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Oryza sativa
cluster # 7817 cluster # 7817       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7817#0 length = 2248 sequences # 4  
consensus_7817#1 length = 446 sequences # 1  

consensusID : consensus_7817#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2248
fasta sequence
                              [TCCAATCCTTCCGCCACGCCTCCGCCTCCGCCGCCGCCTCGCCGTCCGCCTCCGCGGCCGCCGCCGCCGCCTCGCGGCAAAACCCTAACCCTCGAACTCCCCCCCACCCCACTCGCCCCCGCGCGGAGCAGGCGAGCGGCTACCCCAACCCGACCCCATGGCGTCCTCGACGGCGGCCAACCTGTGGGTTCTGCTCGGCCTCGGCATCGCCGGGGTCCTCCTGGCGGCGAAGCGGCTGCGGCGGCCCGCGCGGCCCGACAACGGCGCGTTCATCGCCCGCCTCGAGCTCCTCCCCCCGCCGCAGCCGCCG-CCCCCCCAGGCGCGACACCCACTCACGGGGCTCTGCTTCGCCATCGCCGACGCATTCCACGTAACTGGTTATATAACAAGTTTTGGCAGCTTAGAATGGGCAAAGACACATGATGCAGCAACACAAACATCTCTAGTCGTTTCATCTCTTGTAGATGGTGGTGCTATGTGTGTTGGAAAAACTGTTATTGATGAAATGGCATTTAGTATCCATGGTGAGAATAAACATTTTGGCACACCAACAAATCCTGCTGCTCCAGATCGAGTACCTGGAGGATGTTCAAGTGGGTCAGCTGTTGCTGTTGCTGCTGGCATTGTAGATTTTTCCTTAGGTATTGATACCATTGGAGGAGTAAGGGTACCAGGTAGTTATTGTGGCGTCTTGGCATTCCGGCCTTCACATGCTGTTGTCCCCAACAATGGTGTTATTCCTGTCGCTCCTAGCCTGGATGCCATAGGTTGGTTTGCGAGGGATCCAAGTGTACTGCGTCGTGTTGGCCATCTCCTTCTGAGGCTACCCTACGCTGATATTCGACAACCCAGACATTTCTACATAGCAGATGATTGCTTTGAAATGTCAAAGGTGCATGCAAGAAGATTGACTCAGGTGGTGACGAAATCTGTGGAAAAGCTATTTGGGAGACAAGTCCTGGGTCATGTTAATCTTGAAAATTATTTGGCTTCAAGAATACCCAGCCTGAGGAACAATTCAAATGGTCATGGTGACTCAAAGTTTTCTTCATTGCTAGCACTTTCTAGGGCTATGCAGTTTCTTCACAAACATGAATTCAAAGATCAACATATGGAGTGGATAAACTCTGTTAAGCCTGCTGTTGATGCATGCATAGTTGGTAATTTGTCTGATGATGGTGAGTCAACTATCAATAACAGTCAAGATGCAAGGAAAGAAGTCCGTGCAGCTCTCGGTGCTCTTCTTAAGGATGATGGAATTCTGGTCATTCCAACTGTTCTGGGATGCCCCCCAAAACTAAATGCCAGGGAACTTTCATCTCAGGACTACAATGTTCAGACATCATGTCTTACATCTTTAGCTAGCATGTCAGGGTGTTGCCAGGTGACGGTTCCTCTGGGTACACATGATAAGTGTCCAGTTTCAGTTTCTTTGATTGCAAGGCATGGTGGTGATCGATTTTTATTGGACACCATTCAAACAATTTATGCTACCATCCAAGAGCAAGTTGACGCTCTAGCAAAGTCTAATGTCTCGAGTAAACAGGCGATGAGTGAAGAAGCTGCTGAAGCTGCTAAAGAGAAAGGTAACATTGCATTTAAGG-AGAAACAAT-GGCAAAAGGCAA-TAAATTTCTATACTGAAGCAATCAAA-TTAAATAATAAAGTGGCTACATACTACAGCAACAGAGCTGCTGCTTTTCTAGAGCTAGCTAGTTACCGCCAAGCTGAGGCAGATTGCACAAGTGCCATCGATGTTGATCCAAAGATTGTAAAAGCTTATTTGAGGAGAGGCACTGCAAGGGAGATGCTGGGTTACTACAAGGAGGCTGTTGATGATTTCAGCCACGCCCTTGTTCTAGAACCCATGAACAAGACAGCTGGTGTGGCCATCAATAGGTTAAAGAAGCTATTTCCGTAAATACTGGGCTGTTGGATTTTTTTTCTGCATAAAGATACTCAAGTTCTGCATGCCTGGGGGGTGAAAAAGAAGGTACCTGAGTGCCACCGATTGATGCTGCTATCCAAGTTCATAAGGTACTAACTACCGTTGCTACTGGCGATAGAACTGTCTATCATCTGTGTTTTCAATTAGTTGTTACCCCCCAAGTTTTGGAAAAGTGGAATCGAAAACAGAATTTTGGGAGTTGATCATAGTAAACAATGCCTTTAAATATGCTCTAGTGGTGTTCTTGGCCCACTTCCATGTATAATATCGGTTTTGGCAATTATTTGTTGAGGCACCCATATT]

