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Oryza sativa
cluster # 7706 cluster # 7706       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7706#0 length = 1836 sequences # 5  

consensusID : consensus_7706#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1836
fasta sequence
                              [TCTGGTTGTCGGAGCCTCATCAATCTCACTCATTCTCACCCGCTCCTTGCCCACGACGCGCACGGCCACGCCGCCATGGCCGCGGCCGCGCTGCTCCTCCTCGCCGCGGCCGCCGCCGCCGTCGTGGTTGCCATGGCGCTCAGATGGCTCCTCCTCCTCGGGGGCCCCGCCGCCGGGAGGCTGGGGAAGAGGGCGCGGATGCCGCCGGGGAGCACGGGCCTGCCTCTGATTGGCGAGACGCTGCGGCTCATCTCGGCGTACAAGACGCCCAACCCGGAGCCGTTCATCGACGAGCGCGTGGCGCGCCACGGCGGCGTGTTCACCACCCACGTCTTCGGCGAGCGCACCGTGTTCTCCGCCGACCCGGCCTTCAACCGCCTCCTCCTCGCCGCCGAGGGCCGCGCCGTCCACTCCAGCTACCCGTCCTCCATCGCCACGCTCCTCGGCGCGCGCTCCCTGCTCCTCACCCGCGGCGCCGCGCACAAGCGGCTCCACTCCCTCACCCTCACCCGCCTCGGCCGCCCCGCGTCGCCGCCCCTCCTCGCGCACATCGACCGCCTCGTGCTCGCCACCATGCGCCAGTGGGAGCCCGCCGCCACCGTCCGCCTCATGGACGAGGCCAAGAAGATCACCTTCAACCTCACCGTCAAGCAGCTCGTCAGCATCGAGCCGGGACCGTGGACCGAGAGCCTCCGCCGCGAGTACGTCAAGCTCATCGACGGCTTCTTCTCCATCCCCTTTCCTCTCGCCTACTTCCTCCCTTTTACCACCTACGGCCAGGCCCTCAAGGCGAGGAAGAAGGTGGCCGGTGCACTGCGGGAGGTGATAAAGAAGAGGATGGAGGAGAAAGCGGAGAATGGTGGCTCCATTGGGGATGATGAGGGGAAGAAGGAGAAGAAGGACATGGTGGAGGAGCTTCTTCAGGCGGAGGGTGGCAGCTTCTCGGAGGAAGAGATGGTGGATTTCTGCCTTTCTCTGCTGGTGGCTGGGTATGAGACTACGTCCGTGCTCATGACGCTCGCGGTCAAGTTCCTCACTGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGAAGAGCATGCCAATATCAGGGATATGAAAGGGAAAAACCAACCATTAGAGTGGAGCGATTACAAGTCCATGCCATTTACTCAATGTGTGATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTATTCAGGCGAGCAAACACTGATATTCATTATAAAGATTACACAATTCCAAAGGGATGCAAGATTTTTGCTTCATTCCGAGCTGTGCACCTTAATAATGAACACTACGAGAATGCTCGGACATTTAACCCTTGGAGATGGCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATATTTACTCCATTTGGTGGTGGACCTCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTCGTTTCTATCTTCCTCCATCATCTTGTAACGCGCTTTAGCTGGGAAGAAACCGAAGAAGATAGACTTGTCTTCTTCCCCACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGGCTGCTTTCAGAATCAATTTGCTGACGTTAGATTGTTTTGCAGCTGCTCTTATCTTGGAAGAAAGACTAAACATAGATAAAATTATAGAAAAATAGTTCTCGCATAGGTAGTGCATTTCCCTCTTTTTTGTTGATCTGTAACCTGGTATGTAAACAGTAGGCAGCAGAGTTGTGCTGCTTGTAAAATGACCTAAAATGCTGTGGATACCGGGTACAAGCACATTTTGGTGGGACTAGAAGGACTTAGCTAGNCCTATCATCTTGGCGTTATATGGCTNAA]

