cluster # 7840

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Oryza sativa
cluster # 7840 cluster # 7840 Sequences # 5 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7840#0 length = 1745 sequences # 3

consensus_7840#1 length = 436 sequences # 1
consensus_7840#2 length = 313 sequences # 1

consensusID : consensus_7840#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1745
fasta sequence

                              [TGTCCTTTTACAAGTGGTGATGAAAAGGATAAGCGTTGAAGATGAAAATGAGTCTACTCTTTTGTTTCAGCTTCTGGGCACAATAATCGAGTCTGGCCAAGAAAAAGTTATGCCTCACATTCCTGAAATTGTATCTAACATAGCCAATACCATAATGAAGCTATTGCCCCCTGTGCCAGATCCCTGGCCTCAGGCTGTTGAACGG-GGTTTTGCTGCACTGGTATCGATGGCTCAAGCTTGGGAAAGCTCTGCACCAGATGAAAACAAGGACATTGAAATGAGGGTCTGGCAGTCAGGCCAGTTTGCTATGGCCCAAACATTTTCGCATGTGTTACAAAA-GGCTTGGTTGCTACCAGTTGAGCAAAT-GGGGTTATCTGTTTGCTCTTCATTGCCACCTCTGTCGTGTGTAAATGATGCTTCTATTTTACTTGAGTTCATTATGAGGTCTATCACCTCTATGGAAGAAACTGCAAGTATGAAGGTGTTTGAGCTAGTAGCTATATGGGCTGACATAATTGCTTGTTGGGATTCTTGGGAGGAAATGGAGGATCAGGGAATTTTCAATACAATCAAAGAAGCTGTTAACTTCCATCAAAACTTTGATTCTAATGGTTTCTTCCTGAAAATACTCCCTTCCCGATCTGAAAATAGTTCACAAAGTTCAGTCATAAGTTGGGTTTCTAGTTTTATAACCAGGGCCATTGAAGCTTACCCATCTGCAACATGGAGGGCATGTTCATGCATGCATACACTGCTGCACACTCCTAATTTCTCTCATGGAGCAGAAGATACTAGAATGACTCTTGCTGTATCCTTTGCGCAAGCAGCATTCTCCCGTTTCAAGTCTGTATCTGACAGCCCTTCTGGGATATGGAAACCACTAATACTAGTCATTTCGTCATGCTACATATGCTACCCTGATGCTATTGAGCAAGTCTTACGCAAATATGACAGTAACGGTTATGCGATATGGGCATCTGCATTAGCACAAATCTCAAGTAGCTCTTTCAATCCTGGCTTGTCATCTGAATCCGAGATCAAACTAGCTGTGTTAACGTTAGCAACTGTGATTGAGCATCTTTTGGCCCTTTCTATGGGTGGCACCAAACTATTGCATGATTGCTGTGTATCATTGATGGAGTCTTGCATCCATCTGAAGGAAGTTCAAGAGGATGGGGATGATGGTGATGGTGCAGAAGATCTTGATGATGATGATGATGATGAAGAGGAGGAAGACACCGATGAAGATGATGAGGATTATAATCAGGATTCGGATGATGATGATGTACGAGAAGAGACAGAAGAGGAATTTCTTCAAAGATATGCAGCGGCTGCCGGTGGTGAATCAATTGAAATTGTTGAGGACGGTGACATTGATGATGAAACCCAAGACATTGAATTGGGTTCCCTGGATGAAATGGATGTACAGCAGGTGGTTCTTTCGATGATGAAGATTCGTCCTGATCTCATTCGCGCTCAAACATTTCCGGATGGCCTAATGGAGAGAATGGCAGAAACGTTTCCTGAATATGAACAGCTGTTCCATGTTCATCGGCAAGCCTAGGCGATACCACAATAGACTTGTGTGCAGCCTTGTTATTTATTGTTTCTAGTTTCTTTTTTTTTTAAACTTGTCCGTGTGTTTATATATTTGTATGGAATGGTGGGCCGATTATTGTTGATGGTTGTGGCGATTATTTTGTGATTTGGATCGGACTAATCTGCCGGACATGATGTTTTAAGGA]

