cluster # 7688

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7688 cluster # 7688 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7688#0 length = 1417 sequences # 5
consensusID : consensus_7688#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1417
fasta sequence
                              [CCTTCGTCCCCTTTCCCCTCTCCCATCCCCATGGCGGACAACGCCGCCGCCGCCGCCGACAGCGCGGCGCGGACGAGGTACGCGAGGGGCCAGCTCGAGGCGCTGAGGGCCGCCCCGTCGGAGGAGGCGCAGGCGCGGCTATGGGCCGAGGTGTCCGCCGCCCTCGCCGCCGCCGGCTTCTCCGGCGAGTACGACGGGCTGATGGACGCAGAGGATCCGTCGATTAGGAAGCCGGGGAGGAAGGGGAAGAAGGCCGCCGGGGGCGGGTGGAAGAGGCACGACGCGGCGGCGGCGACCCAATTCCTGGAAACGGATGAGGTTGGTGCCTGGAGGAATGGGGATTCAGGGGTCCGCTACGAGCATTACGTGGATGAGCCTCGTTCCGTGCTTCAAGTGATTGAGGAGCCATTTGTTCAGGGTGGAAATGCGGAGTACGAAGATGCTGACAGCGATGATGATTATGATGGAATTTTGAAGCCCGCCTTCGCAGTTGATGGGGATCCCGATTTCGAGTCGGGTGAGCCGCTCGATGGCTTTGAGTACCTTCGGCGTGTCAGGTGGGAAGCTAACCAAATTCCCAGAGTGAAGGTGGCGAAGATAGATTTGAATACGGCTAGAAATGAACAGACGCCTTACATGCCAGAAATTCCTGATATAGCAAAGTGTTCTCCTGATTTGTGTGCATCAAAGCCCTGGGAAGATACATTTATTACTTATTTCTCTGAGACAAGACTGGCATTTTCAGAGCTTGACAGCTCAGATGGA-CCATCGGTTTCTGGTGGAACAAAAAACTTGTTGAAACCAAGCAACAGATCTGAGCCACAGACTGACCCAACACTGACCATGATTCGCAACAT-GGATGCTGTCTCAAGAGCTGCAACACTAC-GGAACTACATCGATATGATTCAAAGCTTGGATAAGCTATCAAGGAATGACTGCCT-GTGGCTGTTTTCACTGTGT-GTCGCCGTGGACACT-CCCTT-GGACGCCGAGA-CATGTGCTTCGCTGAGGTCGCTGCTGCGCAAGTG-CGCAAATGTCCTTGCCGCCAAGTTGGAGA-TGGATG-ATG-AAGT-CGCTATGCTG-AACATACTGATCACAATCTCTGGACGG-TTCTTTGGACAGTATGATAATCATTAGGATAGCAAAGGTACCCCATCTTGTGATATCTCCCTTTTGTTAGTATGCCTAGACGAAGTTTTGTCTCCTTACTCCTTAGACTGCCTATATAGTGATGGAATGTGCACAATCAGTTCTCTGAAATTCTGGATGCCTTCATCACTATAATGGCTAATATAGCGAGGCACCTTGAGATGGGCGTCGTAAGTTCAAAGTTCACGCCTACGGTATGGTTTTCGAAACCTAACATTATCTTCTGTAGTGACTATGAATTTTGAAATTAAACAACTGACTTCCTGCTAAAAAA]

[+] EMBL AK107624             [CCTTCGTCCCCTTTCCCCTCTCCCATCCCCATGGCGGACAACGCCGCCGCCGCCGCCGACAGCGCGGCGCGGACGAGGTACGCGAGGGGCCAGCTCGAGGCGCTGAGGGCCGCCCCGTCGGAGGAGGCGCAGGCGCGGCTATGGGCCGAGGTGTCCGCCGCCCTCGCCGCCGCCGGCTTCTCCGGCGAGTACGACGGGCTGATGGACGCAGAGGATCCGTCGATTAGGAAGCCGGGGAGGAAGGGGAAGAAGGCCGCCGGGGGCGGGTGGAAGAGGCACGACGCGGCGGCGGCGACCCAATTCCTGGAAACGGATGAGGTTGGTGCCTGGAGGAATGGGGATTCAGGGGTCCGCTACGAGCATTACGTGGATGAGCCTCGTTCCGTGCTTCAAGTGATTGAGGAGCCATTTGTTCAGGGTGGAAATGCGGAGTACGAAGATGCTGACAGCGATGATGATTATGATGGAATTTTGAAGCCCGCCTTCGCAGTTGATGGGGATCCCGATTTCGAGTCGGGTGAGCCGCTCGATAGCTTTGAGTACCTTCGGCGTGTCAGGTGGGAAGCTAACCAAATTCCCAGAGTGAAGGTGGCGAAGATAGATTTGAATACGGCTAGAAATGAACAGACGCCTTACATGCCAGAAATTCCTGATATAGCAAAGTGTTCTCCTGATTTGTGTGCATCAAAGCCCTGGGAAGATACATTTATTACTTATTTCTCTGAGACAAGACTGGCATTTTCAGAGCTTGACAGCTCAGATGGA CCATCGGTTTCTGGTGGAACAAAAAACTTGTTGAAACCAAGCAACAGATCTGAGCCACAGACTGACCCAACACTGACCATGATTCGCAACAT GGATGCTGTCTCAAGAGCTGCAACACTAC GGAACTACATCGATATGATTCAAAGCTTGGATAAGCTATCAAGGAATGACTGCCT GTGGCTGTTTTCACTGTGT GTCGCCGTGGACACT CCCTT GGACGCCGAGA CATGTGCTTCGCTGAGGTCGCTGCTGCGCAAGTG CGCAAATGTCCTTGCCGCCAAGTTGGAGA TGGATG ATG AAGT CGCTATGCTG AACATACTGATCACAATCTCTGGACGG TTCTTTGGACAGTATGATAATCATTAGGATAGCAAAGGTACCCCATCTTGTGATATCTCCCTTTTGTTAGTATGCCTAGACGAAGTTTTGTCTCCTTACTCCTTAGACTGCCTATATAGTGATGGAATGTGCACAATCAGTTCTCTGAAATTCTGGATGCCTTCATCACTATAATGGCTAATATAGCGAGGCACCTTGAGATGGGCGTCGTAAGTTCAAAGTTCACGCCTACGGTATGGTTTTCGAAACCTAACATTATCTTCTGTAGTGACTATGAATTTTGAAATTAAACAACTG                ]
[+] EMBL CA767301             [                                                                                                                                                                                                                                                                                        ACGCGGCGGCGGCGACCCAATTCCTGGAAACGGATGGGGTTGGTGCCTGGAGGAATGGGGATTCAGGGGTCCGCTACGAGCATTACGTGGATGAGCCTCGTTCCGTGCTTCAAGTGATTGAGGAGCCATTTGTTCAGGGTGGAAATGCGGAGTACGAAGATGCTGACAGCGATGATGATTATGATGGAATTTTGAAGCCCGCCTTCGCAGTTGATGGGGATCCCGATTTCGAGTCGGGTGAGCCGCTCGATGGCTTTGAGTACCTTCGGCGTGTCAGGTGGGAAGCTAACCAAATTCCCAGAGTGAAGGTGGCGAAGATAGATTTGAATACGGCTAGAAATGAACAGACGCCTTACATGCCAGAAATTCCTGATATAGCAAAGTGTTCTCCTGATTTGTGTGCATCAAAGCCCTGGGAAGATACATTTATTACTTATTTCTCTGAGACAAGACTGGCATTTTCAGAGCTTGACAGCTCAGATGGACCCATCGGTTTCTGGTGGAACAAAAAACTTGTTGAAACCAAGCAACAGATCTGAGCCACAGACTGACCCAACACTGACCATGATTCGCAACATGGGATGCTGTCTCAAGAGCTGCAACACTAC GGAACTACATCGATATGATTCAAAGCTTGGATAAGCTATCAAGGAATGACTGGCTGGNGGCTGTTTTCACTGCGTGGTCGCCGTGGACACT CCCTT GGACGCCGAGT CATGTGCTTCGCTGAGGTCGCTGCTGCGCAAGTGCCNCAAATGTCCTTGCCGCC AGTTGGAGA TGGTTGNATG AA                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BP184983             [                                                                                                                                                                                                                                                                                              acgaGGCGACCCAATTCCTGGAAACGGATGAGGTTGGTGCCTGGAGGAATGGGGATTCAGGGGTCCGCTACGAGCATTACGTGGATGAGCCTCGTTCCGTGCTTCAAGTGATTGAGGAGCCATTTGTTCAGGGTGGAAATGCGGAGTACGAAGATGCTGACAGCGATGATGATTATGATGGAATTTTGAAGCCCGCCTTCGCCGTTGATGGGGATCCCGATTTCGAGTCGGGTGAGCCGCTCGATGGCTTTGAGTACCTTCGGCGTGTCAGGTGGGAAGCTAACCAAATTCCCAGAGTGAAGGTGGCGAAGATAGATTTGAATACGGCTAGAAATGAACAGACGCCTTACATGCCAGAAATTCCTGATATAGCAAAGTGTTCTCCTGATTTGTGTGCATCAAAGCCCTGGGAAGATACATTTATTACTTATTTCTCTGAGACAAGACTGGCATTTTCAGAGCTTGACAGCTCAGATGGA CCATCGGTTTCTGGTGGAACAAAAAACTTGTTGAAACCAAGCAACAGATCTGAGCCACAGACTGACCCAACACTGACCATGATTCGCAACAT GGATGCTGTCTCAAGAGCTGCAACACTAC GGAACTACATCGATATGATTCAAAGCTTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB096576             [                                                                                                                                                                                                                                                                                                                                                                     GAGCATTACGTGGATGAGCCTCGTTCCGTGCTTCAAGTGATTGAGGAGCCATTTGTTCAGGGTGGAAATGCGGAGTACGAAGATGCTGACAGCGATGATGATTATGATGGAATTTTGAAGCCCGCCTTCGCAGTTGATGGGGATCCCGATTTCGAGTCGGGTGAGCCGCTCGATGGCTTTGAGTACCTTCGGCGTGTCAGGTGGGAAGCTAACCAAATTCCCAGAGTGAAGGTGGCGAAGATAGATTTGAATACGGCTAGAAATGAACAGACGCCTTACATGCCAGAAATTCCTGATATAGCAAAGTGTTCTCCTGATTTGTGTGCATCAAAGCCCTGGGAAGATACATTTATTACTTATTTCTCTGAGACAAGACTGGCATTTTCAGAGCTTGACAGCTCAGATGGA CCATCGGTTTCTGGTGGAACAAAAAACTTGTTGAAACCAAGCAACAGATCTGAGCCACAGACTGACCCAACACTGACCATGATTCGCAACAT GGATGCTGTCTCAAGAGCTGCAACACTAC GGAACTACATCGATATGATTCAAAGCTTGGATAAGCTATCAAGGAATGACTGCCT GTGGCTGTTTTCACTGTGT GTCGCCGTGGACACT CCCTTGGGACGCCGAGA CATGTGCTTCGCTGAGGTCGCTGCTGCGCAAGTG CNCAAATGTCCTTGCCGCCAAGTTGGAGANTGGATG ATGAAAGTNCCTTTTGCTGAAACATACTGATCACAATCTCTGGACGGTTTCTTTtggga                