These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7829#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1765 fasta sequence [ATCCTCTCCCCTCCCGTCTCTCATCCTTCTCCCTTTCCAAATTTCAAAATCCATCCATGGCCGGCGGCGGCGGCGGCCGTGGGCGCGGCGCGAGGGTGGCCGCGCCGGCGGGGGACAGCGGCAAGGGCGCCCAGGCGGAGTGGCTGCGGATCTACGACGGGATCGTGGCGATGCTGCGCAAGACGCAGGCGCAGGTGGAGGAGCTCGTCGCGGAGCGCGACCACCTCGCGGCCTTCGTCAAGATCCAGCACGACTTCATGGTCTCCCGCGTCGGCCGCCTCCAGTCCTCCCTGCAGCAGGCGAGGAAGGCGGACACCATCAGGAAGAGGTATGAGGCGGCCAACATGGAGATCCTTATTGGGGACAAGGAGCGGGAGGCCCGCTCCTACCAGAAGATTGCTGAACTCACGGAGAATGATTTGGAGGACTTCAGAACTTCTATAGCTGCTTTGGCTGCAGAAAACTATGAACTGAAGGAAAAACTGAAGGAAGTGGAAAGGCATGCAGAACTTGCTGAAAACACTGTTGATCACCACATTCACAGTCCAAGAGATTTAAGAGCAGAGTTAAAAAAACTAAAGCACGCCTACAAGACTTTGAGCTCTGAAAAGGAAAAGGAAGTTTCTGCATTACGTGCAGAAAATGATTTTGTGTGGAACCAGTTGAGGACAATGGAGAATGATTATACTGATCTCCTTAAGAAGAAAAAAATAGAGGCAGCACAAGCTACTGAAGCTGCACAAAAGCTTCAGAAGAATTTAGAAGAGCTGCAAGATCAAAATAAGGGCAACGAGATCGGCAGATTACAAGCAGAAGCTGTTGATGCCAAAATGAACATATCAATTCTTGAGGATAAGCTACAGGAAATGCTTTCCTTGGTGAAGGAGAAAGACTTGGAAATTGAACAACTCAAACATGGTCAGCCTATGACCAGTCAGATCAACAAAAAGGATATCAACCAGAAGAACAGAAAATGTAGGTCCCAAGACCCTCCTTCAAGGGACAAATCAACAAATTTGCAAGCCACACCGCCTGGGAGAAAAGTGAAGATTTCCA-GACAGCATGCATCAAGTTCAAAACAGAAGCAAGTCCAGTCAAGAAATAATTCTCGTAGGCAAAAATTAGAAGGTGATAAGTCTGAGGTTGGCGAAAAGCGGAAGCGTGCCTTGCCATCATCCAGTGGTCTGCAACGATGTTCCGCAAGGCAGCAGGCGAAATCCTCTGCATCTCCAGTGGTCCAGCCATTACTCTTCTCCCCGATATTCCGGGTTCCAAAGGTGAAGACCCCGACTCCTCCATAGCCACAAGCAGTCAGTTCCCCCCAGGACCAGGTCACCAGGAGCCAGCCACAGTAGGTCTGATATCCTGACTTGTGCAGCTGTTGATAGGGATTGTGGCACTGACAGTTGATGAGGCTAACCTTAATTCCCAGGAACTGCATCTGCATTGCTCCTTTATGCTCCCAGTAGGTCATTGGTGTGTTTGTAGCATACTTGACGCAGCTCTTGAACAAAAAAAAAAAATGTAGGCTATGTTAGAACGATTTTTTTCTTCATCTTTTCCTTGTGGAATGCGATGTGTATTATTTAGGCACACACCCTTGGTGGTGAGAAATTTGTCGATGCCCCATAGTGTCAGATTGGCTTGATCTGAATGAGTTCTGCGTAAATTTTTTTTCCATTGTTCGGTGTATGAACTCTGAATGCCAGGAGGCTATGTATTTTGTTGTGTATATATGTAATGTACGTATCTCGTACATCGTTAA] [+] EMBL