[+] EMBL AK101888             [TGTCCTTTTACAAGTGGTGATGAAAAGGATAAGCGTTGAAGATGAAAATGAGTCTACTCTTTTGTTTCAGCTTCTGGGCACAATAATCGAGTCTGGCCAAGAAAAAGTTATGCCTCACATTCCTGAAATTGTATCTAACATAGCCAATACCATAATGAAGCTATTGCCCCCTGTGCCAGATCCCTGGCCTCAGGCTGTTGAACGG GGTTTTGCTGCACTGGTATCGATGGCTCAAGCTTGGGAAAGCTCTGCACCAGATGAAAACAAGGACATTGAAATGAGGGTCTGGCAGTCAGGCCAGTTTGCTATGGCCCAAACATTTTCGCATGTGTTACAAAA GGCTTGGTTGCTACCAGTTGAGCAAAT GGGGTTATCTGTTTGCTCTTCATTGCCACCTCTGTCGTGTGTAAATGATGCTTCTATTTTACTTGAGTTCATTATGAGGTCTATCACCTCTATGGAAGAAACTGCAAGTATGAAGGTGTTTGAGCTAGTAGCTATATGGGCTGACATAATTGCTTGTTGGGATTCTTGGGAGGAAATGGAGGATCAGGGAATTTTCAATACAATCAAAGAAGCTGTTAACTTCCATCAAAACTTTGATTCTAATGGTTTCTTCCTGAAAATACTCCCTTCCCGATCTGAAAATAGTTCACAAAGTTCAGTCATAAGTTGGGTTTCTAGTTTTATAACCAGGGCCATTGAAGCTTACCCATCTGCAACATGGAGGGCATGTTCATGCATGCATACACTGCTGCACACTCCTAATTTCTCTCATGGAGCAGAAGATACTAGAATGACTCTTGCTGTATCCTTTGCGCAAGCAGCATTCTCCCGTTTCAAGTCTGTATCTGACAGCCCTTCTGGGATATGGAAACCACTAATACTAGTCATTTCGTCATGCTACATATGCTACCCTGATGCTATTGAGCAAGTCTTACGCAAATATGACAGTAACGGTTATGCGATATGGGCATCTGCATTAGCACAAATCTCAAGTAGCTCTTTCAATCCTGGCTTGTCATCTGAATCCGAGATCAAACTAGCTGTGTTAACGTTAGCAACTGTGATTGAGCATCTTTTGGCCCTTTCTATGGGTGGCACCAAACTATTGCATGATTGCTGTGTATCATTGATGGAGTCTTGCATCCATCTGAAGGAAGTTCAAGAGGATGGGGATGATGGTGATGGTGCAGAAGATCTTGATGATGATGATGATGATGAAGAGGAGGAAGACACCGATGAAGATGATGAGGATTATAATCAGGATTCGGATGATGATGATGTACGAGAAGAGACAGAAGAGGAATTTCTTCAAAGATATGCAGCGGCTGCCGGTGGTGAATCAATTGAAATTGTTGAGGACGGTGACATTGATGATGAAACCCAAGACATTGAATTGGGTTCCCTGGATGAAATGGATGTACAGCAGGTGGTTCTTTCGATGATGAAGATTCGTCCTGATCTCATTCGCGCTCAAACATTTCCGGATGGCCTAATGGAGAGAATGGCAGAAACGTTTCCTGAATATGAACAGCTGTTCCATGTTCATCGGCAAGCCTAGGCGATACCACAATAGACTTGTGTGCAGCCTTGTTATTTATTGTTTCTAGTTTCTTTTTTTTTTAAACTTGTCCGTGTGTTTATATATTTGTATGGAATGGTGGGCCGATTATTGTTGATGGTTGTGGCGATTATTTTGTGATTTGGATCGGACTAATCTGCCGGACATGATGTTTTAAGGA]
[+] EMBL CF323181             [TGTCCTTTTACAAGTGGTGATGAAAAGGATAAGCGTTGAAGATGAAAATGAGTCTACTCTTTTGTTTCAGCTTCTGGGCACAATAATCGAGTCTGGCCAAGAAAAAGTTTTGCCTCACATTCCTGAAATTGTATCTAACATAGCCAATACCATAATGAAGCTATTGCCCCCTGTGCCAGATCCCTGGCCTCAGGCTGTTGAACGGNGGTTTTGCTGCACTGGTATCGATGGCTCAAGCTTGGGAAAGCTCTGCACCAGATGAAAACAAGGACATTGAAATGAGGGTCTGGCAGTCAGGCCAGTTTGCTATCGCCCAAACATTTTCGCATGTGTTACAAAAGGGCTTGGTTGCTTCCAGTTGAGCAAATGGGGGTTATCTGTTTGCTCTTCATTGCCACCTCTGTCATGTGTAAATGATGCTTCTATTTTACTTGAGTTCATTATGAGGTCTATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AA751431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCCCGTTTCAAGTCTGTATCTGACAGCCCTTCTGGGATATGGAAACCACTAATACTAGTCATTTCGTCATGCTACATATGCTACCCTGATGCTATTGAGCAACTCTTACGCAAATATGACAGTAACGGTTATGCGATGTGGGCATCTGCATTAGCACAAATCTCAAGTAGCTCTTTCAATCCTGGCTTGTCA CTGAATCCGAGAca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]