[+] EMBL AK067052             [TCCAATCCTTCCGCCACGCCTCCGCCTCCGCCGCCGCCTCGCCGTCCGCCTCCGCGGCCGCCGCCGCCGCCTCGCGGCAAAACCCTAACCCTCGAACTCCCCCCCACCCCACTCGCCCCCGCGCGGAGCAGGCGAGCGGCTACCCCAACCCGACCCCATGGCGTCCTCGACGGCGGCCAACCTGTGGGTTCTGCTCGGCCTCGGCATCGCCGGGGTCCTCCTGGCGGCGAAGCGGCTGCGGCGGCCCGCGCGGCCCGACAACGGCGCGTTCATCGCCCGCCTCGAGCTCCTCCCCCCGCCGCAGCCGCCG CCCCCCCAGGCGCGACACCCACTCACGGGGCTCTGCTTCGCCATCGCCGACGCATTCCACGTAACTGGTTATATAACAAGTTTTGGCAGCTTAGAATGGGCAAAGACACATGATGCAGCAACACAAACATCTCTAGTCGTTTCATCTCTTGTAGATGGTGGTGCTATGTGTGTTGGAAAAACTGTTATTGATGAAATGGCATTTAGTATCCATGGTGAGAATAAACATTTTGGCACACCAACAAATCCTGCTGCTCCAGATCGAGTACCTGGAGGATGTTCAAGTGGGTCAGCTGTTGCTGTTGCTGCTGGCATTGTAGATTTTTCCTTAGGTATTGATACCATTGGAGGAGTAAGGGTACCAGGTAGTTATTGTGGCGTCTTGGCATTCCGGCCTTCACATGCTGTTGTCCCCAACAATGGTGTTATTCCTGTCGCTCCTAGCCTGGATGCCATAGGTTGGTTTGCGAGGGATCCAAGTGTACTGCGTCGTGTTGGCCATCTCCTTCTGAGGCTACCCTACGCTGATATTCGACAACCCAGACATTTCTACATAGCAGATGATTGCTTTGAAATGTCAAAGGTGCATGCAAGAAGATTGACTCAGGTGGTGACGAAATCTGTGGAAAAGCTATTTGGGAGACAAGTCCTGGGTCATGTTAATCTTGAAAATTATTTGGCTTCAAGAATACCCAGCCTGAGGAACAATTCAAATGGTCATGGTGACTCAAAGTTTTCTTCATTGCTAGCACTTTCTAGGGCTATGCAGTTTCTTCACAAACATGAATTCAAAGATCAACATATGGAGTGGATAAACTCTGTTAAGCCTGCTGTTGATGCATGCATAGTTGGTAATTTGTCTGATGATGGTGAGTCAACTATCAATAACAGTCAAGATGCAAGGAAAGAAGTCCGTGCAGCTCTCGGTGCTCTTCTTAAGGATGATGGAATTCTGGTCATTCCAACTGTTCTGGGATGCCCCCCAAAACTAAATGCCAGGGAACTTTCATCTCAGGACTACAATGTTCAGACATCATGTCTTACATCTTTAGCTAGCATGTCAGGGTGTTGCCAGGTGACGGTTCCTCTGGGTACACATGATAAGTGTCCAGTTTCAGTTTCTTTGATTGCAAGGCATGGTGGTGATCGATTTTTATTGGACACCATTCAAACAATTTATGCTACCATCCAAGAGCAAGTTGACGCTCTAGCAAAGTCTAATGTCTCGAGTAAACAGGCGATGAGTGAAGAAGCTGCTGAAGCTGCTAAAGAGAAAGGTAACATTGCATTTAAGG AGAAACAAT GGCAAAAGGTAA TAAATTTCTATACTGAAGCAATCAAA TTAAATAATAAAGTGGCTACATACTACAGCAACAGAGCTGCTGCTTTTCTAGAGCTAGCTAGTTACCGCCAAGCTGAGGCAGATTGCACAAGTGCCATCGATGTTGATCCAAAGATTGTAAAAGCTTATTTGAGGAGAGGCACTGCAAGGGAGATGCTGGGTTACTACAAGGAGGCTGTTGATGATTTCAGCCACGCCCTTGTTCTAGAACCCATGAACAAGACAGCTGGTGTGGCCATCAATAGGTTAAAGAAGCTATTTCCGTAAATACTGGGCTGTTGGATTTTTTTTCTGCATAAAGATACTCAAGTTCTGCATGCCTGGGGGGTGAAAAAGAAGGTACCTGAGTGCCACCGATTGATGCTGCTATCCAAGTTCATAAGGTACTAACTACCGTTGCTACTGGCGATAGAACTGTCTATCATCTGTGTTTTCAATTAGTTGTTACCCCCCAAGTTTTGGAAAAGTGGAATCGAAAACAGAATTTTGGGAGTTGATCATAGTAAACAATGCCTTTAAATATGCTCTAGTGGTGTTCTTGGCCCACTTCCATGTATAATATCGGTTTTGGCAATTATTTGTTGAGGCACCCATATT]
