGCCCCATGCCCATGAAAAGAAGGATTTAGCAAGTAATCATACTGATCCTTTGCCAAGTCAAGAAGTTGTTGGCTGGACGGCTGTAGAGAACATGCCTAGCAAGGATGCTAATGCTGAACCATCCATCAGCAAAGACGAAGACAACATGATTGAGGAGACACCTGGGTGTTCTACTCCTGCAGTTATAATTCGAAGTGCTGCTGAATGTGATGCGCAAGATGTTACAAATGATCCTAAGAAGAAACGCCCAAAGGTTGCAAAGTCATCTCCTAAGCTATCTAAACCAGCCAGCGAAAGGCAGGAAGTTAAGAGAACTAGTGCTAAGAAAACTTCAGGTGCATCAACAACGGCCAAGAAAAATAAGAAAGAAAAAGCTGACTCTTCAAATGATGTGCTGGATGCCATTCCAGAACAAAATAAAAGTAACATCATGAACTATTCTAGTCCCTCAAACTTCAGGTCTGGGTCTATGAAGCTGGGTGACGTAGTTACAGCAAAGGTCTACCAGATACGAGCCTATGGATTAGTACTTGAGTTGAGTGATGGAGTTCGTGGAATGCATAAATTTGCGGAAAATGGACACAAGGATNTTTGAGGTCGGAGAAGAACTACTTGTGAAATGCTCAAGTTTCAATGCAAAGGGGAATTCCGGTCTTCTCATTGCTAGATTAGTAGCCATTTTGATGGGGCTAATGTCTTCTCTATAGGCCTACAGAAATAGACGCTTGTAAATGTGTAGCAGCTAATTCATCGACTTGAGGAACATGAGAAATAATACTGCGGCTCCCTCGACTTTTGTCAGAGTGCTACCAAATTGGTG-GGCTGTCGTTAGTAGTTTTGCCCTGCAACTCACAAACGCCCAAACATTACGCATCACTTGGTATCTGAATCTCTTTTGCAGCAGTTGTACAAAAAAA]

[+] EMBL OSC00412A            [AATAAGTTCTGCACGTNCTTTTAATGATGGGAGCTCTCCTCGATTAGCTACACTGAGCTTCAGCAGTGATTCTNTTAGGAAACTGCTTTTCCACAGGAAAAAAATTGAGCAAGAAACAGGTGCACGGGTATCTGTTAGTGATGGTACAGTCACTATTGTAGCAAAAACCCAACCANTTATGGATAAGGCTATCGAGAAGGTAGAATTTCTTGTGGGTCGTGAAATTGAAGTTGGCAGAACGTACAAAGGTGTTGTTTCCTCAATAAAGGAGTACGGTGCTTTTNTGGGATTCAATGGGTGGACAGCAAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK058997             [                                                                                                                                                           TTGTAGCAAAAACCCAACCAATTATGGATAAGGCTATCGAGAAGGTAGAATTTCTTGTGGGTCGTGAAATTGAAGTTGGCAGAACGTACAAAGGTGTTGTTTCCTCAATAAAGGAGTACGGTGCTTTTGTGGAATTCAAT GGTGGACAGCAAGGTCTACTTCATATTTCTGAGTTGTCACATGATAAGGTGTCTAAGGTCTCGGATGTTGTATCTGTTGGCCAAGTGCTCTCATTGACATGCATTGGACAGGACTTGAGGGGTAACATTAAACTTTCTCTTAAAGCTACCCTGCCCCATGCCCATGAAAAGAAGGATTTAGCAAGTAATCATACTGATCCTTTGCCAAGTCAAGAAGTTGTTGGCTGGACGGCTGTAGAGAACATGCCTAGCAAGGATGCTAATGCTGAACCATCCATCAGCAAAGACGAAGACAACATGATTGAGGAGACACCTGGGTGTTCTACTCCTGCAGTTATAATTCGAAGTGCTGCTGAATGTGATGCGCAAGATGTTACAAATGATCCTAAGAAGAAACGCCCAAAGGTTGCAAAGTCATCTCCTAAGCTATCTAAACCAGCCAGCGAAAGGCAGGAAGTTAAGAGAACTAGTGCTAAGAAAACTTCAGGTGCATCAACAACGGCCAAGAAAAATAAGAAAGAAAAAGCTGACTCTTCAAATGATGTGCTGGATGCCATTCCAGAACAAAATAAAAGTAACATCATGAACTATTCTAGTCCCTCAAACTTCAGGTCTGGGTCTATGAAGCTGGGTGACGTAGTTACAGCAAAGGTCTACCAGATACGAGCCTATGGATTAGTACTTGAGTTGAGTGATGGAGTTCGTGGAATGCATAAA                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OS1013A              [                                                                                                                                                                                                                                                                                                                                                      