[+] EMBL AK060257             [TCTGGTTGTCGGAGCCTCATCAATCTCACTCATTCTCACCCGCTCCTTGCCCACGACGCGCACGGCCACGCCGCCATGGCCGCGGCCGCGCTGCTCCTCCTCGCCGCGGCCGCCGCCGCCGTCGTGGTTGCCATGGCGCTCAGATGGCTCCTCCTCCTCGGGGGCCCCGCCGCCGGGAGGCTGGGGAAGAGGGCGCGGATGCCGCCGGGGAGCACGGGCCTGCCTCTGATTGGCGAGACGCTGCGGCTCATCTCGGCGTACAAGACGCCCAACCCGGAGCCGTTCATCGACGAGCGCGTGGCGCGCCACGGCGGCGTGTTCACCACCCACGTCTTCGGCGAGCGCACCGTGTTCTCCGCCGACCCGGCCTTCAACCGCCTCCTCCTCGCCGCCGAGGGCCGCGCCGTCCACTCCAGCTACCCGTCCTCCATCGCCACGCTCCTCGGCGCGCGCTCCCTGCTCCTCACCCGCGGCGCCGCGCACAAGCGGCTCCACTCCCTCACCCTCACCCGCCTCGGCCGCCCCGCGTCGCCGCCCCTCCTCGCGCACATCGACCGCCTCGTGCTCGCCACCATGCGCCAGTGGGAGCCCGCCGCCACCGTCCGCCTCATGGACGAGGCCAAGAAGATCACCTTCAACCTCACCGTCAAGCAGCTCGTCAGCATCGAGCCGGGACCGTGGACCGAGAGCCTCCGCCGCGAGTACGTCAAGCTCATCGACGGCTTCTTCTCCATCCCCTTTCCTCTCGCCTACTTCCTCCCTTTTACCACCTACGGCCAGGCCCTCAAGGCGAGGAAGAAGGTGGCCGGTGCACTGCGGGAGGTGATAAAGAAGAGGATGGAGGAGAAAGCGGAGAATGGTGGCTCCATTGGGGATGATGAGGGGAAGAAGGAGAAGAAGGACATGGTGGAGGAGCTTCTTCAGGCGGAGGGTGGCAGCTTCTCGGAGGAAGAGATGGTGGATTTCTGCCTTTCTCTGCTGGTGGCTGGGTATGAGACTACGTCCGTGCTCATGACGCTCGCGGTCAAGTTCCTCACTGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGAAGAGCATGCCAATATCAGGGATATGAAAGGGAAAAACCAACCATTAGAGTGGAGCGATTACAAGTCCATGCCATTTACTCAATGTGTGATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTATTCAGGCGAGCAAACACTGATATTCATTATAAAGATTACACAATTCCAAAGGGATGCAAGATTTTTGCTTCATTCCGAGCTGTGCACCTTAATAATGAACACTACGAGAATGCTCGGACATTTAACCCTTGGAGATGGCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATATTTACTCCATTTGGTGGTGGACCTCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTCGTTTCTATCTTCCTCCATCATCTTGTAACGCGCTTTAGCTGGGAAGAAACCGAAGAAGATAGACTTGTCTTCTTCCCCACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGGCTGCTTTCAGAATCAATTTGCTGACGTTAGATTGTTTTGCAGCTGCTCTTATCTTGGAAGAAAGACTAAACATAGATAAATTTATAGAAAAATAGTTCTCGCATAGGTAGTGCATTTCCCTCTTTTTTGTTGATCTGTAACCTGGTATGTAAACAGTAGGCAGCAGAGTTGTGCTGCTTGTAAAATGACCTAAAATGCTGTGGATACC                                                                       ]
[+] EMBL CB642167             [            AGCCTCATCAATCTCACTCATTCTCACTCGCTCCTTGCCCACGACGCGCACGGCCACGCCGCCATGGCCGCGGCCGCGCTGCTCCTCCTCGCCGCGGCCGCCGCCGCCGTCGTGGTTGCCATGGCGCTCAGATGGCTCCTCCTCCTCGGGGGCCCCGCCGCCGGGAGGCTGGGGAAGAGGGCGCGGATGCCGCCGGGGAGCACGGGCCTGCCTCTGATTGGCGAGACGCTGCGGCTCATCTCGGCGTACAAGACGCCCAACCCGGAGCCGTTCATCGACGAGCGCGTGGCGCGCCACGGCGGCGTGTTCACCACCCACGTCTTCGGCGAGCGCACCGTGTTCTCCGCCGACCCGGCCTTCAACCGCCTCCTCCTCGCCGCCGAGGGCCGCGCCGTCCACTCCAGCTACCCGTCCTCCATCGCCACGCTCCTCGGCGCGCGCTCCCTGCTCCTCACCCGCGGCGCCGCGCACAAGCGGCTCCACTCCCTCACCCTCACCCGCCTCGGCCGCCCCGCGTCGCCGCCCCTCCTCGCGCACATCGACCGCCTCGTGCTCGCCACCATGCGCCAGTGGGAGCCCGCCGCCACCGTCCGCCTCATGGACGAGGCCAAGAAGATCACCTTCAACCTCACCGTCAAGCAGCTCGTCAGCATCGAGCCGGGACCGTGGACCGAGAGCCTCCGCCGCGAGTACGTCAAGCTCATCGACGGCTTCTTCTCCATCCCCTTTCCTCTCGCCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB642168             