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Oryza sativa
cluster # 7671 cluster # 7671       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7671#0 length = 2287 sequences # 3  
consensus_7671#1 length = 796 sequences # 2  

consensusID : consensus_7671#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2287
fasta sequence
                              [GATTCCCAAGCCAACCACTTTTTTACCTTTCCCCTTTCCCGGTGCTTCTCTCTCCCATTTTCCCCTTTTACTGGTGTTGAGCCGAAGCGGAGAGGAGGCGGCGTCGTCAGGCTCGTCCTTGCTTCAAGCGGTGGTGACGACGGCGCCACGGATCTGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGATCTGGAGTGGAGCGACGTGGGAGGACGACGCCACCGCCGCTCGAGATCCGCAACCGGGGCGATGGCCGGCGGTGTTGTCGACGGGTTGACGATGGCGTCGTCACGGGCTGACGGGAGGGAGGCGCGGTCGTCAGCGGCGGCGGTGACGTGGTCGTGGCGTGCCCCGGTGGCGACTCCACCAGCTGCACGAGCTCCCCCGGTCGGTGCCCCTCCTCTCCATTCATGGCGGCACCCGATTACTCTCCCCTCAACCCTCAGTGGCACCGGCGCCAACACCGTCTCGCGCGCGGAGAAGCCTAGAAGGCCGGCGGTCGAGGAGCTCCCCCGGCGACGCGGCGATGAGCATCGAGCGGAGCAGCGGGCGGGCCTTCTCGACACGGAGCAGCGACAGCGTCCTCTGGCATCTTCAGCAAGCGCCGAGCGGAGCAGCAAGGGGCCATCTCGACGCAGAGCGGTGGCGGTCCGGAACTCCCTCGTTCCGAGCGGTGACGGTGACGGCCGCATCAGCGCCGCCGGATTTTCTCAGGTGGGGGACTTGGATGAGGCTTCACCAGCTTGGGAGAACAACGGCGGCCACACTAGTCGGCGCTACAACATCTCCCAACTCTTCTCCTCACCGAGTCCTCACCAAGTGGGTCCTGTGCCAGAGTTTTTTTGCGCGAGGTGTTCGTTCCTTTGGCTGTGTTTAGATTCAAAGTTTGTATCTAAACTTTAAACTTCAGTCCTTTTTCATCATATTAACTTGTCATATACCCATAACTTTTTAGTCATATCATTTTTAATTTCAACCAAAATCTAAACTTTGTGCTAAACTAAACACAGCCTTTGTTGAGATACGGAGAACCCAACGTAGCTATAGACCCCACTGCTTTTTCCATCACGTAGACGAATTCACGCGCTACGTAGGAGCACTATCAGCGTAGGTGTTTCTCAGGCATCCTTTCCCCTAGGCTGTCGGGGAGACCGCAGAGGGTATGCAAGAAGTGTCTGACTTGGTGGGCACTATTATGTCCTTTGTTAATACGAGGAGAAGAGAGTGTTATTGATTGTGTTAAACATATCTAGTAGACCACTCTAAAACTATAATTTTGGAGATAAATTATTAAGCTAAAATTATATACTCTTCTAAAAAAGATAGAGTAATCAACAAGGACATGGAGTATTTTAAAAAAGAGCATTGTCGCCGTTAATTACGGTCATGATCCGCTTCAAGAGGAGAGGGTCCAAGAGTGTCCCAGCCTTGGCCCATCTTATCCCTTATTTACAGCTACTCCAGGACCAGCAGAGGATCAGGAGAGGAGACACGTATGTACACATATCTACACGTGGGCCCCACGCAGATGAGCTGCCACGTACTCCACTCCATGCTCGATTTGAATCCATTCTCCAAAGAAAGGGATTTAATTAATCAACCAGTACATTTTCATTGGCGAGTGAATAATAAATTATTATTATTATATGATGAATCAAGCATCTTGATCTTCCCCAAATCGTCGTGCTTGATATCTTCTGCTTTTCGTTTCATTTGTGCTAATTAATCTACGTGCGCGCGCGCGTACGGCTGGGCTGATCGATGATTCGATCGATCAGTACGCGAAGCCACCGGCGCCGGTTTGCTCGCGCGGTACGGCCGCCCGCCGCCGGCCGGCGCGCACCGCGGCGCAGTTGCCGCCGGCGGCGGCGGCGTCCTCGTCCATGAAGATCTGCTTGCACCGGCAATCCACGCTGCAGAACGCTCTGTCCCCTCTGTACATGTAGATGTCCTTGCCGTCGGCGAGCTCCCTGCGGCAGAGGAAGCAGCGCTGCAAGAAGGAGCTCATCGTCGCCGTCGTCGCAGTCGCCGGAGAGGAGGAGGACATCGTCTCTGGGTGGCTATGGAGGGTGGCCTTGCTGATGATTTGGGGAGGCCTCATGTTGGGGTGGTGATCGTTCTTGTGTGTCTCAAGAAGGACACTCAGGCCGGCCATGGAAGAACACACACCAACTTAAAACCAAAGACGATGAAAATTAATAGTCAAAATCTCTGTGTGTGTGTGTGTGTGGTTGAGCTCTTGTGCTCTCCTATGGCATCAAGCTCTTCTTTTGTTTTTTTGTTGGG]