AGGTGTCTAAGGTCTCGGATGTTGTATCTGTTGGCCAAGTGCTCTCATTGACATGCATTGGACAGGACTTGAGGGGTAACATTAAACTNGCTCTTAAAGCTACCCTGCCCCATGCCCATGAAAAGAAGGATTTAGCAAGTAATCATACTGATCCTTTGCCAAGTCAAGAAGTTGTTGGCTGGACGGCTGTAGAGAACATGCCTAGCAAGGNTGCTAATGCTGAACCATCCATCAGCAAAGACGAAGACAACATGATTGAGGAGACACCTGGGTGTTCTACTCCTGCAGTTATAATTCGAAGTGCTGCTGAATGTGATGCGCAAGATGTTACANATGATCCTAAGAAGAAACGCCCAAAGGTTGCAAAGTCATCTCCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF328621             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAAGGTTGCAAAGTCATCTCCTAAGCTATCTAAACCAGCCAGCGAAAGGCAGGAAGTTAAGAGAACTAGTGCTAAGAAAACTTCAGGTGCATCAACAACGGCCAAGAAAAATAAGAAAGAAAAAGCTGACTCTTCAAATGATGTGCTGGATGCCATTCCAGAACAAAATAAAAGTAACATCATGAACTATTCTAGTCCCTCAAACTTCAGGTCTGGGTCTATGAAGCTGGGTGACGTAGTTACAGCAAAGGTCTACCAGATACGAGCCTATGGATTAGTACTTGAGTTGAGTGATGGAGTTCGTGGAATGCATAAATTTGCGGAAAATGGACACAAGGATNTTTGAGGTCGGAGAAGAACTACTTGTGAAATGCTCAAGTTTCAATGCAAAGGGGAATTCCGGTCTTCTCATTGCTAGATTAGTAGCCATTTTGATGGGGCTAATGTCTTCTCTATAGGCCTACAGAAATAGACGCTTGTAAATGTGTAGCAGCTAATTCATCGACTTGAGGAACATGAGAAATAATACTGCGGCTCCCTCGACTTTTGTCAGAGTGCTACCAAATTGGTG GGCTGTCGTTAGTAGTTTTGCCCTGCAACTCACAAACGCCCAAACATTACGCATCACTTGGTA                                  ]
[-] EMBL CF328620             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGAACTACTTGTGAAATGCTCAAGTTTCAATGCAAA GGGAATTCCGGTCTTCTCATTGCTAGATTAGTAGCCATTTTGATGGGGCTAATGTCTTCTCTATAGGCCTACAGAAATAGACGCTTGTAAATGTGTAGCAGCTAATTCATCGACTTGAGGAACATGAGAAATAATACTGCGGCTCCCTCGACTTTTGTCAGAGTGCTACCAAAATTGTGTGGCTGTCGTTAGTAGTTTTGCCCTGCAACTCACAAACGCCCAAACATTACGCATCACTTGGTATCTGAATCTCTTTTGCAGCAGTTGTACAAAAAAA]


>consensus_7650#0 AATAAGTTCTGCACGTNCTTTTAATGATGGGAGCTCTCCTCGATTAGCTACACTGAGCTT CAGCAGTGATTCTNTTAGGAAACTGCTTTTCCACAGGAAAAAAATTGAGCAAGAAACAGG TGCACGGGTATCTGTTAGTGATGGTACAGTCACTATTGTAGCAAAAACCCAACCANTTAT GGATAAGGCTATCGAGAAGGTAGAATTTCTTGTGGGTCGTGAAATTGAAGTTGGCAGAAC GTACAAAGGTGTTGTTTCCTCAATAAAGGAGTACGGTGCTTTTNTGGGATTCAATGGTGG ACAGCAAGGGCTACTTCATATTTCTGAGTTGTCACATGATAAGGTGTCTAAGGTCTCGGA TGTTGTATCTGTTGGCCAAGTGCTCTCATTGACATGCATTGGACAGGACTTGAGGGGTAA CATTAAACTTTCTCTTAAAGCTACCCTGCCCCATGCCCATGAAAAGAAGGATTTAGCAAG TAATCATACTGATCCTTTGCCAAGTCAAGAAGTTGTTGGCTGGACGGCTGTAGAGAACAT GCCTAGCAAGGATGCTAATGCTGAACCATCCATCAGCAAAGACGAAGACAACATGATTGA GGAGACACCTGGGTGTTCTACTCCTGCAGTTATAATTCGAAGTGCTGCTGAATGTGATGC GCAAGATGTTACAAATGATCCTAAGAAGAAACGCCCAAAGGTTGCAAAGTCATCTCCTAA GCTATCTAAACCAGCCAGCGAAAGGCAGGAAGTTAAGAGAACTAGTGCTAAGAAAACTTC AGGTGCATCAACAACGGCCAAGAAAAATAAGAAAGAAAAAGCTGACTCTTCAAATGATGT GCTGGATGCCATTCCAGAACAAAATAAAAGTAACATCATGAACTATTCTAGTCCCTCAAA CTTCAGGTCTGGGTCTATGAAGCTGGGTGACGTAGTTACAGCAAAGGTCTACCAGATACG AGCCTATGGATTAGTACTTGAGTTGAGTGATGGAGTTCGTGGAATGCATAAATTTGCGGA AAATGGACACAAGGATNTTTGAGGTCGGAGAAGAACTACTTGTGAAATGCTCAAGTTTCA ATGCAAAGGGGAATTCCGGTCTTCTCATTGCTAGATTAGTAGCCATTTTGATGGGGCTAA TGTCTTCTCTATAGGCCTACAGAAATAGACGCTTGTAAATGTGTAGCAGCTAATTCATCG ACTTGAGGAACATGAGAAATAATACTGCGGCTCCCTCGACTTTTGTCAGAGTGCTACCAA ATTGGTGGGCTGTCGTTAGTAGTTTTGCCCTGCAACTCACAAACGCCCAAACATTACGCA TCACTTGGTATCTGAATCTCTTTTGCAGCAGTTGTACAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)