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGGATGGAGGAGAAAGCGGAGAATGGTGGCTCCATTGGGGATGATGAGGGGAAGAAGGAGAAGAAGGACATGGTGGAGGAGCTTCTTCAGGCGGAGGGTGGCAGCTTCTCGGAGGAAGAGATGGTGGATTTCTGCCTTTCTCTGCTGGTGGCTGGGTATGAGACTACGTCCGTGCTCATGACGCTCGCGGTCAAGTTCCTCACTGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGAAGAGCATGCCAATATCAGGGATATGAAAGGGAAAAACCAACCATTAGAGTGGAGCGATTACAAGTCCATGCCATTTACTCAATGTGTGATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTATTCAGGCGAGCAAACACTGATATTCATTATAAAGATTACACAATTCCAAAGGGATGCAAGATTTTTGCTTCATTCCGAGCTGTGCACCTTAATAATGAACACTACGAGAATGCTCGGACATTTAACCCTTGGAGATGGCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATATTTACTCCATTTGGTGGTGGACCTCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTCGTTTCTATCTTCCTCCATCATCTTGTAACGCGCTTTAGCTGGGAAGAAACCGAAGAAGATAGACTTGTCTTCTTCCCCACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGGCTGCTTTCAGAATCAATTTGCTGACGTTAGATTGTTTTGCAGGGGCTCTTATCTTGGAAGAAAGACTAAACATAGATAAAAaaga                                                                                                                                                                                                  ]
[+] EMBL CA764484             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCCTCACTGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGAAGAGCATGCCAATATCAGGGATATGAAAGGGAAAAAACAACCACTAGAGTGGAGTGATTACAAGTCCATGCCATTTACTCAATGTGTGATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTATTCAGGCGAGCAAACACTGATATTCATTATAAAGATTACACAATTCCAAAGGGATGCAAGATTTTTGCTTCATTCCGAGCTGTGCACCTTAATAATGAACACTACGAGAATGCTCGGACATTTAACCCTTGGAGATGGCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATATTTACTCCATTTGGTGGTGGACCCCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTCGTTTCTATCCTCCTCCATCATCTTGTAACGCGCTTTAGCTGGGAAGAAACCGAAGAAGATAGACTTGTCTTCTTCCCCACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGTCTGCTTTCAGAATCAATTTGCTGACGTTAGATCGTTTTGCAGCTGCTCTTATCTTGGAAGAAAGACTAAACATAGAAAAAATTATAGAAAAATAGTTCTCGCATAGGTAGTGCATTTCCCTCTTTTTTGNTGATCTGNAACTTGGTATGTAAACAGTANGCATCAGAGTTGTGCTGCTTGT AAATGACCT AAATGCTGNGGATACCGGGTACAAGCACATTTTGGTGGGACTAGAAGGACTTAGCTAGNCCTATCATCTTGGCGTTATATGGCTNAA]
[+] EMBL CB000906             