>consensus_7840#0
TGTCCTTTTACAAGTGGTGATGAAAAGGATAAGCGTTGAAGATGAAAATGAGTCTACTCT
TTTGTTTCAGCTTCTGGGCACAATAATCGAGTCTGGCCAAGAAAAAGTTATGCCTCACAT
TCCTGAAATTGTATCTAACATAGCCAATACCATAATGAAGCTATTGCCCCCTGTGCCAGA
TCCCTGGCCTCAGGCTGTTGAACGGGGTTTTGCTGCACTGGTATCGATGGCTCAAGCTTG
GGAAAGCTCTGCACCAGATGAAAACAAGGACATTGAAATGAGGGTCTGGCAGTCAGGCCA
GTTTGCTATGGCCCAAACATTTTCGCATGTGTTACAAAAGGCTTGGTTGCTACCAGTTGA
GCAAATGGGGTTATCTGTTTGCTCTTCATTGCCACCTCTGTCGTGTGTAAATGATGCTTC
TATTTTACTTGAGTTCATTATGAGGTCTATCACCTCTATGGAAGAAACTGCAAGTATGAA
GGTGTTTGAGCTAGTAGCTATATGGGCTGACATAATTGCTTGTTGGGATTCTTGGGAGGA
AATGGAGGATCAGGGAATTTTCAATACAATCAAAGAAGCTGTTAACTTCCATCAAAACTT
TGATTCTAATGGTTTCTTCCTGAAAATACTCCCTTCCCGATCTGAAAATAGTTCACAAAG
TTCAGTCATAAGTTGGGTTTCTAGTTTTATAACCAGGGCCATTGAAGCTTACCCATCTGC
AACATGGAGGGCATGTTCATGCATGCATACACTGCTGCACACTCCTAATTTCTCTCATGG
AGCAGAAGATACTAGAATGACTCTTGCTGTATCCTTTGCGCAAGCAGCATTCTCCCGTTT
CAAGTCTGTATCTGACAGCCCTTCTGGGATATGGAAACCACTAATACTAGTCATTTCGTC
ATGCTACATATGCTACCCTGATGCTATTGAGCAAGTCTTACGCAAATATGACAGTAACGG
TTATGCGATATGGGCATCTGCATTAGCACAAATCTCAAGTAGCTCTTTCAATCCTGGCTT
GTCATCTGAATCCGAGATCAAACTAGCTGTGTTAACGTTAGCAACTGTGATTGAGCATCT
TTTGGCCCTTTCTATGGGTGGCACCAAACTATTGCATGATTGCTGTGTATCATTGATGGA
GTCTTGCATCCATCTGAAGGAAGTTCAAGAGGATGGGGATGATGGTGATGGTGCAGAAGA
TCTTGATGATGATGATGATGATGAAGAGGAGGAAGACACCGATGAAGATGATGAGGATTA
TAATCAGGATTCGGATGATGATGATGTACGAGAAGAGACAGAAGAGGAATTTCTTCAAAG
ATATGCAGCGGCTGCCGGTGGTGAATCAATTGAAATTGTTGAGGACGGTGACATTGATGA
TGAAACCCAAGACATTGAATTGGGTTCCCTGGATGAAATGGATGTACAGCAGGTGGTTCT
TTCGATGATGAAGATTCGTCCTGATCTCATTCGCGCTCAAACATTTCCGGATGGCCTAAT
GGAGAGAATGGCAGAAACGTTTCCTGAATATGAACAGCTGTTCCATGTTCATCGGCAAGC
CTAGGCGATACCACAATAGACTTGTGTGCAGCCTTGTTATTTATTGTTTCTAGTTTCTTT
TTTTTTTAAACTTGTCCGTGTGTTTATATATTTGTATGGAATGGTGGGCCGATTATTGTT
GATGGTTGTGGCGATTATTTTGTGATTTGGATCGGACTAATCTGCCGGACATGATGTTTT
AAGGA