[+] EMBL AK098901             [    ATCCTTCCGCCACGCCTCCGCCTCCGCCGCCGCCTCGCCGTCCGCCTCCGCGGCCGCCGCCGCCGCCTCGCGGCAAAACCCTAACCCTCGAACTCCCCCCCACCCCACTCGCCCCCGCGCGGAGCAGGCGAGCGGCTACCCCAACCCGACCCCATGGCGTCCTCGACGGCGGCCAACCTGTGGGTTCTGCTCGGCCTCGGCATCGCCGGGGTCCTCCTGGCGGCGAAGCGGCTGCGGCGGCCCGCGCGGCCCGACAACGGCGCGTTCATCGCCCGCCTCGAGCTCCTCCCCCCGCCGCAGCCGCCGCCCCCCCCAGGCGCGACACCCACTCACGGGGCTCTGCTTCGCCATCGCCGACGCATTCCACGTAACTGGTTATATAACAAGTTTTGGCAGCTTAGAATGGGCAAAGACACATGATGCAGCAACACAAACATCTCTAGTCGTTTCATCTCTTGTAGATGGTGGTGCTATGTGTGTTGGAAAAACTGTTATTGATGAAATGGCATTTAGTATCCATGGTGAGAATAAACATTTTGGCACACCAACAAATCCTGCTGCTCCAGATCGAGTACCTGGAGGATGTTCAAGTGGGTCAGCTGTTGCTGTTGCTGCTGGCATTGTAGATTTTTCCTTAGGTATTGATACCATTGGAGGAGTAAGGGTACCAGGTAGTTATTGTGGCGTCTTGGCATTCCGGCCTTCACATGCTGTTGTCCCCAACAATGGTGTTATTCCTGTCGCTCCTAGCCTGGATGCCATAGGTTGGTTTGCGAGGGATCCAAGTGTACTGCGTCGTGTTGGCCATCTCCTTCTGAGGCTACCCTACGCTGATATTCGACAACCCAGACATTTCTACATAGCAGATGATTGCTTTGAAATGTCAAAGGTGCATGCAAGAAGATTGACTCAGGTGGTGACGAAATCTGTGGAAAAGCTATTTGGGAGACAAGTCCTGGGTCATGTTAATCTTGAAAATTATTTGGCTTCAAGAATACCCAGCCTGAGGAACAATTCAAATGGTCATGGTGACTCAAAGTTTTCTTCATTGCTAGCACTTTCTAGGGCTATGCAGTTTCTTCACAAACATGAATTCAAAGATCAACATATGGAGTGGATAAACTCTGTTAAGCCTGCTGTTGATGCATGCATAGTTGGTAATTTGTCTGATGATGGTGAGTCAACTATCAATAACAGTCAAGATGCAAGGAAAGAAGTCCGTGCAGCTCTCGGTGCTCTTCTTAAGGTTGATGGAATTCTGGTCATTCCAACTGTTCTGGGATGCCCCCCAAAACTAAATGCCAGGGAACTTTCATCTCAGGACTACAATGTTCAGACATCATGTCTTACATCTTTAGCTAGCATGTCAGGGTGTTGCCAGGTGACGGTTCCTCTGGGTACACATGATAAGTGTCCAGTTTCAGTTTCTTTGATTGCAAGGCATGGTGGTGATCGATTTTTATTGGACACCATTCAAACAATTTATGCTACCATCCAAGAGCAAGTTGACGCTCTAGCAAAGTCTAATGTCTCGAGTAAACAGGCGATGAGTGAAGAAGCTGCTGAAGCTGCTAAAGAGAAAGGTAACATTGCATTTAAGG AGAAACAAT GGCAAAAGGCAA TAAATTTCTATACTGAAGCAATCAAA