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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7834 cluster # 7834       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7834#0 length = 587 sequences # 5  

consensusID : consensus_7834#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 587
fasta sequence
                              [CGCCAACGCCAAGCACCCACCCCCCTCACCCGCCGCCATGCTGCCGCCGCCCCTCTACTGCCCCCCCGCCGCCGCCAGGCCCTCCACCCCGGCCCCCGCGCGTGCAACCTTCCGGCAGCAGCAGCAGCAGCTCTCCGCCACCGCGTCCTCGTCGTCGGACGCCGACGCGCTCCAACCGGCGGCAGCCGCAGACGACCGGCTGGAGATCGTCGTCTCCGATGAGCAGCCCGCGCCGTCCGCCGCCGCCGGCGGACAGGCAGAAGAACATCCTCATCCTCCTCCTCCTGCCGCTGCCGCGGGCCATCGATGACTACTGTTGCATAGAGAGGCAGCGAAGCAGTGCTGTAGTCTGACACGTGTACCAGCTGTTATACGCCAGATGGATGGTTGGTCGAGAAGGGATTATGATGTGTTTAGGATCACGTAGGGGCCAGTCTTGTTTAATTGTTATTAACATTGTTTTTACAGGCTTCTGATTTCAGTTCTAGTTCGAGCCATGGTAG-TTTTTTTTCCCGCTTCGTAGTATACTTGCATGTACATTCTTGAATCCAATGGACTTGATTTGNATCAANNNNNNNNNNNNNNNN]