[+] EMBL AK107229             [GATTCCCAAGCCAACCACTTTTTTACCTTTCCCCTTTCCCGGTGCTTCTCTCTCCCATTTTCCCCTTTTACTGGTGTTGAGCCGAAGCGGAGAGGAGGCGGCGTCGTCAGGCTCGTCCTTGCTTCAAGCGGTGGTGACGACGGCGCCACGGATCTGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGATCTGGAGTGGAGCGACGTGGGAGGACGACGCCACCGCCGCTCGAGATCCGCAACCGGGGCGATGGCCGGCGGTGTTGTCGACGGGTTGACGATGGCGTCGTCACGGGCTGACGGGAGGGAGGCGCGGTCGTCAGCGGCGGCGGTGACGTGGTCGTGGCGTGCCCCGGTGGCGACTCCACCAGCTGCACGAGCTCCCCCGGTCGGTGCCCCTCCTCTCCATTCATGGCGGCACCCGATTACTCTCCCCTCAACCCTCAGTGGCACCGGCGCCAACACCGTCTCGCGCGCGGAGAAGCCTAGAAGGCCGGCGGTCGAGGAGCTCCCCCGGCGACGCGGCGATGAGCATCGAGCGGAGCAGCGGGCGGGCCTTCTCGACACGGAGCAGCGACAGCGTCCTCTGGCATCTTCAGCAAGCGCCGAGCGGAGCAGCAAGGGGCCATCTCGACGCAGAGCGGTGGCGGTCCGGAACTCCCTCGTTCCGAGCGGTGACGGTGACGGCCGCATCAGCGCCGCCGGATTTTCTCAGGTGGGGGACTTGGATGAGGCTTCACCAGCTTGGGAGAACAACGGCGGCCACACTAGTCGGCGCTACAACATCTCCCAACTCTTCTCCTCACCGAGTCCTCACCAAGTGGGTCCTGTGCCAGAGTTTTTTTGCGCGAGGTGTTCGTTCCTTTGGCTGTGTTTAGATTCAAAGTTTGTATCTAAACTTTAAACTTCAGTCCTTTTTCATCATATTAACTTGTCATATACCCATAACTTTTTAGTCATATCATTTTTAATTTCAACCAAAATCTAAACTTTGTGCTAAACTAAACACAGCCTTTGTTGAGATACGGAGAACCCAACGTAGCTATAGACCCCACTGCTTTTTCCATCACGTAGACGAATTCACGCGCTACGTAGGAGCACTATCAGCGTAGGTGTTTCTCAGGCATCCTTTCCCCTAGGCTGTCGGGGAGACCGCAGAGGGTATGCAAGAAGTGTCTGACTTGGTGGGCACTATTATGTCCTTTGTTAATACGAGGAGAAGAGAGTGTTATTGATTGTGTTAAACATATCTAGTAGACCACTCTAAAACTATAATTTTGGAGATAAATTATTAAGCTAAAATTATATACTCTTCTAAAAAAGATAGAGTAATCAACAAGGACATGGAGTATTTTAAAAAAGAGCATTGTCGCCGTTAATTACGGTCATGATCCGCTTCAAGAGGAGAGGGTCCAAGAGTGTCCCAGCCTTGGCCCATCTTATCCCTTATTTACAGCTACTCCAGGACCAGCAGAGGATCAGGAGAGGAGACACGTATGTACACATATCTACACGTGGGCCCCACGCAGATGAGCTGCCACGTACTCCACTCCATGCTCGATTTGAATCCATTCTCCAAAGAAAGGGATTTAATTAATCAACCAGTACATTTTCATTGGCGAGTGAATAATAAATTATTATTATTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK108162             [                                 CTTTCCCGGTGCTTCTCTCTCCCATTTTCCCCTTTTACTGGTGTTGAGCCGAAGCGGAGAGGAGGCGGCGTCGTCAGGCTCGTCCTTGCTTCAAGCGGTGGTGACGACGGCGCCACGGATCTGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGATCTGGAGTGGAGCGGCGTGGGAGGACGACGCCACCGCCGCTCGAGATCCGCAACCGGGGCGATGGCCGGCGGTGTTGTCGACGGGTTGACGATGGCGTCGTCACGGGCTGACGGGAGGGAGGCGCGGTCGTCAGCGGCGGCGGTGACGTGGTCGTGGCGTGCCCCGGTGGCGACTCCACCAGCTGCACGAGCTCCCCCGGTCGGTGCCCCTCCTCTCCATTCATGGCGGCACCCGATTACTCTCCCCTCAACCCTCAGTGGCACCGGCGCCAACACCGTCTCGCGCGCGGAGAAGCCTAGAAGGCCGGCGGTCGAGGAGCTCCCCCGGCGACGCGGCGATGAGCATCGAGCGGAGCAGCGGGCGGGCCTTCTCGACACGGAGCAGCGACAGCGTCCTCTGGCATCTTCAGCAAGCGCCGAGCGGAGCAGCAAGGGGCCATCTCGACGCAGAGCGGTGGCGGTCCGGAACTCCTTCGTTCCGAGCGGTGACGGTGACGGCCGCATCAGCGCCGCCGGATTTTCTCAGGTGGGGGACTTGGATGAGGCTTCACCAGCTTGGGAGAACAACGGCGGCCACACTAGTCGGCGCTACAACATCTCCCAACTCTTCTCCTCACCGAGTCCTCACCAAGTGGGTCCTGTGCCAGAG TTTTTTGCGCGAGGTGTTCGTTCCTTTGGCTGTGTTTAGATTCAAAGTTTGTATCTAAACTTTAAACTTCAGTCCTTTTTCATCATATTAACTTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AK107707             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGATTTAATTAATCAACCAGTACATTTTCATTGGCGAGTGAATAATAAATTATTATTATTATATGATGAATCAAGCATCTTGATCTTCCCCAAATCGTCGTGCTTGATATCTTCTGCTTTTCGTTTCATTTGTGCTAATTAATCTACGTGCGCGCGCGCGTACGGCTGGGCTGATCGATGATTCGATCGATCAGTACGCGAAGCCACCGGCGCCGGTTTGCTCGCGCGGTACGGCCGCCCGCCGCCGGCCGGCGCGCACCGCGGCGCAGTTGCCGCCGGCGGCGGCGGCGTCCTCGTCCATGAAGATCTGCTTGCACCGGCAATCCACGCTGCAGAACGCTCTGTCCCCTCTGTACATGTAGATGTCCTTGCCGTCGGCGAGCTCCCTGCGGCAGAGGAAGCAGCGCTGCAAGAAGGAGCTCATCGTCGCCGTCGTCGCAGTCGCCGGAGAGGAGGAGGACATCGTCTCTGGGTGGCTATGGAGGGTGGCCTTGCTGATGATTTGGGGAGGCCTCATGTTGGGGTGGTGATCGTTCTTGTGTGTCTCAAGAAGGACACTCAGGCCGGCCATGGAAGAACACACACCAACTTAAAACCAAAGACGATGAAAATTAATAGTCAAAATCTCTGTGTGTGTGTGTGTGTGGTTGAGCTCTTGTGCTCTCCTATGGCATCAAGCTCTTCTTTTGTTTTTTTGTTGGG]