consensusID : consensus_7840#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 436
fasta sequence

                              [GCATCTGCATTAGCACAAATCTCAAGTAGCTCTTTCAATCCTGGCTTGTCATCTGAATCCGAGATCAAACTAGCTGTGTTAACGTTAGCAACTGTGATTGAGCATCTTTTGGCCCTTTCTATGGGTGGCACCAAACTATTGCATGATTGCTGTGTATCATTGATGGAGTCTTGCATCCATCTGAAGGAAGTTCAAGAGGATGGGGATGATGGTGATGGTGCAGAAGATCTTGATGATGATGATGATGATGAAGAGGAGGAAGACACCGATGAAGATGATGAGGATTCGGATGATGATGATGTACGAGAAGAGACAGAAGAGGATTCCTTCAAGATATGCACGGCTGCCGGTGGGTGATCCATTGAATTGTGAAGGCCGGTGACATTGATGATGAACCCAGCATTGATTGGGGNCCCGGANTGAATGGGTTTACCNG]

[+] EMBL AU091375             [GCATCTGCATTAGCACAAATCTCAAGTAGCTCTTTCAATCCTGGCTTGTCATCTGAATCCGAGATCAAACTAGCTGTGTTAACGTTAGCAACTGTGATTGAGCATCTTTTGGCCCTTTCTATGGGTGGCACCAAACTATTGCATGATTGCTGTGTATCATTGATGGAGTCTTGCATCCATCTGAAGGAAGTTCAAGAGGATGGGGATGATGGTGATGGTGCAGAAGATCTTGATGATGATGATGATGATGAAGAGGAGGAAGACACCGATGAAGATGATGAGGATTCGGATGATGATGATGTACGAGAAGAGACAGAAGAGGATTCCTTCAAGATATGCACGGCTGCCGGTGGGTGATCCATTGAATTGTGAAGGCCGGTGACATTGATGATGAACCCAGCATTGATTGGGGNCCCGGANTGAATGGGTTTACCNG]




>consensus_7840#1
GCATCTGCATTAGCACAAATCTCAAGTAGCTCTTTCAATCCTGGCTTGTCATCTGAATCC
GAGATCAAACTAGCTGTGTTAACGTTAGCAACTGTGATTGAGCATCTTTTGGCCCTTTCT
ATGGGTGGCACCAAACTATTGCATGATTGCTGTGTATCATTGATGGAGTCTTGCATCCAT
CTGAAGGAAGTTCAAGAGGATGGGGATGATGGTGATGGTGCAGAAGATCTTGATGATGAT
GATGATGATGAAGAGGAGGAAGACACCGATGAAGATGATGAGGATTCGGATGATGATGAT
GTACGAGAAGAGACAGAAGAGGATTCCTTCAAGATATGCACGGCTGCCGGTGGGTGATCC
ATTGAATTGTGAAGGCCGGTGACATTGATGATGAACCCAGCATTGATTGGGGNCCCGGAN
TGAATGGGTTTACCNG

consensusID : consensus_7840#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 313
fasta sequence