TTAAATAATAAAGTGGCTACATACTACAGCAACAGAGCTGCTGCTTTTCTAGAGCTAGCTAGTTACCGCCAAGCTGAGGCAGATTGCACAAGTGCCATCGATATTGATCCAAAGATTGTAAAAGCTTATTTGAGGAGAGGCACTGCAAGGGAGATGCTGGGTTACTACAAGGAGGCTGTTGATGATTTCAGCCACGCCCTTGTTCTAGAACCCATGAACAAGACAGCTGGTGTGGCCATCAATAGGTTAAAGAAGCTATTTCCGTAAATACTGGGCTGTTGGATTTTTTTTCTGCATAAAGATACTCAAGTTCTGCATGCCTGGGGGGTGAAAAAGAAGGTACCTGAGTGCCACCGATTGATGCTGCTATCCAAGTTCATAAGGTACTAACTACCGTTGCTACTGGCGATAGAACTGTCTATCATCTGTGTTTTCAATTAGTTGTTACCCCCCAAGTTTTGGAAAAGTGGAATCGAAAACAGAATTTTGGGAGTTGATCATAGTAAACAATGCCTTTAAATATGCTCTAGTGGTGTTCTTGGCCCACTTCCATGTATAATAT                                   ]
[+] EMBL CF306966             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGACTCAAAGTTTTCTTCATTGCTAGCACTTTCTAGGGCTATGCAGTTTCTTCACAAACATGAATTCAAAGATCAACATATGGAGTGGATAAACTCTGTTAAGCCTGCTGTTGATGCATGCATAGTTGGTAATTTGTCTGATGATGGTGAGTCAACTATCAATAACAGTCAAGATGCAAGGAAAGAAGTCCGTGCAGCTCTCGGTGCTCTTCTTAAGGATGATGGAATTCTGGTCATTCCAACTGTTCTGGGATGCCCCCCAAAACTAAATGCCAGGGAACTTTCATCTCAGGACTACAATGTTCAGACATCATGTCTTACATCTTTAGCTAGCATGTCAGGGTGTTGCCAGGTGACGGTTCCTCTGGGTACACATGATAAGTGTCCAGTTTCAGTTTCTTTGATTGCAAGGCATGGTGGTGATCGATTTTTATTGGACACCATTCAAACAATTTATGCTACCATCCAAGAGCAAGTTGACGCTCTAGCAAAGTCTAATGTCTCGAGTAAACAGGCGATGAGTGAAGAAGCTGCTGAAGCTGCTAAAGAGAAAGGTAACATTGCATTTAAGG AGAAACAATNGGC AAAGGCAA TAAATTTCTATACTGAAGCAATCAAA TTAAATAATAAAGTGGCTACATACTACAGCAACAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL OS0944A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGGGAACTTTCATCTCAGGACTACAATGTTCAGACATCATGTCTTACATCTTTAGCTAGCATGTCAGGGTGTTGCCAGGTGACGGTTCCTCTGGGTACACATGATAAGTGTCCAGTTTCAGTTTCTTTGATTGCAAGGCATGGTGGTGATCGATTTTTATTGGACACCATTCAAACAATTTATGCTACCATCCAAGAGCAAGTTGACGCTCTAGCAAAGTCTAATGTCTCGAGTAAACAGGCGATGAGTGAAGAAGCTGCTGAGGCTGCTAAAGAGANAGGTAACATTGCATTTAAGGNGGANCCAAT GGC ANANGCAATTAANTTTCTATACTGANGC ATCAAATTTAAATAATNAGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_7817#0 TCCAATCCTTCCGCCACGCCTCCGCCTCCGCCGCCGCCTCGCCGTCCGCCTCCGCGGCCG CCGCCGCCGCCTCGCGGCAAAACCCTAACCCTCGAACTCCCCCCCACCCCACTCGCCCCC GCGCGGAGCAGGCGAGCGGCTACCCCAACCCGACCCCATGGCGTCCTCGACGGCGGCCAA CCTGTGGGTTCTGCTCGGCCTCGGCATCGCCGGGGTCCTCCTGGCGGCGAAGCGGCTGCG