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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7839#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 4053 fasta sequence
[TTTCGTTGCTTCCCCACCCGAGCTCTCTCTTCGCCCTCCTCCTCTCCCCAATCCCCATCCGCCGCAACCCCCACAGATTCGCGTGATTCGTGTTCTTCGCGTGCGGCGCGCCTAATCATCTCGTGGGGAGCAGCAAAGGCCAAAAAAAAGGTTGGATGGGCACGCCGCTTTTCTTCCCCTCATTCGTCCCAAATTCATTTCTTTAGTCAAAAAGATTCTCCTCTTTCCTTCAATCTTTCTCCCCACCCTCCAATCTTCTAGTTTCTCCTTCAATTCTTCCTCCCCCAGGTCGGCATAGCATCTGCATTCTTGCAGGCACGGTCCCGAACGCCCAGATTGCTCGCGGGATCGATATCTTGTAGCCGCCAAGAATCGCGGCGAAGTGACCAATCCGGTGCAAGGGAGATTCTTGGAAGGAATCCCCCTCCTTCTGGAGCACAACATTTTGGAGGAGGCCAAGATTTCTTGAGCGCCGGTGGGCGTGGCCGAGGATGATTCAGCTGCTGTTCCTGGTGCTGTTCGCGGAGGGCGCGGCGGCGCTGCTGCTGATGGTGAAGATCGGGCCGCTGCGGGAGCTGGCGATGCGCGGCGTGGAGCAGGCCAAGGACGGTAAAGGCCCCGCGGCGGTGAAGACGCTGGCGTGCACGCTGCTCGTCATCTTCATGTCCAGCGTCGCCAGCATCCTCCGGATCCAGAACCGCGGCATCAAGCTCGGCACCGTCAGCCCCATGGACCAGGTGCTATGGCGGACGCACCTCCTCGAGGCTTCCCTCATTGGTATCCCCCTCTCTTCCTCGTCTCTTACCATTTTCATTTTTTTTACCTCCACTTGGTGGAATCTGTACAATTGTACTGTAGGTGGTGGCAATGATTGGGGTTTAGGGGTGGATTTAGTTGATTTTTTTGGTAATTAAGAGAGCAGTTCATCTGAAGGAATGTTTGTTGGGCAATCTCTTCTTGACTGCTTGTTATTAGCCTGAATTCGTCTAGATATGTGTTGTTTAATGCATCTAGATCTGCTGGTCAACATGTTTAGAATATATAATGGTGGTTTCAGGTTTTTATATGATTGATTGCTTACTAAGCTACTAACTTGCTAGTAGTAGCAAGTTTGTGTTGACTCGAACCAATAAATACTACCCATCTTGCGTCTAAATTTGATTAGTCATGTCAGCAGCCAGTAGAAGCTCCTGTTCTGTGCTTAGCTAGGAAACCTCCTGCTGCTAAAATGAAAATGATGTCTAGTACTCTAGTTTGAGTAAGGAGTGTCCTAAAGGCTAAAGGGAAGATTTATTTTCCTCATATTTGAACTCATTGTGTGGTGTGTGGTGTGTGTGTGTGTGCTGTATCTTCAAGTTGAAAACACTGTTTCAAAAAAAAGAGAGAATAGATCCAAGGCACACACCACCAAATGCCATGACTTATTTCTCGATTTTTATGAAAAATAAGAAAATGAATGTTGTGTATTCCAAATCTACATCTCAGTGAAGCATATGAGCACTAAGTTTCAATAGCTCCAGTTAGCAAGAAACCAATATGGAATGTAAAGGCTATGAAGCTGTAAACCACTAAAAAGATCTGTCGACTATGGAATTGAAACATAGGTCTCAACATGCACAAGTTCAGAACTTCAGATCACAATATGAACTCATCAGTTCTGTACTTTGGCAGTTTTTTAGAAAAAAATGATAAGCTTTTTTAGGTCTATTCTTATACACCTAGTCATTCAGGAACACAAATTTTCAGATGCAGGAATTATATGCTTTACAAAGCTAACAGTCCGTGCGACAAATTTGTATGTTGCTTGTCCTAGTGTTTGTACTTTAGTCTTAGGGAGTCTTAGAATTGATGCACTTTTTTTACTGTTTATTCAATGTCCAAAGTTCCAAATATTACGACTGCGAAATTCCACTCCCCTGACTTGGACTAAGAACTTAGGTCATGAAATAAACTAGGGTGCTAGGCTATTCAAATTGGTCTGTCACTGTGTCCATTTTGATAACTGGTATGCCATACAATCGAACTGATGACAAACATCCTTACAGGTTCATAGAGAAATGGAAAAAATGACATCAGTGAGCAAATAAATTGAACTTTGTGAAAGTGAACATCTTAGTAATGGTTTGAAGGTTTGTTTGGATAATACTTATGAATATTGTAGTAAGCAGTGATTATTCATGTTTCTTCTTGGTGGCTCTGCGATTCACACGATTGCTTAGGTATGCATTGTTGCAGTACATTTAGGATTTTCATACAAGGAATTTAGAGAACAAGGCATTGAAGTTAACTTTGTAAAGAGTTAAACTTAAAATGCCTGCACTAAAATTTAGAGAACAAGGCATTGAAGTTAACTTTGTAAAGAGTTAAACTTAAAATGCCTGCACTAAAATAAACAAGGATGGTAGTTGATATTTCCCATTGATATAGGGTCTTTACTCTTTAGTTGTACTGGTTGAATCATGAATAGCTTTGACGCTCTTTTGAATACCAAAATGTACAAATCTCAAAGCAGTACTGTTATGTAAAACTGCATTGTTGGCTGGGTGCCTAACAGCAGGGGCTGGGAGTGCAATCCATTTCCATTATCTAAAATAAATGCAAAACCGTATTATTCTTTGAAATGTTTTTTATATATATTATGTATAATGCTATATACCGGAGTTGGTGCAATTTTGTTCTAACCGTATAATTTAGAGTCACTCAAGAAAATCCTCTTTCAACTTAAGATTCAAATTATAGAACCAGATCAAAATATCATGTCTACATAGAGTTTGTCAAGGAAGTCCTTTTATTGTAGGGATAAGCTTTATATAGTCTGATTCCATTGGTAAACTGCGGTGGGTACCTGGTGCCTGAGAAATAATCCTTGCTGATAAGACATCAATTTATTTTCTTTGTTCAACTAGACATATAATAATGACTTTGAGTGTGTGAGCAGCTTGGTAACCAGTTCAATTCAAAATTTGCATTTAAATTTGAGCAGATTAGAAGCCCTGAAGGCCTGAACCAATCATTTATATTAACTTCGAACTTATGTGCCTTCAATTGTATCTGTCGATGTAGTGGGGCTTTTCCCCTGGGAAATCGCATGAAGTAATGTGGATTGGAGAAATAATGCTGGATATGATTAAATAGATATTGAGATATAATGGCATTCCCCATGAGGAAGCGTTCCATTCTGTTACTAAGCTATATACTCTGATCCCTTAAAATTGATAAAAGTACAAATATTAGTAGTCTGTGTGATATTCACTGTGTCGCACTTATAAAGAAGTAATGATAATACTGTGTGTGGTAGACATGTTGCTTATCTACAGGCGAGTTTTTTGACCTTCCTTTTGTACTCAAAATTTATTCTATAGACTGGAAAGGAAAGACAAACAAGGAGACTAGGATCATTTCTAGTGTATAGACTTTAGATTTGTCTGGAACAAATCAGGAAACCAGAATAACTGTCTGGGTAGAAGGATCCTTTAACCCTGCTGCACATATTTGTAGGCCATTTGATTTGATACAAGTGAATTTGATGGTTTACTTGATGTTCCAGGGTACATACTATTCCTTGCATTTGTCATTGATCGGTTACACCACTACCACCGGAAGCTGACTATACTGAAGAAAACCGCAAACACCTCCAGGGAGGAGG-TTGAGAA-ACTACA-AATTGAG-CTCCA-AGGCAA-GGAAGAT-AAAT-CCAAGGAAGT-CAAGAAGCTTCGTGCGGAATTAGCCAGCCTTAGTGAAAAGATGAAGAAGCTAAAATCAGAATCGGAGGAGCATGAAAGGCAGAGATTGGAGGCCGAAGCACATGTCAATGCCCTACAGAAGCA-ATCTGAGGAGCTCCTGCTTGAATATGACCGGTTATTGGAAGATAACCAGATATTACAGACACAGGTTCTTTCTCTCAGAAGCTGAGTCTGCAAATGTACAACTTGTGTGATGGCCATACTCTTACAAAAGGGGGATTGGATTGCTATGATTTTATTTACTAGCTCAGATCTCTGTAAGATATCATTTGTCATGTCTTTGTTGCTCCATGTTCTTTTTGTGACAGCTTAAAAA]
[+] EMBL AK064969 [TTTCGTTGCTTCCCCACCCGAGCTCTCTCTTCGCCCTCCTCCTCTCCCCAATCCCCATCCGCCGCAACCCCCACAGATTCGCGTGATTCGTGTTCTTCGCGTGCGGCGCGCCTAATCATCTCGTGGGGAGCAGCAAAGGCCAAAAAAAAGGTTGGATGGGCACGCCGCTTTTCTTCCCCTCATTCGTCCCAAATTCATTTCTTTAGTCAAAAAGATTCTCCTCTTTCCTTCAATCTTTCTCCCCACCCTCCAATCTTCTAGTTTCTCCTTCAATTCTTCCTCCCCCAGGTCGGCATAGCATCTGCATTCTTGCAGGCACGGTCCCGAACGCCCAGATTGCTCGCGGGATCGATATCTTGTAGCCGCCAAGAATCGCGGCGAAGTGACCAATCCGGTGCAAGGGAGATTCTTGGAAGGAATCCCCCTCCTTCTGGAGCACAACATTTTGGAGGAGGCCAAGATTTCTTGAGCGCCGGTGGGCGTGGCCGAGGATGATTCAGCTGCTGTTCCTGGTGCTGTTCGCGGAGGGCGCGGCGGCGCTGCTGCTGATGGTGAAGATCGGGCCGCTGCGGGAGCTGGCGATGCGCGGCGTGGAGCAGGCCAAGGACGGTAAAGGCCCCGCGGCGGTGAAGACGCTGGCGTGCACGCTGCTCGTCATCTTCATGTCCAGCGTCGCCAGCATCCTCCGGATCCAGAACCGCGGCATCAAGCTCGGCACCGTCAGCCCCATGGACCAGGTGCTATGGCGGACGCACCTCCTCGAGGCTTCCCTCATTGGTATCCCCCTCTCTTCCTCGTCTCTTACCATTTTCATTTTTTTTACCTCCACTTGGTGGAATCTGTACAATTGTACTGTAGGTGGTGGCAATGATTGGGGTTTAGGGGTGGATTTAGTTGATTTTTTTGGTAATTAAGAGAGCAGTTCATCTGAAGGAATGTTTGTTGGGCAATCTCTTCTTGACTGCTTGTTATTAGCCTGAATTCGTCTAGATATGTGTTGTTTAATGCATCTAGATCTGCTGGTCAACATGTTTAGAATATATAATGGTGGTTTCAGGTTTTTATATGATTGATTGCTTACTAAGCTACTAACTTGCTAGTAGTAGCAAGTTTGTGTTGACTCGAACCAATAAATACTACCCATCTTGCGTCTAAATTTGATTAGTCATGTCAGCAGCCAGTAGAAGCTCCTGTTCTGTGCTTAGCTAGGAAACCTCCTGCTGCTAAAATGAAAATGATGTCTAGTACTCTAGTTTGAGTAAGGAGTGTCCTAAAGGCTAAAGGGAAGATTTATTTTCCTCATATTTGAACTCATTGTGTGGTGTGTGGTGTGTGTGTGTGTGCTGTATCTTCAAGTTGAAAACACTGTTTCAAAAAAAAGAGAGAATAGATCCAAGGCACACACCACCAAATGCCATGACTTATTTCTCGATTTTTATGAAAAATAAGAAAATGAATGTTGTGTATTCCAAATCTACATCTCAGTGAAGCATATGAGCACTAAGTTTCAATAGCTCCAGTTAGCAAGAAACCAATATGGAATGTAAAGGCTATGAAGCTGTAAACCACTAAAAAGATCTGTCGACTATGGAATTGAAACATAGGTCTCAACATGCACAAGTTCAGAACTTCAGATCACAATATGAACTCATCAGTTCTGTACTTTGGCAGTTTTTTAGAAAAAAATGATAAGCTTTTTTAGGTCTATTCTTATACACCTAGTCATTCAGGAACACAAATTTTCAGATGCAGGAATTATATGCTTTACAAAGCTAACAGTCCGTGCGACAAATTTGTATGTTGCTTGTCCTAGTGTTTGTACTTTAGTCTTAGGGAGTCTTAGAATTGATGCACTTTTTTTACTGTTTATTCAATGTCCAAAGTTCCAAATATTACGACTGCGAAATTCCACTCCCCTGACTTGGACTAAGAACTTAGGTCATGAAATAAACTAGGGTGCTAGGCTATTCAAATTGGTCTGTCACTGTGTCCATTTTGATAACTGGTATGCCATACAATCGAACTGATGACAAACATCCTTACAGGTTCATAGAGAAATGGAAAAAATGACATCAGTGAGCAAATAAATTGAACTTTGTGAAAGTGAACATCTTAGTAATGGTTTGAAGGTTTGTTTGGATAATACTTATGAATATTGTAGTAAGCAGTGATTATTCATGTTTCTTCTTGGTGGCTCTGCGATTCACACGATTGCTTAGGTATGCATTGTTGCAGTACATTTAGGATTTTCATACAAGGAATTTAGAGAACAAGGCATTGAAGTTAACTTTGTAAAGAGTTAAACTTAAAATGCCTGCACTAAAATTTAGAGAACAAGGCATTGAAGTTAACTTTGTAAAGAGTTAAACTTAAAATGCCTGCACTAAAATAAACAAGGATGGTAGTTGATATTTCCCATTGATATAGGGTCTTTACTCTTTAGTTGTACTGGTTGAATCATGAATAGCTTTGACGCTCTTTTGAATACCAAAATGTACAAATCTCAAAGCAGTACTGTTATGTAAAACTGCATTGTTGGCTGGGTGCCTAACAGCAGGGGCTGGGAGTGCAATCCATTTCCATTATCTAAAATAAATGCAAAACCGTATTATTCTTTGAAATGTTTTTTATATATATTATGTATAATGCTATATACCGGAGTTGGTGCAATTTTGTTCTAACCGTATAATTTAGAGTCACTCAAGAAAATCCTCTTTCAACTTAAGATTCAAATTATAGAACCAGATCAAAATATCATGTCTACATAGAGTTTGTCAAGGAAGTCCTTTTATTGTAGGGATAAGCTTTATATAGTCTGATTCCATTGGTAAACTGCGGTGGGTACCTGGTGCCTGAGAAATAATCCTTGCTGATAAGACATCAATTTATTTTCTTTGTTCAACTAGACATATAATAATGACTTTGAGTGTGTGAGCAGCTTGGTAACCAGTTCAATTCAAAATTTGCATTTAAATTTGAGCAGATTAGAAGCCCTGAAGGCCTGAACCAATCATTTATATTAACTTCGAACTTATGTGCCTTCAATTGTATCTGTCGATGTAGTGGGGCTTTTCCCCTGGGAAATCGCATGAAGTAATGTGGATTGGAGAAATAATGCTGGATATGATTAAATAGATATTGAGATATAATGGCATTCCCCATGAGGAAGCGTTCCATTCTGTTACTAAGCTATATACTCTGATCCCTTAAAATTGATAAAAGTACAAATATTAGTAGTCTGTGTGATATTCACTGTGTCGCACTTATAAAGAAGTAATGATAATACTGTGTGTGGTAGACATGTTGCTTATCTACAGGCGAGTTTTTTGACCTTCCTTTTGTACTCAAAATTTATTCTATAGACTGGAAAGGAAAGACAAACAAGGAGACTAGGATCATTTCTAGTGTATAGACTTTAGATTTGTCTGGAACAAATCAGGAAACCAGAATAACTGTCTGGGTAGAAGGATCCTTTAACCCTGCTGCACATATTTGTAGGCCATTTGATTTGATACAAGTGAATTTGATGGTTTACTTGATGTTCCAGGGTACATACTATTCCTTGCATTTGTCATTGATCGGTTACACCACTACCACCGGAAGCTGACTATACTGAAGAAAACCGCAAACACCTCCAGGGAGGAGG TTGAGAA ACTACA AATTGAG CTCCA AGGCAA GGAAGAT AAAT CCAAGGAAGT CAAGAAGCTTCGTGCGGAATTAGCCAGCCTTAGTGAAAAGATGAAGAAGCTAAAATCAGAATCGGAGGAGCATGAAAGGCAGAGATTGGAGGCCGAAGCACATGTCAATGCCCTACAGAAGCA ATCTGAGGAGCTCCTGCTTGAATATGACCGGTTATTGGAAGATAACCAGATATTACAGACACAGGTTCTTTCTCTCAGAAGCTGAGTCTGCAAATGTACAACTTGTGTGATGGCCATACTCTTACAAAAGGGGGATTGGATTGCTATGATTTTATTTACTAGCTCAGA ]
[+] EMBL BI800846 [ GAGGTTTGAGAATACTACACAATTGAGCCTCCACAAGCAAGGGAAGATAAAATCCCAAGGAAGTCCAAGAAGCTTCGT CGGAATTACCCA CCTTAGTGAAAAGATGAAGAAGCT AAATCAGAATCGGAGGAGCATGAAAGGCAGAGATTGGAGGCCGAAGCACATGTCAATGCCCTACCAAAGCACATCTGAGGAGCTCCTGCTTGAATATGACCGGTTATTGGAAGATAACCA ATATTACAGACACAGGTTCTTTCTCTCAGAAGCTGAGTCTGCAAATGTACAACTTGTGTGATGGCCATACTCTTACAAAAGGGGGATTGGACTGCTATGATTTTATTTACTAGCTCAGATCTCTGTAAGATATCATTTGTCATGTCTTTGTTGCTCCATGTTCTTTTTGTGACAGCTTAAAAA]
consensusID : consensus_7839#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1616 fasta sequence
[TGAACTTTCACACTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCAGCTGAGTGAGCTGCTTGCACGCCGCCTTCCTGCTCGTCGCCTTTCGCCGCCGCCATCTCTCTCTACTCTACTCTAATGCCTCGGCGCCTTTACTAGTTAATTAGTTCTTCTTTAGCATCGTACCATAATCTGCCCACACGGCTACAGACTCTTGATTGGTTTGAGATTGAGCTATTGGGTTGGTTCTTGGCAAGAGAAGGCAAGGCCAAGAAAGGTGGCAGGTTCTTGTCAATCTCCAAATTTTCCCATTAAATTTGCGATTTCTTCCCCACTCCTCCCCGTCAGAACCGAGGTTTTACCAGGAGTGCTTCAGCATTTGGGGTGTGGAGTTATTGCAAAGCAACCTCGATTCCTGCACCGGTTCCTCGATTTGATGCTGAAGAAATTGAGCAAAGCTGGTCTTCGTTTTGGTAAAACCCCCAGCTTTCTCAGGGCGGAACAGTAGAAGAAAAAGATTGGAGGAGAGGAGAGGAGAGGAAGGGTTGGTTTTGGGAGGATGATTCAGCTGCTGTTCTTGGTGGTGTTGGCGGAGGCGGCGGTGGCGCTGCTGCTGATGGTGAAGGTGGGGCCGCTGCGGGAGGTGGCGATGCGCGGCGTGGAGCAGGCGAAGACGGGGAAGGGCCCGGCGACGGTGAAGACGCTGGCCTGCACGCTCTCGGTGATCCTCATGTCCAGCGTCGCCAGCATCCTCAAGATCCAGAACAGGGGCCTCAAGCTCGGCACCGTCAGCCCCATGGACCAGGTGCTATGGCGGACTCACCTCCTCGAGGCCTCCCTCATCGGATTTACTCTATTCCTTGCATTTGTCATTGACCGGTTGCACCACTACCTCCGAAAACTGATTACACTGAGGAAAGCAGCCAACACATCAAGAGAGGAGGTCGAGAAACTTCAAATGGAGAACCGGTTATTCCGTGAAAAGGAGGAGAAATCTTCCAGTGAAATCAAGAAGCTCCACCAGGAGATTGCTAAGCTAAACGAGAGTATGAAGAAGCTGAAATCGGAGTCTGAAGATCACGAGAGGAAGGTGTTGGAAGCGGAGGCCCATGTGAACGCCCTACAGAAGCAGTCGGAGGAGCTTCTCCTGGAGTACGACAGGTTGCTGGAAGACAACCAGATTCTACAATCTCAGCTTCACTACAAAGGCTGAAACAGTTAACCTGGGGCATGCAACTCAAAGTGCTCGTTACCAAGACTCGTAGACTTACCAAATGTCAGTGCAGAGCGAAGGTATTGGTGAATGTGATGCTTGGAATCCTTGCTCTAACTTGTGGTGTTGGGTTGATGTACTAGTGTGTGCATTTGTAGTTTTGAGGAGTATAAAAGCCAGGGATGATATATGGTGAAATGGTTATGAATCTGGTATCAGTTCATGTCGCCATGCAGGGTTGTTGATCTGAAAACTGAATTGAACTTGTGGGCTGCGGCCATGCCTCTATTCAGGCCTTGATCTGAAAATCTGAAAAGGAGGAAAGTTTCCTACTGAAATGAATGCTCTGTTAGCTTTGCTAAAACCGGGCTAGGATGGATCGTTTTATTTGTGTGAATAACTTAGAATATATTCTGG]
[+] EMBL AK067600 [TGAACTTTCACACTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCAGCTGAGTGAGCTGCTTGCACGCCGCCTTCCTGCTCGTCGCCTTTCGCCGCCGCCATCTCTCTCTACTCTACTCTAATGCCTCGGCGCCTTTACTAGTTAATTAGTTCTTCTTTAGCATCGTACCATAATCTGCCCACACGGCTACAGACTCTTGATTGGTTTGAGATTGAGCTATTGGGTTGGTTCTTGGCAAGAGAAGGCAAGGCCAAGAAAGGTGGCAGGTTCTTGTCAATCTCCAAATTTTCCCATTAAATTTGCGATTTCTTCCCCACTCCTCCCCGTCAGAACCGAGGTTTTACCAGGAGTGCTTCAGCATTTGGGGTGTGGAGTTATTGCAAAGCAACCTCGATTCCTGCACCGGTTCCTCGATTTGATGCTGAAGAAATTGAGCAAAGCTGGTCTTCGTTTTGGTAAAACCCCCAGCTTTCTCAGGGCGGAACAGTAGAAGAAAAAGATTGGAGGAGAGGAGAGGAGAGGAAGGGTTGGTTTTGGGAGGATGATTCAGCTGCTGTTCTTGGTGGTGTTGGCGGAGGCGGCGGTGGCGCTGCTGCTGATGGTGAAGGTGGGGCCGCTGCGGGAGGTGGCGATGCGCGGCGTGGAGCAGGCGAAGACGGGGAAGGGCCCGGCGACGGTGAAGACGCTGGCCTGCACGCTCTCGGTGATCCTCATGTCCAGCGTCGCCAGCATCCTCAAGATCCAGAACAGGGGCCTCAAGCTCGGCACCGTCAGCCCCATGGACCAGGTGCTATGGCGGACTCACCTCCTCGAGGCCTCCCTCATCGGATTTACTCTATTCCTTGCATTTGTCATTGACCGGTTGCACCACTACCTCCGAAAACTGATTACACTGAGGAAAGCAGCCAACACATCAAGAGAGGAGGTCGAGAAACTTCAAATGGAGAACCGGTTATTCCGTGAAAAGGAGGAGAAATCTTCCAGTGAAATCAAGAAGCTCCACCAGGAGATTGCTAAGCTAAACGAGAGTATGAAGAAGCTGAAATCGGAGTCTGAAGATCACGAGAGGAAGGTGTTGGAAGCGGAGGCCCATGTGAACGCCCTACAGAAGCAGTCGGAGGAGCTTCTCCTGGAGTACGACAGGTTGCTGGAAGACAACCAGATTCTACAATCTCAGCTTCACTACAAAGGCTGAAACAGTTAACCTGGGGCATGCAACTCAAAGTGCTCGTTACCAAGACTCGTAGACTTACCAAATGTCAGTGCAGAGCGAAGGTATTGGTGAATGTGATGCTTGGAATCCTTGCTCTAACTTGTGGTGTTGGGTTGATGTACTAGTGTGTGCATTTGTAGTTTTGAGGAGTATAAAAGCCAGGGATGATATATGGTGAAATGGTTATGAATCTGGTATCAGTTCATGTCGCCATGCAGGGTTGTTGATCTGAAAACTGAATTGAACTTGTGGGCTGCGGCCATGCCTCTATTCAGGCCTTGATCTGAAAATCTGAAAAGGAGGAAAGTTTCCTACTGAAATGAATGCTCTGTTAGCTTTGCTAAAACCGGGCTAGGATGGATCGTTTTATTTGTGTGAATAACTTAGAATATATTCTGG]
