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Oryza sativa
cluster # 7816 cluster # 7816       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7816#0 length = 1114 sequences # 5  

consensusID : consensus_7816#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1114
fasta sequence
                              [TCCATTCGCGTCGTGTTGCTCCGTCGGTCGTGTGTCCCCCAAAGGCTCCAAGCTCCGTCGTTCCTCTCCTCCTCCGCCGCCGCCGCCGCCGAAGCCGACGAGCAGTAGCCGGTAGGCATGACGAGGCTCGCGGCAGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCGTCCTCCTCGCGCTCGTCCGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCGTCCGGAGAAACCCCCGCGGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTCAAGCCTTCTGACGAAGGTGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAAGCTATACTATTGCAAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTGTGTGGCACCAATGTTGAACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGATCCTATCAGAGTGGTGCTGGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATTACTAAGAACCGGGGTTTCTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAGCCCGTCCATTTTTATCGTGCTTATGGCAATCAGCTCCAAAATGAACCCTCTCAGCCTTTGGATCTGAACTCCTATCTGCAAATGTGGTAGAAAGTTTGACTTTGTACGTTTGCACTCTACTGTCAGTCGCTTTTATGTTATTTTGTTTGTGCTTTTAGTTGTGCTACTTCATTTCTCTAATTTCATGTGTAAACTGGAAGTTGCTGTTGCCCCCAGTTTACAACAGAAACATCAGAAGGAATTATCCGTAATAAATGTTCAAAATTGCACAAAAAAAGGA]

