cluster # 7727

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Oryza sativa
cluster # 7727 cluster # 7727 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7727#0 length = 1424 sequences # 5
consensusID : consensus_7727#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1424
fasta sequence
                              [GCTCGCGGAGGCCGGAGCGGAGGAGGAGACGGACGCGGCGGCGGCGCCACCGGCGACGGCCTCTCCTTCGTCTCGTTCTCCGCTCTGCTTGACGGGAGGCGGCTCCTCCGCGCGTCCCCCTCTCCGCCGCGGTGACCGGCCGAGGGGTGCTCCGCCCTCCGCTTCTCCCAACCCCGGACGGGGCGCCGCCGAGCCAGTGCTCCCCGACGGCGGCGGCGGCGGCGAGGAACCCGTCCCCGACAGCCGAAACTCGGATCCCAACTAGGAGGAGCTGCAGAAAGCCGGCGTCTCCTACCTCCAACGGCTTCGACTTGACTGCAAAATATGGATCTTTCTCCTTTCAAGTTGGATATTGATGAGCTACTAGC-GGATTATACCGAGGCAAATTGCACT-GCATTCGCTGATTTCAAGAGATTGTGGA-TGGCAAAGAAATTTTCTTATATCTATGAAGGAAGACCTAAGACAAACTCTGGCGCTTTCATGCAGTCGCTCTTTTTGCATTGTATTGGTCATATGACATCTCAGAGTTGTATGCCTCAAAGATTGGCTGGACTTTACTGCCTTTACTGTCTTTACGAATCGCAACCATACAAGCCACATTTCAAGATCTATTTGTCTCTTGAGGAGTTGAAGAAACTCAAGGATTTTGTTGTTGAGGCTAAGCAAAATGGAATGGCTGTTGTACCGTCACTTGTCAAAAGAATGCTGGACAAAGGAATGATTTTGTTTGGATTCATCAATCTACTTGGTGACTCAGGGGTGAAGCAGGTCAATGAGTTAACTGCATCTCAGAATAAGAGAGTGAAATTCGCATGTGACAAGTTGTTTATGAATACTCAGATAGACAGTTATATGCACATGGATTTGGATTCGGAGCTTGAACTTGATAAGATCAAGAAATCATCGTTGGATTATGCCAAAGCCAAGGAATTGGCATTTGCAGAGGCAAGCAATATTATCGATGTTGAAGATGCTAGGCACATTGTTCAGAATGACAAACTGCTGGGCGACAGGGTAGATGAAATCGTCAAAGAATGGGATGCACAGAAGGAGGCCTTCTACGAGAAGACGGGAGTACGTCGCGATGAACTAGCAGTAGTTGAACATGACGAATCAGGAGTACTCCCTCATGAAAACGATGAATTCGATGAGATTAGACAGCTGCTGCTAGAGTGAAAGTAGTGTACAACAGCATCCTCCTAAAAAAACAGATGAAATCATTCATTGGCTTACTGGAGTCTCTCAG--TTTTTTTTTCCTTTTGTCACTCATATGCTCTTTTTGAGTGTTTTACTGCCCTGCTGTACGTTGCAAACAAAAACAACTTGTACATAGTAGTGATATGTTGGATGAATGTTACTATTACCATATTGCGTAGTTGTACATTGCAAGATTCATTTATAAGACATGGATTTCATAAAAAAAA]

[+] EMBL AK108599             [GCTCGCGGAGGCCGGAGCGGAGGAGGAGACGGACGCGGCGGCGGCGCCACCGGCGACGGCCTCTCCTTCGTCTCGTTCTCCGCTCTGCTTGACGGGAGGCGGCTCCTCCGCGCGTCCCCCTCTCCGCCGCGGTGACCGGCCGAGGGGTGCTCCGCCCTCCGCTTCTCCCAACCCCGGACGGGGCGCCGCCGAGCCAGTGCTCCCCGACGGCGGCGGCGGCGGCGAGGAACCCGTCCCCGACAGCCGAAACTCGGATCCCAACTAGGAGGAGCTGCAGAAAGCCGGCGTCTCCTACCTCCAACGGCTTCGACTTGACTGCAAAATATGGATCTTTCTCCTTTCAAGTTGGATATTGATGAGCTACTAGC GGATTATACCGAGGCAAATTGCACT GCATTCGCTGATTTCAAGAGATTGTGGA