[+] EMBL AK060400 [ TTCTTTAGCATCGTACCATAATCTGCCCACACGGCTACAGACTCTTGATTGGTTTGAGATTGAGCTATTGGGTTGGTTCTTGGCAAGAGAAGGCAAGGCCAAGAAAGGTGGCAGGTTCTTGTCAATCTCCAAATTTTCCCATTAAATTTGCGATTTCTTCCCCACTCCTCCCCGTCAGAACCGAGGTTTTACCAGGAGTGCTTCAGCATTTGGGGTGTGGAGTTATTGCAAAGCAACCTCGATTCCTGCACCGGTTCCTCGATTTGATGCTGAAGAAATTGAGCAAAGCTGGTCTTCGTTTTGGTAAAACCCCCAGCTTTCTCAGGGCGGAACAGTAGAAGAAAAAGATTGGAGGAGAGGAGAGGAGAGGAAGGGTTGGTTTTGGGAGGATGATTCAGCTGCTGTTCTTGGTGGTGTTGGCGGAGGCGGCGGTGGCGCTGCTGCTGATGGTGAAGGTGGGGCCGCTGCGGGAGGTGGCGATGCGCGGCGTGGAGCAGGCGAAGACGGGGAAGGGCCCGGCGACGGTGAAGACGCTGGCCTGCACGCTCTCGGTGATCCTCATGTCCAGCGTCGCCAGCATCCTCAAGATCCAGAACAGGGGCCTCAAGCTCGGCACCGTCAGCCCCATGGACCAGGTGCTATGGCGGACTCACCTCCTCGAGGCCTCCCTCATCGGATTTACTCTATTCCTTGCATTTGTCATTGACCGGTTGCACCACTACCTCCGAAAACTGATTACACTGAGGAAAGCAGCCAACACATCAAGAGAGGAGGTCGAGAAACTTCAAATGGAGAACCGGTTATTCCGTGAAAAGGAGGAGAAATCTTCCAGTGAAATCAAGAAGCTCCACCAGGAGATTGCTAAGCTAAACGAGAGTATGAAGAAGCTGAAATCGGAGTCTGAAGATCACGAGAGGAAGGTGTTGGAAGCGGAGGCCCATGTGAACGCCCTACAGAAGCAGTCGGAGGAGCTTCTCCTGGAGTACGACAGGTTGCTGGAAGACAACCAGATTCTACAATCTCAGCTTCACTACAAAGGCTGAAACAGTTAACCTGGGGCATGCAACTCAAAGTGCTCGTTACCAAGACTCGTAGACTTACCAAATGTCAGTGCAGAGCGAAGGTATTGGTGAATGTGATGCTTGGAATCCTTGCTCTAACTTGTGGTGTTGGGTTGATGTACTAGTGTGTGCATTTGTAGTTTTGAGGAGTATAAAAGCCAGGGATGATATATGGTGAAATGGTTATGAATCTGGTATCAGTTCATGTCGCCATGCAGGGTTGTTGATCTGAAAACTGAATTGAACTTGTGGGCTGCGGCCATGCCTCTATTCAGGCCTTGATCTGAAAATCTGAAAAGGAGGAAAGTTTCCTACTGAAATGAATGCTCTGT ]
[+] EMBL C27221 [ AAGAGAAGGCAAGG CAAGAAAGGTGGCAGGTTCTTGTCAATCTCCAAATTTTCCCATTAAATTTGCGATTTCTTCCCCACTCCTCCCCGTCAGAACCGAGGTTTTACCAGGAGTGCTTCAG ATTTGGGGTGTGGAGTTATTGCAAAG AACCTCGATTCCTGCACCGGTTCCTCGATTTGATGCTGAAGAAATTGAGCAAAG TGGTCTTCGTTTTGGTAAAACCCCCAGCTTTCTCAGGGCGGAACAGTAGAAGAAAAAGATTGGAGGAGAGGAGAGGAGAGGAAGGGTTGGTTTTNGGAGGATGATTCAGCTGCTGTTCTTGGTNGTG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7839#0 ---------------------------------TTTCGTTGCTTCCCCACCCGAGCTCTC 27
consensus_7839#1 TGAACTTTCACACTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCAGCTGAGTGAGC 60
* * ** *** * *** *
consensus_7839#0 TCTTCGCCCTCCTCCTCTCC-CCAATCCCCATCCGCCGCAACCCCCACAG--------AT 78
consensus_7839#1 TGCTTGCACGCCGCCTTCCTGCTCGTCGCCTTTCGCCGCCGCCATCTCTCTCTACTCTAC 120
* * ** * ** *** * * ** ** * ****** ** * * *
consensus_7839#0 TCGCGTGATTCGTGTTCTTCGCGTGC------GGCGCGCCTAATCATCTCGTGGGGAGCA 132
consensus_7839#1 TCTAATGCCTCGGCGCCTTTACTAGTTAATTAGTTCTTCTTTAGCATCGTACCATAATCT 180
** ** *** *** * * * * * * **** * *
consensus_7839#0 GCAAAGGCCAAAAAAAAGGTTGGATGGGCACGCCGCTT--TTCTTCCCCTCATTCGTCCC 190
consensus_7839#1 GCCCACACGGCTACAGACTCTTGATTGGTTTGAGATTGAGCTATTGGGTTGGTTCTTGGC 240
** * * * * * * *** ** * * * ** * *** * *
consensus_7839#0 AAATTCATTTCTTTAGTCAAAAAGATTCTCCTCTTTCCTTCAATCTTTCTCCCCACCCTC 250
consensus_7839#1 AAGAGAAGGCA--AGGCCAAGAAAGGTGGCAGGTTCTTGTCAATCTCCAAATTTTCCCAT 298
** * * *** ** * * ** ******* ***
consensus_7839#0 CAATCTTCTAGTTTCTCCTTCAATTCTTCCTCCCCCAGGTCGGCATAGCATCTGCATTCT 310
consensus_7839#1 TAAATTTGCGATTTCTTCCCCA-CTCCTCCCCGTCAGAACCGAGGTTTTACCAGGAGTGC 357
** ** ***** * ** ** *** * * ** * * * * * *
consensus_7839#0 TGCAGGCACGGTCCCGAACGCCCAG--ATTGCTC-GCGGGATCGATATCTTGTAGCCG-- 365
consensus_7839#1 TTCAGC----ATTTGGGGTGTGGAGTTATTGCAAAGCAACCTCGAT-TCCTGCACCGGTT 412
* *** * * * ** ***** ** ***** ** ** * * *
consensus_7839#0 CCAAGAATCGCGGCGAAGTGACCAATCCGGTGCAAGGGAGATTCTTGGAAGGAATCCCCC 425
consensus_7839#1 CCTCGATTTGATGCTGAAGAAATTGAGCAAAGCTGGTCTTCGTTTTGGTAAAACCCCCAG 472