>consensus_7671#0 GATTCCCAAGCCAACCACTTTTTTACCTTTCCCCTTTCCCGGTGCTTCTCTCTCCCATTT TCCCCTTTTACTGGTGTTGAGCCGAAGCGGAGAGGAGGCGGCGTCGTCAGGCTCGTCCTT GCTTCAAGCGGTGGTGACGACGGCGCCACGGATCTGGAGCGGCGGCGGCGGCGGCGGCGG CGGCGCGGATCTGGAGTGGAGCGACGTGGGAGGACGACGCCACCGCCGCTCGAGATCCGC AACCGGGGCGATGGCCGGCGGTGTTGTCGACGGGTTGACGATGGCGTCGTCACGGGCTGA CGGGAGGGAGGCGCGGTCGTCAGCGGCGGCGGTGACGTGGTCGTGGCGTGCCCCGGTGGC GACTCCACCAGCTGCACGAGCTCCCCCGGTCGGTGCCCCTCCTCTCCATTCATGGCGGCA CCCGATTACTCTCCCCTCAACCCTCAGTGGCACCGGCGCCAACACCGTCTCGCGCGCGGA GAAGCCTAGAAGGCCGGCGGTCGAGGAGCTCCCCCGGCGACGCGGCGATGAGCATCGAGC GGAGCAGCGGGCGGGCCTTCTCGACACGGAGCAGCGACAGCGTCCTCTGGCATCTTCAGC AAGCGCCGAGCGGAGCAGCAAGGGGCCATCTCGACGCAGAGCGGTGGCGGTCCGGAACTC CCTCGTTCCGAGCGGTGACGGTGACGGCCGCATCAGCGCCGCCGGATTTTCTCAGGTGGG GGACTTGGATGAGGCTTCACCAGCTTGGGAGAACAACGGCGGCCACACTAGTCGGCGCTA CAACATCTCCCAACTCTTCTCCTCACCGAGTCCTCACCAAGTGGGTCCTGTGCCAGAGTT TTTTTGCGCGAGGTGTTCGTTCCTTTGGCTGTGTTTAGATTCAAAGTTTGTATCTAAACT TTAAACTTCAGTCCTTTTTCATCATATTAACTTGTCATATACCCATAACTTTTTAGTCAT ATCATTTTTAATTTCAACCAAAATCTAAACTTTGTGCTAAACTAAACACAGCCTTTGTTG AGATACGGAGAACCCAACGTAGCTATAGACCCCACTGCTTTTTCCATCACGTAGACGAAT TCACGCGCTACGTAGGAGCACTATCAGCGTAGGTGTTTCTCAGGCATCCTTTCCCCTAGG CTGTCGGGGAGACCGCAGAGGGTATGCAAGAAGTGTCTGACTTGGTGGGCACTATTATGT CCTTTGTTAATACGAGGAGAAGAGAGTGTTATTGATTGTGTTAAACATATCTAGTAGACC ACTCTAAAACTATAATTTTGGAGATAAATTATTAAGCTAAAATTATATACTCTTCTAAAA AAGATAGAGTAATCAACAAGGACATGGAGTATTTTAAAAAAGAGCATTGTCGCCGTTAAT TACGGTCATGATCCGCTTCAAGAGGAGAGGGTCCAAGAGTGTCCCAGCCTTGGCCCATCT TATCCCTTATTTACAGCTACTCCAGGACCAGCAGAGGATCAGGAGAGGAGACACGTATGT ACACATATCTACACGTGGGCCCCACGCAGATGAGCTGCCACGTACTCCACTCCATGCTCG ATTTGAATCCATTCTCCAAAGAAAGGGATTTAATTAATCAACCAGTACATTTTCATTGGC GAGTGAATAATAAATTATTATTATTATATGATGAATCAAGCATCTTGATCTTCCCCAAAT CGTCGTGCTTGATATCTTCTGCTTTTCGTTTCATTTGTGCTAATTAATCTACGTGCGCGC GCGCGTACGGCTGGGCTGATCGATGATTCGATCGATCAGTACGCGAAGCCACCGGCGCCG GTTTGCTCGCGCGGTACGGCCGCCCGCCGCCGGCCGGCGCGCACCGCGGCGCAGTTGCCG CCGGCGGCGGCGGCGTCCTCGTCCATGAAGATCTGCTTGCACCGGCAATCCACGCTGCAG AACGCTCTGTCCCCTCTGTACATGTAGATGTCCTTGCCGTCGGCGAGCTCCCTGCGGCAG AGGAAGCAGCGCTGCAAGAAGGAGCTCATCGTCGCCGTCGTCGCAGTCGCCGGAGAGGAG GAGGACATCGTCTCTGGGTGGCTATGGAGGGTGGCCTTGCTGATGATTTGGGGAGGCCTC ATGTTGGGGTGGTGATCGTTCTTGTGTGTCTCAAGAAGGACACTCAGGCCGGCCATGGAA GAACACACACCAACTTAAAACCAAAGACGATGAAAATTAATAGTCAAAATCTCTGTGTGT GTGTGTGTGTGGTTGAGCTCTTGTGCTCTCCTATGGCATCAAGCTCTTCTTTTGTTTTTT TGTTGGG