AK107523 [ATCCTCTCCCCTCCCGTCTCTCATCCTTCTCCCTTTCCAAATTTCAAAATCCATCCATGGCCGGCGGCGGCGGCGGCCGTGGGCGCGGCGCGAGGGTGGCCGCGCCGGCGGGGGACAGCGGCAAGGGCGCCCAGGCGGAGTGGCTGCGGATCTACGACGGGATCGTGGCGATGCTGCGCAAGACGCAGGCGCAGGTGGAGGAGCTCGTCGCGGAGCGCGACCACCTCGCGGCCTTCGTCAAGATCCAGCACGACTTCATGGTCTCCCGCGTCGGCCGCCTCCAGTCCTCCCTGCAGCAGGCGAGGAAGGCGGACACCATCAGGAAGAGGTATGAGGCGGCCAACATGGAGATCCTTATTGGGGACAAGGAGCGGGAGGCCCGCTCCTACCAGAAGATTGCTGAACTCACGGAGAATGATTTGGAGGACTTCAGAACTTCTATAGCTGCTTTGGCTGCAGAAAACTATGAACTGAAGGAAAAACTGAAGGAAGTGGAAAGGCATGCAGAACTTGCTGAAAACACTGTTGATCACCACATTCACAGTCCAAGAGATTTAAGAGCAGAGTTAAAAAAACTAAAGCACGCCTACAAGACTTTGAGCTCTGAAAAGGAAAAGGAAGTTTCTGCATTACGTGCAGAAAATGATTTTGTGTGGAACCAGTTGAGGACAATGGAGAATGATTATACTGATCTCCTTAAGAAGAAAAAAATAGAGGCAGCACAAGCTACTGAAGCTGCACAAAAGCTTCAGAAGAATTTAGAAGAGCTGCAAGATCAAAATAAGGGCAACGAGATCGGCAGATTACAAGCAGAAGCTGTTGATGCCAAAATGAACATATCAATTCTTGAGGATAAGCTACAGGAAATGCTTTCCTTGGTGAAGGAGAAAGACTTGGAAATTGAACAACTCAAACATGGTCAGCCTATGACCAGTCAGATCAACAAAAAGGATATCAACCAGAAGAACAGAAAATGTAGGTCCCAAGACCCTCCTTCAAGGGACAAATCAACAAATTTGCAAGCCACACCGCCTGGGAGAAAAGTGAAGATTTCCA GACAGCATGCATCAAGTTCAAAACAGAAGCAAGTCCAGTCAAGAAATAATTCTCGTAGGCAAAAATTAGAAGGTGATAAGTCTGAGGTTGGCGAAAAGCGGAAGCGTGCCTTGCCATCATCCAGTGGTCTGCAACGATGTTCCGCAAGGCAGCAGGCGAAATCCTCTGCATCTCCAGTGGTCCAGCCATTACTCTTCTCCCCGATATTCCGGGTTCCAAAGGTGAAGACCCCGACTCCTCCATAGCCACAAGCAGTCAGTTCCCCCCAGGACCAGGTCACCAGGAGCCAGCCACAGTAGGTCTGATATCCTGACTTGTGCAGCTGTTGATAGGGATTGTGGCACTGACAGTTGATGAGGCTAACCTTAATTCCCAGGAACTGCATCTGCATTGCTCCTTTATGCTCCCAGTAGGTCATTGGTGTGTTTGTAGCATACTTGACGCAGCTCTTGAACAAAAAAAAAAAATGTAGGCTATGTTAGAACGATTTTTTTCTTCATCTTTTCCTTGTGGAATGCGATGTGTATTATTTAGGCACACACCCTTGGTGGTGAGAAATTTGTCGATGCCCCATAGTGTCAGATTGGCTTGATCTGAATGAGTTCTGCGTAAATTTTTTTTCCATTGTTCGGTGTATGAACTCTGAATGCCAGGAGGCTATGTATTTTGTTGTGTATATATGTAATGTACGTATCTCGTACATCGTTAA] [+] EMBL