** ** * * ** * * * ** * * **** * * ***
consensus_7839#0 TCCTTCTGGAGCACAACATTTT--GGAGGAGGCCA-AGATTTCTTGAGCGCCGGTGGGCG 482
consensus_7839#1 CTTTCTCAGGGCGGAACAGTAGAAGAAAAAGATTGGAGGAGAGGAGAGGAGAGGAAGGGT 532
* * ** **** * * * ** ** *** ** **
consensus_7839#0 TGGCC----GAGGATGATTCAGCTGCTGTTCCTGGTGCTGTTCGCGGAGGGCGCGGCGGC 538
consensus_7839#1 TGGTTTTGGGAGGATGATTCAGCTGCTGTTCTTGGTGGTGTTGGCGGAGGCGGCGGTGGC 592
*** ********************** ***** **** ******* **** ***
consensus_7839#0 GCTGCTGCTGATGGTGAAGATCGGGCCGCTGCGGGAGCTGGCGATGCGCGGCGTGGAGCA 598
consensus_7839#1 GCTGCTGCTGATGGTGAAGGTGGGGCCGCTGCGGGAGGTGGCGATGCGCGGCGTGGAGCA 652
******************* * *************** **********************
consensus_7839#0 GGCCAAGGACGGTAAAGGCCCCGCGGCGGTGAAGACGCTGGCGTGCACGCTGCTCGTCAT 658
consensus_7839#1 GGCGAAGACGGGGAAGGGCCCGGCGACGGTGAAGACGCTGGCCTGCACGCTCTCGGTGAT 712
*** *** ** ** ***** *** **************** ******** ** **
consensus_7839#0 CTTCATGTCCAGCGTCGCCAGCATCCTCCGGATCCAGAACCGCGGCATCAAGCTCGGCAC 718
consensus_7839#1 CCTCATGTCCAGCGTCGCCAGCATCCTCAAGATCCAGAACAGGGGCCTCAAGCTCGGCAC 772
* ************************** ********** * *** *************
consensus_7839#0 CGTCAGCCCCATGGACCAGGTGCTATGGCGGACGCACCTCCTCGAGGCTTCCCTCATTGG 778
consensus_7839#1 CGTCAGCCCCATGGACCAGGTGCTATGGCGGACTCACCTCCTCGAGGCCTCCCTCATCGG 832
********************************* ************** ******** **
consensus_7839#0 TATCCCCCTCTCTTCCTCGTCTCTTACCATTTTCATTTTTTTTACCTCCACTTGGTGGAA 838
consensus_7839#1 ATTTAC--TCTATTCCTTG-CATTTGTCATTG--ACCGGTTGCACCACTACCTC-CGAAA 886
* * *** ***** * * ** **** * ** *** * ** * * **
consensus_7839#0 TCTGTACAATTGTACTGTAGGTGGTGGCAATGATTGGGGTTTAGGGGTGGATTTAGTTGA 898
consensus_7839#1 ACTG----ATTACACTGAGGAAAGCAGCCAACACA-----TCAAGAGAGGAGGTCGA-GA 936
*** *** **** * * ** * * * * * * *** * * **
consensus_7839#0 TTTTTTTGGTAATTAAGAGAGCAGTTCATCTGAAGGAATGTTTGTTGGGCAATCTCTTCT 958
consensus_7839#1 AACTTCAAATGGAGAACCGGTTATTCCGTGAAAAGGAGGAGAAATCTTCCAGTGAAATCA 996
** * ** * * * * * ***** * ** * **
consensus_7839#0 TGACTGCTTGTTATTAGCCTGAATTCGTCTAGATATGTGTTGTTTAATGCATCTAGATCT 1018
consensus_7839#1 AGAAGCTCCACCAGGAGATTG--CTAAGCTAAACGAGAGT---ATGAAGAAGCTGAAATC 1051
** * ** ** * *** * * ** * * * * ** *
consensus_7839#0 GCTGGTCAACATGTTTAGAATATATAATGGTGGTTTCAGGTTTTTATATGATTGATTGCT 1078
consensus_7839#1 GG-AGTCTGAAGATCACGAGAGGAAGGTGTTGGAAGCGGAGGCCCATGTGAACGC---CC 1107
* *** * * ** * ** *** * * ** *** * *
consensus_7839#0 TACTAAGCTACTAACTTGCTAGTAGTAGCAAGTTTGTGTTGACTCGAACCAATAAATACT 1138
consensus_7839#1 TACAGAAGCA-----------GTCGGAGGAGCTTCTCCTGGAGTACGACAGGTTGCTGGA 1156
*** * * ** * ** * ** * ** * ** * *
consensus_7839#0 ACCCATCTTGCGTCTAAATTTGATTAGTCATGTCAGCAGCCAGTAGAAGCTCCTGTTCTG 1198
consensus_7839#1 AGACAACCAGATTCTACAATC--TCAGCTTCACTACAAA--GGCTGAAACAGTTAACCTG 1212
* ** * * **** * * * ** * * * *** * * ***
consensus_7839#0 TGCTTAGCTAGG-AAACCTCCTGCTGCTAAAATGAAAATGATGTCTAGTACTCTAGTTTG 1257
consensus_7839#1 GGGCATGCAACTCAAAGTGCTCGTTACCAAGACT-------CGTAGACTTACCAAATGTC 1265
* ** * *** * * * * ** * ** * * * * * *
consensus_7839#0 AGTAAGGAGTGTCCTAAAGGCTAAAGGGAAGATTTATTTTCCTCATATTTGAACTCATTG 1317