consensusID : consensus_7671#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 796
fasta sequence
                              [AAAGCAACACAGCGCGCACCTGAACATCAACGGGATGGTCCGNNTNGNGGCAAGGNNCTCGNGCCTTNTTTTGGAATTTNTNNTTTNNNTNTTNTTTTNTTTTCCTCCAAAGAAAGGGATTTAATTAATCAACCAGTACATTTTCATTGGCGAGTGAATAATAAATTATTATTATTATATGATGAATCAAGCATCTTGATCTTCCCCAAATCGTCGTGCTTGATATCTTCTGCTTTTCGTTTCATTTGTGCTAATTAATCTACGTGCGCGCGCGCGTACGGCTGGGCTGATCGATGATTCGATCGATCAGTACGCGAAGCCACCGGCGCCGGTTTGCTCGCGCGGTACGGCCGCCCGCCGCCGGCCGGCGCGCACCGCGGCGCAGTTGCCGCCGGCGGCGGCGGCGTCCTCGTCCATGAAGATCTGCTTGCACCGGCAATCCACGCTGCAGAACGCTCTGTCCCCTCTGTACATGTAGATGTCCTTGCCGTCGGCGAGCTCCCTGCGGCAGAGGAAGCAGCGCTGCAAGAAGGAGCTCATCGTCGCCGTCGTCGCAGTCGCCGGAGAGGAGGAGGACATCGTCTCTGGGTGGCTATGGAGGGTGGCCTTGCTGATGATTTGGGGAGGCCTCATGTTGGGGTGGTGATCGTTCTTGTGTGTCTCAAGAAGGACACTCAGGCCGGCCATGGAAGAACACACACCAACTTAAAACCAAAGACGATGAAAATTAATAGTCAAAATCTCTGTGTGTGTGTGTGTGTGGTTGAGCTCTTGTGCTCTCCTATGGCATCAAGCT]