                              [TGGTTCTTTCGATGATGAAGATTCGTCCTGATCTCATTCGCGCTCAAACATTTCCGGATGGCCTAATGGAGAGAATGGCAGAAACGTTTCCTGAATATGAACAGCTGTTCCATGTTCATCGGCAAGCCTAGGCGATACCACAATAGACTAGTGTGCAGCCTTGTTATTTATTGTTTCTAGTTTCTTTTTTTTTTAAACTTGTCCGTGTGTTTATATATTTGTATGGAATGGTGGGCCGATTATTGTTGATGGTTGTGGCGATTATTTTGTNNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU058271             [TGGTTCTTTCGATGATGAAGATTCGTCCTGATCTCATTCGCGCTCAAACATTTCCGGATGGCCTAATGGAGAGAATGGCAGAAACGTTTCCTGAATATGAACAGCTGTTCCATGTTCATCGGCAAGCCTAGGCGATACCACAATAGACTAGTGTGCAGCCTTGTTATTTATTGTTTCTAGTTTCTTTTTTTTTTAAACTTGTCCGTGTGTTTATATATTTGTATGGAATGGTGGGCCGATTATTGTTGATGGTTGTGGCGATTATTTTGTNNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_7840#2
TGGTTCTTTCGATGATGAAGATTCGTCCTGATCTCATTCGCGCTCAAACATTTCCGGATG
GCCTAATGGAGAGAATGGCAGAAACGTTTCCTGAATATGAACAGCTGTTCCATGTTCATC
GGCAAGCCTAGGCGATACCACAATAGACTAGTGTGCAGCCTTGTTATTTATTGTTTCTAG
TTTCTTTTTTTTTTAAACTTGTCCGTGTGTTTATATATTTGTATGGAATGGTGGGCCGAT
TATTGTTGATGGTTGTGGCGATTATTTTGTNNTTAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7840#0      TGTCCTTTTACAAGTGGTGATGAAAAGGATAAGCGTTGAAGATGAAAATGAGTCTACTCT 60
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      TTTGTTTCAGCTTCTGGGCACAATAATCGAGTCTGGCCAAGAAAAAGTTATGCCTCACAT 120
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      TCCTGAAATTGTATCTAACATAGCCAATACCATAATGAAGCTATTGCCCCCTGTGCCAGA 180
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      TCCCTGGCCTCAGGCTGTTGAACGGGGTTTTGCTGCACTGGTATCGATGGCTCAAGCTTG 240
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      GGAAAGCTCTGCACCAGATGAAAACAAGGACATTGAAATGAGGGTCTGGCAGTCAGGCCA 300
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      GTTTGCTATGGCCCAAACATTTTCGCATGTGTTACAAAAGGCTTGGTTGCTACCAGTTGA 360
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      GCAAATGGGGTTATCTGTTTGCTCTTCATTGCCACCTCTGTCGTGTGTAAATGATGCTTC 420
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      TATTTTACTTGAGTTCATTATGAGGTCTATCACCTCTATGGAAGAAACTGCAAGTATGAA 480
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      GGTGTTTGAGCTAGTAGCTATATGGGCTGACATAATTGCTTGTTGGGATTCTTGGGAGGA 540
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      AATGGAGGATCAGGGAATTTTCAATACAATCAAAGAAGCTGTTAACTTCCATCAAAACTT 600
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      TGATTCTAATGGTTTCTTCCTGAAAATACTCCCTTCCCGATCTGAAAATAGTTCACAAAG 660
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      TTCAGTCATAAGTTGGGTTTCTAGTTTTATAACCAGGGCCATTGAAGCTTACCCATCTGC 720
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      AACATGGAGGGCATGTTCATGCATGCATACACTGCTGCACACTCCTAATTTCTCTCATGG 780
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      AGCAGAAGATACTAGAATGACTCTTGCTGTATCCTTTGCGCAAGCAGCATTCTCCCGTTT 840
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      CAAGTCTGTATCTGACAGCCCTTCTGGGATATGGAAACCACTAATACTAGTCATTTCGTC 900
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      ATGCTACATATGCTACCCTGATGCTATTGAGCAAGTCTTACGCAAATATGACAGTAACGG 960
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      TTATGCGATATGGGCATCTGCATTAGCACAAATCTCAAGTA-GCTCTTTCAATCCTGGCT 1019
consensus_7840#1      -------------GCATCTGCATTAGCACAAATCTCAAGTA-GCTCTTTCAATCCTGGCT 46
consensus_7840#2      -TGGTTCTTTCGATGATGAAGATTCGTCCTGATCTCATTCGCGCTCAAACATTTCCGGAT 59
                                     **    *** *  *  ******     ****   ** * * ** *