GCGGCCCGCGCGGCCCGACAACGGCGCGTTCATCGCCCGCCTCGAGCTCCTCCCCCCGCC GCAGCCGCCGCCCCCCCAGGCGCGACACCCACTCACGGGGCTCTGCTTCGCCATCGCCGA CGCATTCCACGTAACTGGTTATATAACAAGTTTTGGCAGCTTAGAATGGGCAAAGACACA TGATGCAGCAACACAAACATCTCTAGTCGTTTCATCTCTTGTAGATGGTGGTGCTATGTG TGTTGGAAAAACTGTTATTGATGAAATGGCATTTAGTATCCATGGTGAGAATAAACATTT TGGCACACCAACAAATCCTGCTGCTCCAGATCGAGTACCTGGAGGATGTTCAAGTGGGTC AGCTGTTGCTGTTGCTGCTGGCATTGTAGATTTTTCCTTAGGTATTGATACCATTGGAGG AGTAAGGGTACCAGGTAGTTATTGTGGCGTCTTGGCATTCCGGCCTTCACATGCTGTTGT CCCCAACAATGGTGTTATTCCTGTCGCTCCTAGCCTGGATGCCATAGGTTGGTTTGCGAG GGATCCAAGTGTACTGCGTCGTGTTGGCCATCTCCTTCTGAGGCTACCCTACGCTGATAT TCGACAACCCAGACATTTCTACATAGCAGATGATTGCTTTGAAATGTCAAAGGTGCATGC AAGAAGATTGACTCAGGTGGTGACGAAATCTGTGGAAAAGCTATTTGGGAGACAAGTCCT GGGTCATGTTAATCTTGAAAATTATTTGGCTTCAAGAATACCCAGCCTGAGGAACAATTC AAATGGTCATGGTGACTCAAAGTTTTCTTCATTGCTAGCACTTTCTAGGGCTATGCAGTT TCTTCACAAACATGAATTCAAAGATCAACATATGGAGTGGATAAACTCTGTTAAGCCTGC TGTTGATGCATGCATAGTTGGTAATTTGTCTGATGATGGTGAGTCAACTATCAATAACAG TCAAGATGCAAGGAAAGAAGTCCGTGCAGCTCTCGGTGCTCTTCTTAAGGATGATGGAAT TCTGGTCATTCCAACTGTTCTGGGATGCCCCCCAAAACTAAATGCCAGGGAACTTTCATC TCAGGACTACAATGTTCAGACATCATGTCTTACATCTTTAGCTAGCATGTCAGGGTGTTG CCAGGTGACGGTTCCTCTGGGTACACATGATAAGTGTCCAGTTTCAGTTTCTTTGATTGC AAGGCATGGTGGTGATCGATTTTTATTGGACACCATTCAAACAATTTATGCTACCATCCA AGAGCAAGTTGACGCTCTAGCAAAGTCTAATGTCTCGAGTAAACAGGCGATGAGTGAAGA AGCTGCTGAAGCTGCTAAAGAGAAAGGTAACATTGCATTTAAGGAGAAACAATGGCAAAA GGCAATAAATTTCTATACTGAAGCAATCAAATTAAATAATAAAGTGGCTACATACTACAG CAACAGAGCTGCTGCTTTTCTAGAGCTAGCTAGTTACCGCCAAGCTGAGGCAGATTGCAC AAGTGCCATCGATGTTGATCCAAAGATTGTAAAAGCTTATTTGAGGAGAGGCACTGCAAG GGAGATGCTGGGTTACTACAAGGAGGCTGTTGATGATTTCAGCCACGCCCTTGTTCTAGA ACCCATGAACAAGACAGCTGGTGTGGCCATCAATAGGTTAAAGAAGCTATTTCCGTAAAT ACTGGGCTGTTGGATTTTTTTTCTGCATAAAGATACTCAAGTTCTGCATGCCTGGGGGGT GAAAAAGAAGGTACCTGAGTGCCACCGATTGATGCTGCTATCCAAGTTCATAAGGTACTA ACTACCGTTGCTACTGGCGATAGAACTGTCTATCATCTGTGTTTTCAATTAGTTGTTACC CCCCAAGTTTTGGAAAAGTGGAATCGAAAACAGAATTTTGGGAGTTGATCATAGTAAACA ATGCCTTTAAATATGCTCTAGTGGTGTTCTTGGCCCACTTCCATGTATAATATCGGTTTT GGCAATTATTTGTTGAGGCACCCATATT