TGGCAAAGAAATTTTCTTATATCTATGAAGGAAGACCTAAGACAAACTCTGGCGCTTTCATGCAGTCGCTCTTTTTGCATTGTATTGGTCATATGACATCTCAGAGTTGTATGCCTCAAAGATTGGCTGGACTTTACTGCCTTTACTGTCTTTACGAATCGCAACCATACAAGCCACATTTCAAGATCTATTTGTCTCTTGAGGAGTTGAAGAAACTCAAGGATTTTGTTGTTGAGGCTAAGCAAAATGGAATGGCTGTTGTACCGTCACTTGTCAAAAGAATGCTGGACAAAGGAATGATTTTGTTTGGATTCATCAATCTACTTGGTGACTCAGGGGTGAAGCAGGTCAATGAGTTAACTGCATCTCAGAATAAGAGAGTGAAATTCGCATGTGACAAGTTGTTTATGAATACTCAGATAGACAGTTATATGCACATGGATTTGGATTCGGAGCTTGAACTTGATAAGATCAAGAAATCATCGTTGGATTATGCCAAAGCCAAGGAATTGGCATTTGCAGAGGCAAGCAATATTATCGATGTTGAAGATGCTAGGCACATTGTTCAGAATGACAAACTGCTGGGCGACAGGGTAGATGAAATCGTCAAAGAATGGGATGCACAGAAGGAGGCCTTCTACGAGAAGACGGGAGTACGTCGCGATGAACTAGCAGTAGTTGAACATGACGAATCAGGAGTACTCCCTCATGAAAACGATGAATTCGATGAGATTAGACAGCTGCTGCTAGAGTGAAAGTAGTGTACAACAGCATCCTCCTAAAAAAACAGATGAAATCATTCATTGGCTTACTGGAGTCTCTCAG  TTTTTTTTTCCTTTTGTCACTCATATGCTCTTTTTGAGTGTTTTACTGCCCTGCTGTACGTTGCAAACAAAAACAACTTGTACATAGTAGTGATATGTTGGATGAATGTTACTATTACCATATTGCGTAGTTGTACATTGCAAGATTCATTTATAAGACATGGATTTCATAAA     ]
[+] EMBL AU070240             [                                                                                                   CGGCTCCTCCGCGCGTCCCCCTCTCCGCCGCGGTGACCGGCCGAGGGGTGCTCCGCCCTCCGCTTCTCCCAACCCCGGACGGGGCGCCGCCGAGCCAGTGCTCCCCGACGGCGGCGGCGGCGGCGAGGAACCCGTCCCCGACAGCCGAAACTCGGATCCCAACTAGGAGGAGCTGCAGAAAGCCGGCGTCTCCTACCTCCAACGGCTTCGACTTGACTGCAAAATATGGATCTTTCTCCTTTCAAGTTGGATATTGATGAGCTACTAGCGGGATTATACCGAGGCAAATTGCACTNGCATTCGCTGATTTCAAGAGATTGTGGATTGGCAAAGAAATTTCCTTANAACTATGAAGGAAGACCTAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CF325750             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAACTCAAGGA TTTGTTGTTGAGGCTAAGCAAAATGGAATGGCTGTTGTACCGTCACTTGTCAAAAGAATGCTGGACAAAGGAATGATTTTGTTTGGATTCATCAATCTACTTGGTGACTCAGGGGTGAAGCAGGTCAATGAGTTAACTGCATCTCAGAATAAGAGAGTGAAATTCGCATGTGACAAGTTGTTTATGAATACTCAGATAGACAGTTATATGCACATGGATTTGGGTTCGGAGCTTGAACTTGATAAGATCAAGAAATCATCGTTGGATTATGCCAAAGCCAAGGAATTGGCATTTGCAGAGGCAAGCAATATTATCGATGTTGAAGATGCTAGGCACATTGTTCAGAATGACAAACTGCTGGGCGACAGGGTAGATGAAATCGTCAAAGAATGGGATGCACAGAAGGAGGCCTTCTACGAGAAGACGGGAGTACGTCGCGATGAACTAGCAGTAGTTGAACATGACGAATCAGGAGTACTCCCTCATGAAAACGATGAATTCGATGAGATTAGACAGCTGCTGCTAGAGTGAAAGTAGTGTACAACAGCATCCTCCTAAAAAAACAGATGAAATCATTCATTGGCTTACTGGAGTCTCTCAG  TTTTTTTTTCCTTTTGTCACTCATATGCTCTTTTTGAGTGTTTTACTGCCCTGCTGTACGTTGCAAACAAAAACAACTTGTACATAGTAGTGATATGTTGGATGAATGTTA                                                                   ]