consensus_7839#1 AGTGCAGAGCGAAGGTATTGGTGAATGTGATGCTTGGAATCCT--TGCTCTAACTTGTGG 1323
*** *** * * * * ** * * ** **** * * **** * *
consensus_7839#0 TGTGGTGTGTGGTGTGTGTGTGTGTGC---TGTATCTTCAAGT--TGAAAACACTGTTTC 1372
consensus_7839#1 TGTTGGGT-TGATGTACTAGTGTGTGCATTTGTAGTTTTGAGGAGTATAAAAGCCAGGGA 1382
*** * ** ** *** ******** **** ** ** * *** *
consensus_7839#0 AAAAAAAAGAGAGAATAGATCCAAGGCACACACCACCAAATGCCATGACTTATTTCTCGA 1432
consensus_7839#1 TGATATATGGTGAAATGGTTATGAATCTGGTATCAGTTCATGTCGCCATGCAGGGTT--G 1440
* * * * *** * * * * * ** *** * * * *
consensus_7839#0 TTTTTATGAAAAATAAGAAAATGAATGTTGTGTATTCCAAATCTACATCTCAGTGAAGCA 1492
consensus_7839#1 TTGATCTGAAAACTG---AATTGAAC-TTGTGGGCTGCGG--CCATGCCTCTATTCAGGC 1494
** * ****** * ** **** ***** * * * * *** * **
consensus_7839#0 TATGAGCACTAAGTTTCAATAGCTCCAGTTAGCAAGAAACCAATATGGAATGTAAAGGCT 1552
consensus_7839#1 CTTGATCTGAAAATCTGAAAAGG-------AGGAAAGTTTCCTACTGAAATG--AATGCT 1545
*** * ** * * ** ** ** ** * ** **** ** ***
consensus_7839#0 ATGAAGCTGTAAACCACTAAAAAGATCTGTCGACTATGGAATTGAAACATAGGTCTCAAC 1612
consensus_7839#1 ------CTGTTAGCT-TTGCTAAAACCGGGCTAGGATGGA-TCGTTTTATTTGTGTGAAT 1597
**** * * * ** * * * * * ***** * * ** ** * **
consensus_7839#0 ATGCACAAGTTCAGAACTTCAGATCACAATATGAACTCATCAGTTCTGTACTTTGGCAGT 1672
consensus_7839#1 AACTTAGAATATA----TTCTGG------------------------------------- 1616
* * * * *** *
consensus_7839#0 TTTTTAGAAAAAAATGATAAGCTTTTTTAGGTCTATTCTTATACACCTAGTCATTCAGGA 1732
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 ACACAAATTTTCAGATGCAGGAATTATATGCTTTACAAAGCTAACAGTCCGTGCGACAAA 1792
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TTTGTATGTTGCTTGTCCTAGTGTTTGTACTTTAGTCTTAGGGAGTCTTAGAATTGATGC 1852
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 ACTTTTTTTACTGTTTATTCAATGTCCAAAGTTCCAAATATTACGACTGCGAAATTCCAC 1912
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TCCCCTGACTTGGACTAAGAACTTAGGTCATGAAATAAACTAGGGTGCTAGGCTATTCAA 1972
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 ATTGGTCTGTCACTGTGTCCATTTTGATAACTGGTATGCCATACAATCGAACTGATGACA 2032
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 AACATCCTTACAGGTTCATAGAGAAATGGAAAAAATGACATCAGTGAGCAAATAAATTGA 2092
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 ACTTTGTGAAAGTGAACATCTTAGTAATGGTTTGAAGGTTTGTTTGGATAATACTTATGA 2152
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 ATATTGTAGTAAGCAGTGATTATTCATGTTTCTTCTTGGTGGCTCTGCGATTCACACGAT 2212
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TGCTTAGGTATGCATTGTTGCAGTACATTTAGGATTTTCATACAAGGAATTTAGAGAACA 2272
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 AGGCATTGAAGTTAACTTTGTAAAGAGTTAAACTTAAAATGCCTGCACTAAAATTTAGAG 2332
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 AACAAGGCATTGAAGTTAACTTTGTAAAGAGTTAAACTTAAAATGCCTGCACTAAAATAA 2392
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 ACAAGGATGGTAGTTGATATTTCCCATTGATATAGGGTCTTTACTCTTTAGTTGTACTGG 2452
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TTGAATCATGAATAGCTTTGACGCTCTTTTGAATACCAAAATGTACAAATCTCAAAGCAG 2512
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TACTGTTATGTAAAACTGCATTGTTGGCTGGGTGCCTAACAGCAGGGGCTGGGAGTGCAA 2572