[-] EMBL CA755588             [AAAGCAACACAGCGCGCACCTGAACATCAACGGGATGGTCCGNNTNGNGGCAAGGNNCTCGNGCCTTNTTTTGGAATTTNTNNTTTNNNTNTTNTTTTNTTTTCCTCCAAAGAAAGGGATTTAATTAATCAACCAGTACATTTTCATTGGCGAGTGAATAATAAATTATTATTATTATATGATGAATCAAGCATCTTGATCTTCCCCAAATCGTCGTGCTTGATATCTTCTGCTTTTCGTTTCATTTGTGCTAATTAATCTACGTGCGCGCGCGCGTACGGCTGGGCTGATCGATGATTCGATCGATCAGTACGCGAAGCCACCGGCGCCGGTTTGCTCGCGCGGTACGGCCGCCCGCCGCCGGCCGGCGCGCACCGCGGCGCAGTTGCCGCCGGCGGCGGCGGCGTCCTCGTCCATGAAGATCTGCTTGCACCGGCAATCCACGCTGCAGAACGCTCTGTCCCCTCTGTACATGTAGATGTCCTTGCCGTCGGCGAGCTCCCTGCGGCAGAGGAAGCAGCGCTGCAAGAAGGAGCTCATCGTCGCCGTCGTCGCAGTCGCCGGAGAGGAGGAGGACATCGTCTCTGGGTGGCTATGGAGGGTGGCCTTGCTGATGATTTGGGGAGGCCTCATGTTGGGGTGGTGATCGTTCTTGTGTGTCTCAAGAAGGACACTCAGGCCGGCCATGGAAGAACACACACCAACTTAAAACCAAAGACGATGAAAATTAATAGTCAAAATCTCTGTGTGTGTGTGTGTGTGGTTGAGCTCTTGTGCTCTCCTATGGCATCAAGCT]
[-] EMBL BE040636             [AAAGCAACACAGCGCGCACCTGAACATCAACGGGATGGTCCGNNTNGNGGCAAGGNNCTCGNGCCTTNTTTTGGAATTTNTNNTTTNNNTNTTNTTTTNTTTTCCTCCAAAGAAAGGGATTTAATTAATCAACCAGTACATTTTCATTGGCGAGTGAATAATAAATTATTATTATTATATGATGAATCAAGCATCTTGATCTTCCCCAAATCGTCGTGCTTGATATCTTCTGCTTTTCGTTTCATTTGTGCTAATTAATCTACGTGCGCGCGCGCGTACGGCTGGGCTGATCGATGATTCGATCGATCAGTACGCGAAGCCACCGGCGCCGGTTTGCTCGCGCGGTACGGCCGCCCGCCGCCGGCCGGCGCGCACCGCGGCGCAGTTGCCGCCGCCGGCGGCGGCGTCCTCGTCCATGAAGATCTGCTTGCACCGGCAATCCACGCTGCAGAACGCTCTGTCCCCTCTGTACATGTAGATGTCCTTGCCGTCGGCGAGCTCCCTGCGGCAGAGGAAGCAGCGCTGCAAGAAGGAGCTCATCGTCGCCGTCGTCGCAGTCGCCGGAGAGGAGGAGGACATCGTCTCTGGGTGGCTATGGAGGGTGGCCTTGCTGATGATTTGGGGAGGCCTCATGTTGAAAAGGTGATCGTTCTTGTGTGTCTCAAGAAGGACACTCAGGCCGGCCATGGAAGAACACACACCAACTTAAAACCAAAGACGATGAAAATTAATAGTCAAAATCTCTGTGTGTGTGTGTGTGTGGTTGAGCTCTTGTGCTC                 ]