[+] EMBL AU173831             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTTCAGAATGACAAACTGCTGGGCGACAGGGTAGATGAAATCGTCAAAGAATGGGATGCACAGAAGGAGGCCTTCTACGAGAAGACGGGAGTACGTCGCGATGAACTAGCAGTAGTTGAACATGACGAATCAGGAGTACTCCCTCATGAAAACGATGAATTCGATGAGATTAGACAGCTGCTGCTAGAGTGAAAGTAGTGTACAACAGCATCCTCCTAAAAAAACAGATGAAATCATTCATTGGCTTACTGGAGTCTCTCAG  TTTTTTTTTCCTTTTGTCACTCATATGCTCTTTTTGAGTGTTTTACTGCCCTGCTGTACGTTGCAAACAAAAACAACTTGTACATAGTAGTGATATGTTGGATGAATGTTACTATTACCATATTGCGTAGTTGTACATTGCAAGATTCATTTATAAGACATGGATTTCATAAAAAAAA]
[+] EMBL BI806757             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCATTCATTGGCTTACTGGAGTCTCTCAGNTTTTTTTTTTCCTTTTGTCACTCATATGCTCTTTTTGAGTGTTTTACTGCCCTGCTGTACGTTGCAAAC  TNACAACTTGTACATAGTAGTGATATGTTGGATGAATGTTACTATTACCATATTGCGTAGTTGTACATTGCAAGATTCATTTATAAGACATGGATTTCATAAAAA   ]




>consensus_7727#0
GCTCGCGGAGGCCGGAGCGGAGGAGGAGACGGACGCGGCGGCGGCGCCACCGGCGACGGC
CTCTCCTTCGTCTCGTTCTCCGCTCTGCTTGACGGGAGGCGGCTCCTCCGCGCGTCCCCC
TCTCCGCCGCGGTGACCGGCCGAGGGGTGCTCCGCCCTCCGCTTCTCCCAACCCCGGACG
GGGCGCCGCCGAGCCAGTGCTCCCCGACGGCGGCGGCGGCGGCGAGGAACCCGTCCCCGA
CAGCCGAAACTCGGATCCCAACTAGGAGGAGCTGCAGAAAGCCGGCGTCTCCTACCTCCA
ACGGCTTCGACTTGACTGCAAAATATGGATCTTTCTCCTTTCAAGTTGGATATTGATGAG
CTACTAGCGGATTATACCGAGGCAAATTGCACTGCATTCGCTGATTTCAAGAGATTGTGG
ATGGCAAAGAAATTTTCTTATATCTATGAAGGAAGACCTAAGACAAACTCTGGCGCTTTC
ATGCAGTCGCTCTTTTTGCATTGTATTGGTCATATGACATCTCAGAGTTGTATGCCTCAA
AGATTGGCTGGACTTTACTGCCTTTACTGTCTTTACGAATCGCAACCATACAAGCCACAT
TTCAAGATCTATTTGTCTCTTGAGGAGTTGAAGAAACTCAAGGATTTTGTTGTTGAGGCT
AAGCAAAATGGAATGGCTGTTGTACCGTCACTTGTCAAAAGAATGCTGGACAAAGGAATG
ATTTTGTTTGGATTCATCAATCTACTTGGTGACTCAGGGGTGAAGCAGGTCAATGAGTTA
ACTGCATCTCAGAATAAGAGAGTGAAATTCGCATGTGACAAGTTGTTTATGAATACTCAG
ATAGACAGTTATATGCACATGGATTTGGATTCGGAGCTTGAACTTGATAAGATCAAGAAA
TCATCGTTGGATTATGCCAAAGCCAAGGAATTGGCATTTGCAGAGGCAAGCAATATTATC
GATGTTGAAGATGCTAGGCACATTGTTCAGAATGACAAACTGCTGGGCGACAGGGTAGAT
GAAATCGTCAAAGAATGGGATGCACAGAAGGAGGCCTTCTACGAGAAGACGGGAGTACGT
CGCGATGAACTAGCAGTAGTTGAACATGACGAATCAGGAGTACTCCCTCATGAAAACGAT
GAATTCGATGAGATTAGACAGCTGCTGCTAGAGTGAAAGTAGTGTACAACAGCATCCTCC
TAAAAAAACAGATGAAATCATTCATTGGCTTACTGGAGTCTCTCAGTTTTTTTTTCCTTT
TGTCACTCATATGCTCTTTTTGAGTGTTTTACTGCCCTGCTGTACGTTGCAAACAAAAAC
AACTTGTACATAGTAGTGATATGTTGGATGAATGTTACTATTACCATATTGCGTAGTTGT
ACATTGCAAGATTCATTTATAAGACATGGATTTCATAAAAAAAA
clustalw multiple alignements is not computed in this case