consensusID : consensus_7817#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 446
fasta sequence
                              [TAACATTGCATTTTAAGGAGAAACAATGGCAAAAGGCAATAAATTTCTATACTGAAGCAATCAAATTAAATAATAAAGTGGCTACATACTACAGCAACAGAGCTGCTGCTTTTCTAGAGCTAGCTAGTTACCGCCAAGCTGAGGCAGATTGCACAAGTGCCATCGATATTGATCCAAAGATTGTAAAAGCTTATTTGAGGAGAGGCACTGCAAGGGAGATGCTGGGTTACTACAAGGAGGCTGTTGATGATTTCAGCCACGCCCTTGTTCTAGAACCCATGAACAAGACAGCTGGTGTGGCCATCAATAGGTTAAAGAAGCTATTTCCGTAAATACTGGGCTGTTGGATTTTTTTTCTGCATAAAGATACCCAAGTTTTGGAAAAGTGGAATCGAAAACAGAATTTTGGGAGTTGATCATAGTAAACAATGCCTTTAAATAAAAAA]

[+] EMBL AU091635             [TAACATTGCATTTTAAGGAGAAACAATGGCAAAAGGCAATAAATTTCTATACTGAAGCAATCAAATTAAATAATAAAGTGGCTACATACTACAGCAACAGAGCTGCTGCTTTTCTAGAGCTAGCTAGTTACCGCCAAGCTGAGGCAGATTGCACAAGTGCCATCGATATTGATCCAAAGATTGTAAAAGCTTATTTGAGGAGAGGCACTGCAAGGGAGATGCTGGGTTACTACAAGGAGGCTGTTGATGATTTCAGCCACGCCCTTGTTCTAGAACCCATGAACAAGACAGCTGGTGTGGCCATCAATAGGTTAAAGAAGCTATTTCCGTAAATACTGGGCTGTTGGATTTTTTTTCTGCATAAAGATACCCAAGTTTTGGAAAAGTGGAATCGAAAACAGAATTTTGGGAGTTGATCATAGTAAACAATGCCTTTAAATAAAAAA]