[+] EMBL AK102161             [TCCATTCGCGTCGTGTTGCTCCGTCGGTCGTGTGTCCCCCAAAGGCTCCAAGCTCCGTCGTTCCTCTCCTCCTCCGCCGCCGCCGCCGCCGAAGCCGACGAGCAGTAGCCGGTAGGCATGACGAGGCTCGCGGCAGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCGTCCTCCTCGCGCTCGTCCGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCGTCCGGAGAAACCCCCGCGGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTCAAGCCTTCTGACGAAGGTGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAAGCTATACTATTGCAAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTGTGTGGCACCAATGTTGAACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGATCCTATCAGAGTGGTGCTGGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATTACTAAGAACCGGGGTTTCTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAGCCCGTCCATTTTTATCGTGCTTATGGCAATCAGCTCCAAAATGAACCCTCTCAGCCTTTGGATCTGAACTCCTATCTGCAAATGTGGTAGAAAGTTTGACTTTGTACGTTTGCACTCTACTGTCAGTCGCTTTTATGTTATTTTGTTTGTGCTTTTAGTTGTGCTACTTCATTTCTCTAATTTCATGTGTAAACTGGAAGTTGCTGTTGCCCCCAGTTTACAACAGAAACATCAGAAGGAATTATCCGTAATAAATGTTCAAAATTGCACA         ]
[+] EMBL AK061166             [ CCATTCGCGTCGTGTTGCTCCGTCGGTCGTGTGTCCCCCAAAGGCTCCAAGCTCCGTCGTTCCTCTCCTCCTCCGCCGCCGCCGCCGCCGAAGCCGACGAGCAGTAGCCGGTAGGCATGACGAGGCTCGCGGCAGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCGTCCTCCTCGCGCTCGTCCGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCGTCCGGAGAAACCCCCGCGGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTCAAGCCTTCTGACGAAGGTGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAAGCTATACTATTGCAAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTGTGTGGCACCAATGTTGAACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGATCCTATCAGAGTGGTGCTGGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATTACTAAGAACCGGGGTTTCTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAGCCCGTCCATTTTTATCGTGCTTATGGCAATCAGCTCCAAAATGAACCCTCTCAGCCTTTGGATCTGAACTCCTATCTGCAAATGTGGTAGAAAGTTTGACTTTGTACGTTTGCACTCTACTGTCAGTCGCTTTTATGTTATTTTGTTTGTGCTTTTAGTTGTGCTACTTCATTTCTCTAATTTCATGTGTAAACTGGAAGTTGCTGTTGCCCCCAGTTTACAACAGAAACATCAGAAGGAATTATCCGTAATAAATGTTCAAAATTGCAC          ]
[+] EMBL AK104514             [                       TCGGTCGTGTGTCCCCCAAAGGCTCCAAGCTCCGTCGTTCCTCTCCTCCTCCGCCGCCGCCGCCGCCGAAGCCGACGAGCAGTAGCCGGTAGGCATGACGAGGCTCGCGGCAGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCGTCCTCCTCGCGCTCGTCCGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCGTCCGGAGAAACCCCCGCGGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTCAAGCCTTCTGACGAAGGTGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAAGCTATACTATTGCAAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTGTGTGGCACCAATGTTGAACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGATCCTATCAGAGTGGTGCTGGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATTACTAAGAACCGGGGTTTCTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAGCCCGTCCATTTTTATCGTGCTTATGGCAATCAGCTCCAAAATGAACCCTCTCAGCCTTTGGATCTGAACTCCTATCTGCAAATGTGGTAGAAAGTTTGACTTTGTACGTTTGCACTCTACTGTCAGTCGCTTTTATGTTATTTTGTTTGTGCTTTTAGTTGTGCTACTTCATTTCTCTAATTTCATGTGTAAACTGGAAGTTGCTGTTGCCCCCAGTTTACAACAGAAACATCAGAAGGAATTATCCGTAATAAATGTTC                    ]
[+] EMBL CA753830             [                           TCGTGTGTCCCCCAAAGGCTCCAAGCTCCGTCGTTCCTCTCCTCCTCCGCCGCCGCCGCCGCCGAAGCCGACGAGCAGTAGCCGGTAGGCATGACGAGGCTCGCGGCAGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCGTCCTCCTCGCGCTCGTCCGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCGTCCGGAGAAACCCCCGCGGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTCAAGCCTTCTGACGAAGGTGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGANAAGCTATACTATTGGCAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB679091             [                                                                                                                                                                                                                                                                                                                                  ATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAAGCTATACTATTGCAAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTGTGTGGCACCAATGTTGAACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGATCCTATCAGAGTGGTGCTGGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATTACTAAGAACCGGGGTTTCTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAGCCCGTCCATTTTTATCGTGCTTATGGCAATCAGCTCCAAAATGAACCCTCTCAGCCTTTGGATCTGAACTCCTATCTGCAAATGTGGTAGAAAGTTTGACTTTGTACGTTTGCACTCTACTGTCAGTCGCTTTTATGTTATTTTGTTTGTGCTTTTAGTTGTGCTACTTCATTTCTCTAATTTCATGTGTAAACTGGAAGTTGCTGTTGCCCCCAGTTTACAACAGAAACATCAGAAGGAATTATCCGTAATAAATGTTCAAAATTGCACAAAAAAAGGA]


>consensus_7816#0 TCCATTCGCGTCGTGTTGCTCCGTCGGTCGTGTGTCCCCCAAAGGCTCCAAGCTCCGTCG TTCCTCTCCTCCTCCGCCGCCGCCGCCGCCGAAGCCGACGAGCAGTAGCCGGTAGGCATG ACGAGGCTCGCGGCAGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCGTCC TCCTCGCGCTCGTCCGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCGTCC GGAGAAACCCCCGCGGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTCAAG CCTTCTGACGAAGGTGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGT CTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCA CTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGG TTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTAC AGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAAGCT ATACTATTGCAAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTGTGT GGCACCAATGTTGAACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGATCCT ATCAGAGTGGTGCTGGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATTACT AAGAACCGGGGTTTCTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAGCCCGTC CATTTTTATCGTGCTTATGGCAATCAGCTCCAAAATGAACCCTCTCAGCCTTTGGATCTG AACTCCTATCTGCAAATGTGGTAGAAAGTTTGACTTTGTACGTTTGCACTCTACTGTCAG TCGCTTTTATGTTATTTTGTTTGTGCTTTTAGTTGTGCTACTTCATTTCTCTAATTTCAT GTGTAAACTGGAAGTTGCTGTTGCCCCCAGTTTACAACAGAAACATCAGAAGGAATTATC CGTAATAAATGTTCAAAATTGCACAAAAAAAGGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)