AU068288 [ CATCCTTCTCCCTTTCCAAATTTCAAAATCCATCCATGGCCGGCGGCGGCGGCGGCCGTGGGCGCGGCGCGAGGGTGGCCGCGCCGGCGGGGGACAGCGGCAAGGGCGCCCAGGCGGAGTGGCTGCGGATCTACGACGGGATCGTGGCGATGCTGCGCAAGACGCAGGCGCAGGTGGAGGAGCTCGTCGCGGA NCGACCACCTCGCGGCCTTCGTCAAGATCCAGCACGACTTCATGGTCTCCCGCNTCGGCCGCCTCCAGTCCTCCCTGCAGCAGGCGAGGAAGGCGGACGCCATCAGGAAGAGGTATGAGGCGGCCAACATGGA ] [+] EMBL CF323365 [ TGGAACCAGTTGAGGACAATGGAGAATGATTATACTGATCTCCTTAAGAAGAAAAAAATAGAGGCAGCACAAGCTACTGAAGCTGCACAAAAGCTTCAGAAGAATTTAGAAGAGCTGCAAGATCAAAATAAGGGCAACGAGATCGGCAGATTACAAGCAGAAGCTGTTGATGCCAAAATGAACATATCAATTCTTGAGGATAAGCTACAGGAAATGCTTTCCTTGGTGAAGGAGAAAGACTTGGAAATTGAACAACTCAAACATGGTCAGCCTATGACCAGTCAGATCAACAAAAAGGATATCAACCAGAAGAACAGAAAATGTAGGTCCCAAGACCCTCCTTCAAGGGACAAATCAACAAATTTGCAAGCCACACCGCCTGGGAGAAAAGTGAAGATTTCCA GACAGCATGCATCAAGTTCAAAACAGAAGCAAGTCCAGTCAAGAAATAATTCTCGTAGGCAAAA ] [+] EMBL C26717 [ TTAAGAAGAAAAAAATAGAGGCAGCACAAGNTACTGAAGCTGCACAAAAGCTTCAGAAGANTTTAGAAGAGCTGCAAGATCAAAATAAGGGCAACGAGATCGGCAGATTACAAGCAGAAGCTGTTGATGCCAAANTGAACATATCANTTCTTGAGGATAAGCTACAGGAAATGCTTTCCTTGGTGAAGGAGAAAGACTTGGAAATTGAACAACTCAAACATGGTCAGCCTATGACCAGTCAGATCAACAAAAAGGATATCAACCAGAAGAACAGAAAATGTAGGTCCCAAGACCCTCCTTCAAGGGACAAATCANCAAATTTGCAAGCCACACCGCCTGGGAGAAAAGTGAGGTTTTCCAGGACAGCATGCATCANGTTC AAACAGg ] [+] EMBL AU068289 [ CAACGATGTTCCGCAAGGCAGCAGGCGAAATCCTCTGNATCTCCAGTGGTCCAGCCATTACTCTTCTCCCCAATATTCCGGGTTCCAAAGGTGAAGNCCCCGACTCCTCCATAGCCACAAGCAGTCAGTTCCCCCCAGGACCAGGTCACCAGGAGCCAGCCACAGTAGGTCTGATATCCTGACTTGTGCAGCTGTTGATAGGGATTGTGGCACTGACAGTTGATGAGGCTAACCTTAATTCCCAGGAACTGCATCTGCATTGCTCCTTTATGCTCCCAGTAGGTCATTGGTGTGTTTGTAGCATACTTGACGCAGCTCTTGAACAAAAAAAAAAAAaaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||