>consensus_7817#1 TAACATTGCATTTTAAGGAGAAACAATGGCAAAAGGCAATAAATTTCTATACTGAAGCAA TCAAATTAAATAATAAAGTGGCTACATACTACAGCAACAGAGCTGCTGCTTTTCTAGAGC TAGCTAGTTACCGCCAAGCTGAGGCAGATTGCACAAGTGCCATCGATATTGATCCAAAGA TTGTAAAAGCTTATTTGAGGAGAGGCACTGCAAGGGAGATGCTGGGTTACTACAAGGAGG CTGTTGATGATTTCAGCCACGCCCTTGTTCTAGAACCCATGAACAAGACAGCTGGTGTGG CCATCAATAGGTTAAAGAAGCTATTTCCGTAAATACTGGGCTGTTGGATTTTTTTTCTGC ATAAAGATACCCAAGTTTTGGAAAAGTGGAATCGAAAACAGAATTTTGGGAGTTGATCAT AGTAAACAATGCCTTTAAATAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7817#0      TCCAATCCTTCCGCCACGCCTCCGCCTCCGCCGCCGCCTCGCCGTCCGCCTCCGCGGCCG 60
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      CCGCCGCCGCCTCGCGGCAAAACCCTAACCCTCGAACTCCCCCCCACCCCACTCGCCCCC 120
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      GCGCGGAGCAGGCGAGCGGCTACCCCAACCCGACCCCATGGCGTCCTCGACGGCGGCCAA 180
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      CCTGTGGGTTCTGCTCGGCCTCGGCATCGCCGGGGTCCTCCTGGCGGCGAAGCGGCTGCG 240
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      GCGGCCCGCGCGGCCCGACAACGGCGCGTTCATCGCCCGCCTCGAGCTCCTCCCCCCGCC 300
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      GCAGCCGCCGCCCCCCCAGGCGCGACACCCACTCACGGGGCTCTGCTTCGCCATCGCCGA 360
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      CGCATTCCACGTAACTGGTTATATAACAAGTTTTGGCAGCTTAGAATGGGCAAAGACACA 420
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      TGATGCAGCAACACAAACATCTCTAGTCGTTTCATCTCTTGTAGATGGTGGTGCTATGTG 480
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      TGTTGGAAAAACTGTTATTGATGAAATGGCATTTAGTATCCATGGTGAGAATAAACATTT 540
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      TGGCACACCAACAAATCCTGCTGCTCCAGATCGAGTACCTGGAGGATGTTCAAGTGGGTC 600
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      AGCTGTTGCTGTTGCTGCTGGCATTGTAGATTTTTCCTTAGGTATTGATACCATTGGAGG 660
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      AGTAAGGGTACCAGGTAGTTATTGTGGCGTCTTGGCATTCCGGCCTTCACATGCTGTTGT 720
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      CCCCAACAATGGTGTTATTCCTGTCGCTCCTAGCCTGGATGCCATAGGTTGGTTTGCGAG 780
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      GGATCCAAGTGTACTGCGTCGTGTTGGCCATCTCCTTCTGAGGCTACCCTACGCTGATAT 840
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      TCGACAACCCAGACATTTCTACATAGCAGATGATTGCTTTGAAATGTCAAAGGTGCATGC 900
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      AAGAAGATTGACTCAGGTGGTGACGAAATCTGTGGAAAAGCTATTTGGGAGACAAGTCCT 960
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      GGGTCATGTTAATCTTGAAAATTATTTGGCTTCAAGAATACCCAGCCTGAGGAACAATTC 1020
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      AAATGGTCATGGTGACTCAAAGTTTTCTTCATTGCTAGCACTTTCTAGGGCTATGCAGTT 1080
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      TCTTCACAAACATGAATTCAAAGATCAACATATGGAGTGGATAAACTCTGTTAAGCCTGC 1140
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      TGTTGATGCATGCATAGTTGGTAATTTGTCTGATGATGGTGAGTCAACTATCAATAACAG 1200
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      TCAAGATGCAAGGAAAGAAGTCCGTGCAGCTCTCGGTGCTCTTCTTAAGGATGATGGAAT 1260
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      TCTGGTCATTCCAACTGTTCTGGGATGCCCCCCAAAACTAAATGCCAGGGAACTTTCATC 1320
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      TCAGGACTACAATGTTCAGACATCATGTCTTACATCTTTAGCTAGCATGTCAGGGTGTTG 1380
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      CCAGGTGACGGTTCCTCTGGGTACACATGATAAGTGTCCAGTTTCAGTTTCTTTGATTGC 1440
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      AAGGCATGGTGGTGATCGATTTTTATTGGACACCATTCAAACAATTTATGCTACCATCCA 1500
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      AGAGCAAGTTGACGCTCTAGCAAAGTCTAATGTCTCGAGTAAACAGGCGATGAGTGAAGA 1560
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      AGCTGCTGAAGCTGCTAAAGAGAAAGGTAACATTGCATTT-AAGGAGAAACAATGGCAAA 1619
consensus_7817#1      ---------------------------TAACATTGCATTTTAAGGAGAAACAATGGCAAA 33
                                                 ************* *******************