>consensus_7671#1 AAAGCAACACAGCGCGCACCTGAACATCAACGGGATGGTCCGNNTNGNGGCAAGGNNCTC GNGCCTTNTTTTGGAATTTNTNNTTTNNNTNTTNTTTTNTTTTCCTCCAAAGAAAGGGAT TTAATTAATCAACCAGTACATTTTCATTGGCGAGTGAATAATAAATTATTATTATTATAT GATGAATCAAGCATCTTGATCTTCCCCAAATCGTCGTGCTTGATATCTTCTGCTTTTCGT TTCATTTGTGCTAATTAATCTACGTGCGCGCGCGCGTACGGCTGGGCTGATCGATGATTC GATCGATCAGTACGCGAAGCCACCGGCGCCGGTTTGCTCGCGCGGTACGGCCGCCCGCCG CCGGCCGGCGCGCACCGCGGCGCAGTTGCCGCCGGCGGCGGCGGCGTCCTCGTCCATGAA GATCTGCTTGCACCGGCAATCCACGCTGCAGAACGCTCTGTCCCCTCTGTACATGTAGAT GTCCTTGCCGTCGGCGAGCTCCCTGCGGCAGAGGAAGCAGCGCTGCAAGAAGGAGCTCAT CGTCGCCGTCGTCGCAGTCGCCGGAGAGGAGGAGGACATCGTCTCTGGGTGGCTATGGAG GGTGGCCTTGCTGATGATTTGGGGAGGCCTCATGTTGGGGTGGTGATCGTTCTTGTGTGT CTCAAGAAGGACACTCAGGCCGGCCATGGAAGAACACACACCAACTTAAAACCAAAGACG ATGAAAATTAATAGTCAAAATCTCTGTGTGTGTGTGTGTGTGGTTGAGCTCTTGTGCTCT CCTATGGCATCAAGCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7671#0      GATTCCCAAGCCAACCACTTTTTTACCTTTCCCCTTTCCCGGTGCTTCTCTCTCCCATTT 60
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      TCCCCTTTTACTGGTGTTGAGCCGAAGCGGAGAGGAGGCGGCGTCGTCAGGCTCGTCCTT 120
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      GCTTCAAGCGGTGGTGACGACGGCGCCACGGATCTGGAGCGGCGGCGGCGGCGGCGGCGG 180
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      CGGCGCGGATCTGGAGTGGAGCGACGTGGGAGGACGACGCCACCGCCGCTCGAGATCCGC 240
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      AACCGGGGCGATGGCCGGCGGTGTTGTCGACGGGTTGACGATGGCGTCGTCACGGGCTGA 300
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      CGGGAGGGAGGCGCGGTCGTCAGCGGCGGCGGTGACGTGGTCGTGGCGTGCCCCGGTGGC 360
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      GACTCCACCAGCTGCACGAGCTCCCCCGGTCGGTGCCCCTCCTCTCCATTCATGGCGGCA 420
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      CCCGATTACTCTCCCCTCAACCCTCAGTGGCACCGGCGCCAACACCGTCTCGCGCGCGGA 480
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      GAAGCCTAGAAGGCCGGCGGTCGAGGAGCTCCCCCGGCGACGCGGCGATGAGCATCGAGC 540
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      GGAGCAGCGGGCGGGCCTTCTCGACACGGAGCAGCGACAGCGTCCTCTGGCATCTTCAGC 600
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      AAGCGCCGAGCGGAGCAGCAAGGGGCCATCTCGACGCAGAGCGGTGGCGGTCCGGAACTC 660
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      CCTCGTTCCGAGCGGTGACGGTGACGGCCGCATCAGCGCCGCCGGATTTTCTCAGGTGGG 720
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      GGACTTGGATGAGGCTTCACCAGCTTGGGAGAACAACGGCGGCCACACTAGTCGGCGCTA 780
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      CAACATCTCCCAACTCTTCTCCTCACCGAGTCCTCACCAAGTGGGTCCTGTGCCAGAGTT 840
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      TTTTTGCGCGAGGTGTTCGTTCCTTTGGCTGTGTTTAGATTCAAAGTTTGTATCTAAACT 900
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      TTAAACTTCAGTCCTTTTTCATCATATTAACTTGTCATATACCCATAACTTTTTAGTCAT 960
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      ATCATTTTTAATTTCAACCAAAATCTAAACTTTGTGCTAAACTAAACACAGCCTTTGTTG 1020
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      AGATACGGAGAACCCAACGTAGCTATAGACCCCACTGCTTTTTCCATCACGTAGACGAAT 1080
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      TCACGCGCTACGTAGGAGCACTATCAGCGTAGGTGTTTCTCAGGCATCCTTTCCCCTAGG 1140
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      CTGTCGGGGAGACCGCAGAGGGTATGCAAGAAGTGTCTGACTTGGTGGGCACTATTATGT 1200
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      CCTTTGTTAATACGAGGAGAAGAGAGTGTTATTGATTGTGTTAAACATATCTAGTAGACC 1260
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      ACTCTAAAACTATAATTTTGGAGATAAATTATTAAGCTAAAATTATATACTCTTCTAAAA 1320
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      AAGATAGAGTAATCAACAAGGACATGGAGTATTTTAAAAAAGAGCATTGTCGCCGTTAAT 1380
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      TACGGTCATGATCCGCTTCAAGAGGAGAGGGTCCAAGAGTGTCCCAGCCTTGGCCCATCT 1440
consensus_7671#1      ------------------------------------------------------------
                                                                                  