[+] EMBL CA754244             [CGCCAACGCCAAGCACCCACCCCCCTCACCCGCCGCCATGCTGCCGCCGCCCCTCTACTGCCCCCCCGCCGCCGCCAGGCCCTCCACCCCGGCCCCCGCGCGTGCAACCTTCCGGCAGCAGCAGCAGCAGCTCTCCGCCACCGCGTCCTCGTCGTCGGACGCCGACGCGCTCCAACCGGCGGCAGCCGCAGACGACCGGCTGGAGATCGTCGTCTCCGATGAGCAGCCCGCGCCGTCCGCCGCCGCCGGCGGACAGGCAGAAGAACATCCTCATCCTCCTCCTCCTGCCGCTGCCGCGGGCCATCGATGACTACTGTTGCATAGAGAGGCAGCGAAGCAGTGCTGTAGTCTGACACGTGTACCAGCTGTTATACGCCAGATGGATGGTTGGTCGAGAAGGGATTATGATGTGTTTAGGATCACGTAGGGGCCAGTCTTGTTTAATTGTTATTAACATTGTTTTTACAGGCTTCTGATTTCAGTTCTAGTTCGAGCCATGGTAGTTTTTTTTTCCCGCTTCGTAGTATACTTGCATGTACATTCTTGAATCCNATGGACTTGATTTGNATCAANNNNNNNNNNNNNNNN]
[-] EMBL CB627704             [                         TCCCCCGCCGCCATGCTGCCGCCGCCCCTCTACTGCCCCCCCGCCGCCGCCAGGCCCTCCACCCCGGCCCCCGCGCGTGCAACCTTCCGGCAGCAGCAGCAGCAGCTCTCCGCCACCGCGTCCTCGTCGTCGGACGCCGACGCGCTCCAACCGGCGGCAGCCGCAGACGACCGGCTGGAGATCGTCGTCTCCGATGAGCAGCCCGCGCCGTCCGCCGCCGCCGGCGGACAGGCAGAAGAACATCCTCATCCTCCTCCTCCTGCCGCTGCCGCGGGCCATCGATGACTACTGTTGCATAGAGAGGCAGCGAAGCAGTGCTGTAGTCTGACACGTGTACCAGCTGTTATACGCCAGATGGATGGTTGGTCGAGAAGGGATTATGATGTGTTTAGGATCACGTAGGGGCCAGTCTTGTTTAATTGTTATTAACATTGTTTTTACAGGCTTCTGATTTCAGTTCTAGTTCGAGCCATGGTAG TTTTTTTTCCCGCTTCGTAGTATACTTGCGTGTACATTCTTGAATCCAATGGACTTGATTTGa                     ]
[-] EMBL CB627666             [                                    CATTGTGCCGCCGCCCCTCTACTGCCCCCCCGCCGCCGCCAGGCCCTCCACCCCGGCCCCCGCGCGTGCAACCTTCCGGCAGCAGCAGCAGCAGCTCTCCGCCACCGCGTCCTCGTCGTCGGACGCCGACGCGCTCCAACCGGCGGCAGCCGCAGACGACCGGCTGGAGATCGTCGTCTCCGATGAGCAGCCCGCGCCGTCCGCCGCCGCCGGCGGACAGGCAGAAGAACATCCTCATCCTCCTCCTCCTGCCGCTGCCGCGGGCCATCGATGACTACTGTTGCATAGAGAGGCAGCGAAGCAGTGCTGTAGTCTGACACGTGTACCAGCTGTTATACGCCAGATGGATGGTTGGTCGAGAAGGGATTATGATGTGTTTAGGATCACGTAGGGGCCAGTCTTGTTTAATTGTTATTAACATTGTTTTTACAGGCTTCTGATTTCAGTTCTAGTTCGAGCCATGGTAG TTTTTTTTCCCGCTTCGTAGTATACTTGCATGTACATTCTTGAATCCAATGGACTT                            ]
[-] EMBL CB627593             [                                        CTGCCGCCGCCCCTCTACTGCCCCCCCGCCGCCGCCAGGCCCTCCACCCCGGCCCCCGCGCGTGCAACCTTCCGGCAGCAGCAGCAGCAGCTCTCCGCCACCGCGTCCTCGTCGTCGGACGCCGACGCGCTCCAACCGGCGGCAGCCGCAGACGACCGGCTGGAGATCGTCGTCTCCGATGAGCAGCCCGCGCCGTCCGCCGCCGCCGGCGGACAGGCAGAAGAACATCCTCATCCTCCTCCTCCTGCCGCTGCCGCGGGCCATCGATGACTACTGTTGCATAGAGAGGCAGCGAAGCAGTGCTGTAGTCTGACACGTGTACCAGCTGTTATACGCCAGATGGATGGTTGGTCGAGAAGGGATTATGATGTGTTTAGGATCACGTAGGGGCCAGTCTTGTTTAATTGTTATTAACATTGTTTTTACAGGCTTCTGATTTCAGTTCTAGTTCGAGCCATGGTAG TTTTTTTTCCCGCTTCGTAGTATACTTGCATGTACATTCTTGAATCCAATGGACTT                            ]
[-] EMBL CB627703             [                                                                                                                             AGCAGCTTTCCGCCACCGCGTCCTAGTCGTCGGACGCCGACGCGTTCCAACCGGTGGCAGCCGCAGACGACCGGCTGGAGATAGTCGTCTCCGATGAGCAGCCCGCGCCGTCCGCCGCCGCCGGCGGACAGGCAGAAGAACATCCTCATCCTCCTCCTCCTGCCGTTGCCGCGGGCCATCGATGACTACTGTTGCATAGAGAGGCAGCGAAGCAGTGCTGTATTTTGACACGTGTTCCAGTTGTTA                                                                                                                                                                                                                         ]


>consensus_7834#0 CGCCAACGCCAAGCACCCACCCCCCTCACCCGCCGCCATGCTGCCGCCGCCCCTCTACTG CCCCCCCGCCGCCGCCAGGCCCTCCACCCCGGCCCCCGCGCGTGCAACCTTCCGGCAGCA GCAGCAGCAGCTCTCCGCCACCGCGTCCTCGTCGTCGGACGCCGACGCGCTCCAACCGGC GGCAGCCGCAGACGACCGGCTGGAGATCGTCGTCTCCGATGAGCAGCCCGCGCCGTCCGC CGCCGCCGGCGGACAGGCAGAAGAACATCCTCATCCTCCTCCTCCTGCCGCTGCCGCGGG CCATCGATGACTACTGTTGCATAGAGAGGCAGCGAAGCAGTGCTGTAGTCTGACACGTGT ACCAGCTGTTATACGCCAGATGGATGGTTGGTCGAGAAGGGATTATGATGTGTTTAGGAT CACGTAGGGGCCAGTCTTGTTTAATTGTTATTAACATTGTTTTTACAGGCTTCTGATTTC AGTTCTAGTTCGAGCCATGGTAGTTTTTTTTCCCGCTTCGTAGTATACTTGCATGTACAT TCTTGAATCCAATGGACTTGATTTGNATCAANNNNNNNNNNNNNNNN



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)