consensus_7817#0      AGGCAATAAATTTCTATACTGAAGCAATCAAATTAAATAATAAAGTGGCTACATACTACA 1679
consensus_7817#1      AGGCAATAAATTTCTATACTGAAGCAATCAAATTAAATAATAAAGTGGCTACATACTACA 93
                      ************************************************************

consensus_7817#0      GCAACAGAGCTGCTGCTTTTCTAGAGCTAGCTAGTTACCGCCAAGCTGAGGCAGATTGCA 1739
consensus_7817#1      GCAACAGAGCTGCTGCTTTTCTAGAGCTAGCTAGTTACCGCCAAGCTGAGGCAGATTGCA 153
                      ************************************************************

consensus_7817#0      CAAGTGCCATCGATGTTGATCCAAAGATTGTAAAAGCTTATTTGAGGAGAGGCACTGCAA 1799
consensus_7817#1      CAAGTGCCATCGATATTGATCCAAAGATTGTAAAAGCTTATTTGAGGAGAGGCACTGCAA 213
                      ************** *********************************************

consensus_7817#0      GGGAGATGCTGGGTTACTACAAGGAGGCTGTTGATGATTTCAGCCACGCCCTTGTTCTAG 1859
consensus_7817#1      GGGAGATGCTGGGTTACTACAAGGAGGCTGTTGATGATTTCAGCCACGCCCTTGTTCTAG 273
                      ************************************************************

consensus_7817#0      AACCCATGAACAAGACAGCTGGTGTGGCCATCAATAGGTTAAAGAAGCTATTTCCGTAAA 1919
consensus_7817#1      AACCCATGAACAAGACAGCTGGTGTGGCCATCAATAGGTTAAAGAAGCTATTTCCGTAAA 333
                      ************************************************************

consensus_7817#0      TACTGGGCTGTTGGATTTTTTTTCTGCATAAAGATACTCAAGTTCTGCATGCCTGGGGGG 1979
consensus_7817#1      TACTGGGCTGTTGGATTTTTTTTCTGCATAAAGATACCCAAGTTTTG-------GAAAAG 386
                      ************************************* ****** **       *    *

consensus_7817#0      TGAAAAAGAAGGTACCTGAGTGCCACCGATTGATGCTGCTATCCAAGTTCATAAGGTACT 2039
consensus_7817#1      TGGAATCGAAAACA---GAATTTTGGGAGTTGATCATAGTAAACAATGCCTTTAAATAAA 443
                      ** **  ***   *   ** *        *****  *  **  ***   * * *  **  

consensus_7817#0      AACTACCGTTGCTACTGGCGATAGAACTGTCTATCATCTGTGTTTTCAATTAGTTGTTAC 2099
consensus_7817#1      AAA--------------------------------------------------------- 446
                      **                                                          

consensus_7817#0      CCCCCAAGTTTTGGAAAAGTGGAATCGAAAACAGAATTTTGGGAGTTGATCATAGTAAAC 2159
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      AATGCCTTTAAATATGCTCTAGTGGTGTTCTTGGCCCACTTCCATGTATAATATCGGTTT 2219
consensus_7817#1      ------------------------------------------------------------
                                                                                  

consensus_7817#0      TGGCAATTATTTGTTGAGGCACCCATATT 2248
consensus_7817#1      -----------------------------
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)