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TCCATTTCCATTATCTAAAATAAATGCAAAACCGTATTATTCTTTGAAATGTTTTTTATA 2632
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TATATTATGTATAATGCTATATACCGGAGTTGGTGCAATTTTGTTCTAACCGTATAATTT 2692
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 AGAGTCACTCAAGAAAATCCTCTTTCAACTTAAGATTCAAATTATAGAACCAGATCAAAA 2752
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TATCATGTCTACATAGAGTTTGTCAAGGAAGTCCTTTTATTGTAGGGATAAGCTTTATAT 2812
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 AGTCTGATTCCATTGGTAAACTGCGGTGGGTACCTGGTGCCTGAGAAATAATCCTTGCTG 2872
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 ATAAGACATCAATTTATTTTCTTTGTTCAACTAGACATATAATAATGACTTTGAGTGTGT 2932
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 GAGCAGCTTGGTAACCAGTTCAATTCAAAATTTGCATTTAAATTTGAGCAGATTAGAAGC 2992
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 CCTGAAGGCCTGAACCAATCATTTATATTAACTTCGAACTTATGTGCCTTCAATTGTATC 3052
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TGTCGATGTAGTGGGGCTTTTCCCCTGGGAAATCGCATGAAGTAATGTGGATTGGAGAAA 3112
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TAATGCTGGATATGATTAAATAGATATTGAGATATAATGGCATTCCCCATGAGGAAGCGT 3172
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TCCATTCTGTTACTAAGCTATATACTCTGATCCCTTAAAATTGATAAAAGTACAAATATT 3232
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 AGTAGTCTGTGTGATATTCACTGTGTCGCACTTATAAAGAAGTAATGATAATACTGTGTG 3292
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TGGTAGACATGTTGCTTATCTACAGGCGAGTTTTTTGACCTTCCTTTTGTACTCAAAATT 3352
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TATTCTATAGACTGGAAAGGAAAGACAAACAAGGAGACTAGGATCATTTCTAGTGTATAG 3412
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 ACTTTAGATTTGTCTGGAACAAATCAGGAAACCAGAATAACTGTCTGGGTAGAAGGATCC 3472
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TTTAACCCTGCTGCACATATTTGTAGGCCATTTGATTTGATACAAGTGAATTTGATGGTT 3532
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TACTTGATGTTCCAGGGTACATACTATTCCTTGCATTTGTCATTGATCGGTTACACCACT 3592
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 ACCACCGGAAGCTGACTATACTGAAGAAAACCGCAAACACCTCCAGGGAGGAGGTTGAGA 3652
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 AACTACAAATTGAGCTCCAAGGCAAGGAAGATAAATCCAAGGAAGTCAAGAAGCTTCGTG 3712
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 CGGAATTAGCCAGCCTTAGTGAAAAGATGAAGAAGCTAAAATCAGAATCGGAGGAGCATG 3772
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 AAAGGCAGAGATTGGAGGCCGAAGCACATGTCAATGCCCTACAGAAGCAATCTGAGGAGC 3832
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TCCTGCTTGAATATGACCGGTTATTGGAAGATAACCAGATATTACAGACACAGGTTCTTT 3892
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 CTCTCAGAAGCTGAGTCTGCAAATGTACAACTTGTGTGATGGCCATACTCTTACAAAAGG 3952
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 GGGATTGGATTGCTATGATTTTATTTACTAGCTCAGATCTCTGTAAGATATCATTTGTCA 4012
consensus_7839#1 ------------------------------------------------------------
consensus_7839#0 TGTCTTTGTTGCTCCATGTTCTTTTTGTGACAGCTTAAAAA 4053
consensus_7839#1 -----------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||