consensus_7671#0      TATCCCTTATTTACAGCTACTCCAGGACCAGCAGAGGATCAGGAGAGGAGACACGTATGT 1500
consensus_7671#1      ------------AAAGCAACACAGCGCGCACCTGAACATCAAC-GGGATGGTCCGNNTNG 47
                                  * *** ** *   *  ** * **  ****   * *  *   **  *  

consensus_7671#0      ACACATATCTACACGTGGGCCCCACGCAGATGAGCTGCCACGTACTCCACTCCATGCTCG 1560
consensus_7671#1      NGGCAAG---GNNCTCGNGCCTTNTTTTG--GAATT----TNTNNTTTNNNTNTTNTTTT 98
                         **        *  * ***       *  **  *      *  *        *  *  

consensus_7671#0      ATTTGAATCCATTCTCCAAAGAAAGGGATTTAATTAATCAACCAGTACATTTTCATTGGC 1620
consensus_7671#1      NTTT-------TCCTCCAAAGAAAGGGATTTAATTAATCAACCAGTACATTTTCATTGGC 151
                       ***       * ***********************************************

consensus_7671#0      GAGTGAATAATAAATTATTATTATTATATGATGAATCAAGCATCTTGATCTTCCCCAAAT 1680
consensus_7671#1      GAGTGAATAATAAATTATTATTATTATATGATGAATCAAGCATCTTGATCTTCCCCAAAT 211
                      ************************************************************

consensus_7671#0      CGTCGTGCTTGATATCTTCTGCTTTTCGTTTCATTTGTGCTAATTAATCTACGTGCGCGC 1740
consensus_7671#1      CGTCGTGCTTGATATCTTCTGCTTTTCGTTTCATTTGTGCTAATTAATCTACGTGCGCGC 271
                      ************************************************************

consensus_7671#0      GCGCGTACGGCTGGGCTGATCGATGATTCGATCGATCAGTACGCGAAGCCACCGGCGCCG 1800
consensus_7671#1      GCGCGTACGGCTGGGCTGATCGATGATTCGATCGATCAGTACGCGAAGCCACCGGCGCCG 331
                      ************************************************************

consensus_7671#0      GTTTGCTCGCGCGGTACGGCCGCCCGCCGCCGGCCGGCGCGCACCGCGGCGCAGTTGCCG 1860
consensus_7671#1      GTTTGCTCGCGCGGTACGGCCGCCCGCCGCCGGCCGGCGCGCACCGCGGCGCAGTTGCCG 391
                      ************************************************************

consensus_7671#0      CCGGCGGCGGCGGCGTCCTCGTCCATGAAGATCTGCTTGCACCGGCAATCCACGCTGCAG 1920
consensus_7671#1      CCGGCGGCGGCGGCGTCCTCGTCCATGAAGATCTGCTTGCACCGGCAATCCACGCTGCAG 451
                      ************************************************************

consensus_7671#0      AACGCTCTGTCCCCTCTGTACATGTAGATGTCCTTGCCGTCGGCGAGCTCCCTGCGGCAG 1980
consensus_7671#1      AACGCTCTGTCCCCTCTGTACATGTAGATGTCCTTGCCGTCGGCGAGCTCCCTGCGGCAG 511
                      ************************************************************

consensus_7671#0      AGGAAGCAGCGCTGCAAGAAGGAGCTCATCGTCGCCGTCGTCGCAGTCGCCGGAGAGGAG 2040
consensus_7671#1      AGGAAGCAGCGCTGCAAGAAGGAGCTCATCGTCGCCGTCGTCGCAGTCGCCGGAGAGGAG 571
                      ************************************************************

consensus_7671#0      GAGGACATCGTCTCTGGGTGGCTATGGAGGGTGGCCTTGCTGATGATTTGGGGAGGCCTC 2100
consensus_7671#1      GAGGACATCGTCTCTGGGTGGCTATGGAGGGTGGCCTTGCTGATGATTTGGGGAGGCCTC 631
                      ************************************************************

consensus_7671#0      ATGTTGGGGTGGTGATCGTTCTTGTGTGTCTCAAGAAGGACACTCAGGCCGGCCATGGAA 2160
consensus_7671#1      ATGTTGGGGTGGTGATCGTTCTTGTGTGTCTCAAGAAGGACACTCAGGCCGGCCATGGAA 691
                      ************************************************************

consensus_7671#0      GAACACACACCAACTTAAAACCAAAGACGATGAAAATTAATAGTCAAAATCTCTGTGTGT 2220
consensus_7671#1      GAACACACACCAACTTAAAACCAAAGACGATGAAAATTAATAGTCAAAATCTCTGTGTGT 751
                      ************************************************************

consensus_7671#0      GTGTGTGTGTGGTTGAGCTCTTGTGCTCTCCTATGGCATCAAGCTCTTCTTTTGTTTTTT 2280
consensus_7671#1      GTGTGTGTGTGGTTGAGCTCTTGTGCTCTCCTATGGCATCAAGCT--------------- 796
                      *********************************************               

consensus_7671#0      TGTTGGG 2287
consensus_7671#1      -------
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)