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CF326960             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATGCTGTCTCAAGAGCTGCAACACTACGGGAACTACATCGATATGATTCAAAGCTTGGATAAGCTATCAAGGAATGACTGCCT GTGGCTGTTTTCACTGTGT GTCGCCGTGGACACTCCCCTT GGACGCCGAGANCATGTGCTTCGCTGAGGTCGCTGCTGCGCAAGTG CGCAAATGTCCTTGCCGCCAAGTTGGAGA TGGATG ATG AAGT CGCTATGCTG AACATACTGATCACAATCTCTGGACGG TTCTTTGGACAGTATGATAATCATTAGGATAGCAAAGGTACCCCATCTTGTGATATCTCCCTTTTGTTAGTATGCCTAGACGAAGTTTTGTCTCCTTACTCCTTAGACTGCCTATATAGTGATGGAATGTGCACAATCAGTTCTCTGAAATTCTGGATGCCTTCATCACTATAATGGCTAATATAGCGAGGCACCTTGAGATGGGCGTCGTAAGTTCAAAGTTCACGCCTACGGTATGGTTTTCGAAACCTAACATTATCTTCTGTAGTGACTATGAATTTTGAAATTAAACAACTGACTTCCTGCTAAAAAA]




>consensus_7688#0
CCTTCGTCCCCTTTCCCCTCTCCCATCCCCATGGCGGACAACGCCGCCGCCGCCGCCGAC
AGCGCGGCGCGGACGAGGTACGCGAGGGGCCAGCTCGAGGCGCTGAGGGCCGCCCCGTCG
GAGGAGGCGCAGGCGCGGCTATGGGCCGAGGTGTCCGCCGCCCTCGCCGCCGCCGGCTTC
TCCGGCGAGTACGACGGGCTGATGGACGCAGAGGATCCGTCGATTAGGAAGCCGGGGAGG
AAGGGGAAGAAGGCCGCCGGGGGCGGGTGGAAGAGGCACGACGCGGCGGCGGCGACCCAA
TTCCTGGAAACGGATGAGGTTGGTGCCTGGAGGAATGGGGATTCAGGGGTCCGCTACGAG
CATTACGTGGATGAGCCTCGTTCCGTGCTTCAAGTGATTGAGGAGCCATTTGTTCAGGGT
GGAAATGCGGAGTACGAAGATGCTGACAGCGATGATGATTATGATGGAATTTTGAAGCCC
GCCTTCGCAGTTGATGGGGATCCCGATTTCGAGTCGGGTGAGCCGCTCGATGGCTTTGAG
TACCTTCGGCGTGTCAGGTGGGAAGCTAACCAAATTCCCAGAGTGAAGGTGGCGAAGATA
GATTTGAATACGGCTAGAAATGAACAGACGCCTTACATGCCAGAAATTCCTGATATAGCA
AAGTGTTCTCCTGATTTGTGTGCATCAAAGCCCTGGGAAGATACATTTATTACTTATTTC
TCTGAGACAAGACTGGCATTTTCAGAGCTTGACAGCTCAGATGGACCATCGGTTTCTGGT
GGAACAAAAAACTTGTTGAAACCAAGCAACAGATCTGAGCCACAGACTGACCCAACACTG
ACCATGATTCGCAACATGGATGCTGTCTCAAGAGCTGCAACACTACGGAACTACATCGAT
ATGATTCAAAGCTTGGATAAGCTATCAAGGAATGACTGCCTGTGGCTGTTTTCACTGTGT
GTCGCCGTGGACACTCCCTTGGACGCCGAGACATGTGCTTCGCTGAGGTCGCTGCTGCGC
AAGTGCGCAAATGTCCTTGCCGCCAAGTTGGAGATGGATGATGAAGTCGCTATGCTGAAC
ATACTGATCACAATCTCTGGACGGTTCTTTGGACAGTATGATAATCATTAGGATAGCAAA
GGTACCCCATCTTGTGATATCTCCCTTTTGTTAGTATGCCTAGACGAAGTTTTGTCTCCT
TACTCCTTAGACTGCCTATATAGTGATGGAATGTGCACAATCAGTTCTCTGAAATTCTGG
ATGCCTTCATCACTATAATGGCTAATATAGCGAGGCACCTTGAGATGGGCGTCGTAAGTT
CAAAGTTCACGCCTACGGTATGGTTTTCGAAACCTAACATTATCTTCTGTAGTGACTATG
AATTTTGAAATTAAACAACTGACTTCCTGCTAAAAAA
clustalw multiple alignements is not computed in this case