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCAATATCAGGGATATGAAAGGGAAAAACCAACCATTAGAGTGGAGCGATTACAAGTCCATGCCATTTACTCAATGTGTGATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTATTCAGGCGAGCAAACACTGATATTCATTATAAAGATTACACAATTCCAAAGGGATGCAAGATTTTTGCTTCATTCCGAGCTGTGCACCTTAATAATGAACACTACGAGAATGCTCGGACATTTAACCCTTGGAGATGGCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATATTTACTCCATTTGGTGGTGGACCTCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTCGTTTCTATCTTCCTCCATCATCTTGTAACGCGCTTTAGCTGGGAAGAAACCGAAGAAGATAGACTTGTCTTCTTCCCCACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGGCTGCTTTCAGAATCAATTTGCTGACGTTAGATTGTTTTGCAGC                                                                                                                                                                                                                                            ]


>consensus_7706#0 TCTGGTTGTCGGAGCCTCATCAATCTCACTCATTCTCACCCGCTCCTTGCCCACGACGCG CACGGCCACGCCGCCATGGCCGCGGCCGCGCTGCTCCTCCTCGCCGCGGCCGCCGCCGCC GTCGTGGTTGCCATGGCGCTCAGATGGCTCCTCCTCCTCGGGGGCCCCGCCGCCGGGAGG CTGGGGAAGAGGGCGCGGATGCCGCCGGGGAGCACGGGCCTGCCTCTGATTGGCGAGACG CTGCGGCTCATCTCGGCGTACAAGACGCCCAACCCGGAGCCGTTCATCGACGAGCGCGTG GCGCGCCACGGCGGCGTGTTCACCACCCACGTCTTCGGCGAGCGCACCGTGTTCTCCGCC GACCCGGCCTTCAACCGCCTCCTCCTCGCCGCCGAGGGCCGCGCCGTCCACTCCAGCTAC CCGTCCTCCATCGCCACGCTCCTCGGCGCGCGCTCCCTGCTCCTCACCCGCGGCGCCGCG CACAAGCGGCTCCACTCCCTCACCCTCACCCGCCTCGGCCGCCCCGCGTCGCCGCCCCTC CTCGCGCACATCGACCGCCTCGTGCTCGCCACCATGCGCCAGTGGGAGCCCGCCGCCACC GTCCGCCTCATGGACGAGGCCAAGAAGATCACCTTCAACCTCACCGTCAAGCAGCTCGTC AGCATCGAGCCGGGACCGTGGACCGAGAGCCTCCGCCGCGAGTACGTCAAGCTCATCGAC GGCTTCTTCTCCATCCCCTTTCCTCTCGCCTACTTCCTCCCTTTTACCACCTACGGCCAG GCCCTCAAGGCGAGGAAGAAGGTGGCCGGTGCACTGCGGGAGGTGATAAAGAAGAGGATG GAGGAGAAAGCGGAGAATGGTGGCTCCATTGGGGATGATGAGGGGAAGAAGGAGAAGAAG GACATGGTGGAGGAGCTTCTTCAGGCGGAGGGTGGCAGCTTCTCGGAGGAAGAGATGGTG GATTTCTGCCTTTCTCTGCTGGTGGCTGGGTATGAGACTACGTCCGTGCTCATGACGCTC GCGGTCAAGTTCCTCACTGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGAAGAGCATGCC AATATCAGGGATATGAAAGGGAAAAACCAACCATTAGAGTGGAGCGATTACAAGTCCATG CCATTTACTCAATGTGTGATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTA TTCAGGCGAGCAAACACTGATATTCATTATAAAGATTACACAATTCCAAAGGGATGCAAG ATTTTTGCTTCATTCCGAGCTGTGCACCTTAATAATGAACACTACGAGAATGCTCGGACA TTTAACCCTTGGAGATGGCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATA TTTACTCCATTTGGTGGTGGACCTCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTC GTTTCTATCTTCCTCCATCATCTTGTAACGCGCTTTAGCTGGGAAGAAACCGAAGAAGAT AGACTTGTCTTCTTCCCCACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGGCTG CTTTCAGAATCAATTTGCTGACGTTAGATTGTTTTGCAGCTGCTCTTATCTTGGAAGAAA GACTAAACATAGATAAAATTATAGAAAAATAGTTCTCGCATAGGTAGTGCATTTCCCTCT TTTTTGTTGATCTGTAACCTGGTATGTAAACAGTAGGCAGCAGAGTTGTGCTGCTTGTAA AATGACCTAAAATGCTGTGGATACCGGGTACAAGCACATTTTGGTGGGACTAGAAGGACT TAGCTAGNCCTATCATCTTGGCGTTATATGGCTNAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)