consensus_7840#0      TGTCATCTGAATCCGAGATCAAACTAGCTGTGTTAACGTTAGCAACTGTGAT-TGAGCAT 1078
consensus_7840#1      TGTCATCTGAATCCGAGATCAAACTAGCTGTGTTAACGTTAGCAACTGTGAT-TGAGCAT 105
consensus_7840#2      GGCCTAATGGAGAGAATGGCAGAAACGTTTCCTGAATATGAACAGCTGTTCCATGTTCAT 119
                       * *   ** *    *   ** *   * *   * **  * * ** ****    **  ***

consensus_7840#0      CTTTTGGCCCTTTCTATGGGTGGCACCAAACTATTGCATGA--TTGCTGTGTATCATTGA 1136
consensus_7840#1      CTTTTGGCCCTTTCTATGGGTGGCACCAAACTATTGCATGA--TTGCTGTGTATCATTGA 163
consensus_7840#2      CGGCAAGCCTAGGCGATA--CCACAATAGACTAGTGTGCAGCCTTGTTATTTATTGTTTC 177
                      *     ***    * **      **  * **** **       *** * * ***  **  

consensus_7840#0      TGGAGTCTTGCATCCATCTGAAGGAAGTTCAAGAGGATGGGGATGATGGTG--ATGGTGC 1194
consensus_7840#1      TGGAGTCTTGCATCCATCTGAAGGAAGTTCAAGAGGATGGGGATGATGGTG--ATGGTGC 221
consensus_7840#2      TAGTTTCTT---TTTTTTTTAAACTTGTCCGTGTGTTTATATATTTGTATGGAATGGTGG 234
                      * *  ****   *   * * **    ** *  * *  *    **     **  ****** 

consensus_7840#0      AGAAGATCTTGATGATGATGATGATGATGAAGAGGAGGAAGACACCGATGAAGATGATGA 1254
consensus_7840#1      AGAAGATCTTGATGATGATGATGATGATGAAGAGGAGGAAGACACCGATGAAGATGATGA 281
consensus_7840#2      GCCGATTATTGTTGATGGTTGTGGCGATTATTTTGTNNTTAAAAAAAAAAAAAAAAAAAA 294
                            * *** ***** *  **  *** *    *      * *   *  ** *  *  *

consensus_7840#0      GGATTATAATCAGGATTCGGATGATGATGATGTACGAGAAGAGACAGAAGAGGAATTTCT 1314
consensus_7840#1      ------------GGATTCGGATGATGATGATGTACGAGAAGAGACAGAAGAGGA--TTCC 327
consensus_7840#2      A-----------AAAAAAAAAAAAAAAAAA------------------------------ 313
                                    *     *  *  *  *                              

consensus_7840#0      TCAAAGATATGCAGCGGCTGCCGGTGGTGAATCAATTGAAATTGTTGAGGACGGTGACAT 1374
consensus_7840#1      TTCAAGATATGCA-CGGCTGCCGGTGGGTGATCCATTGAA-TTGTGAAGGCCGGTGACAT 385
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      TGATGATGAAACCCAAGACATTGAATTGGGTTCCCTGGATGAAATGGATGTACAGCAGGT 1434
consensus_7840#1      TGATGATGAACCC---AGCATTGATTGGGG--NCCCGGANTGAATGGGTTTACCNG---- 436
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      GGTTCTTTCGATGATGAAGATTCGTCCTGATCTCATTCGCGCTCAAACATTTCCGGATGG 1494
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      CCTAATGGAGAGAATGGCAGAAACGTTTCCTGAATATGAACAGCTGTTCCATGTTCATCG 1554
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      GCAAGCCTAGGCGATACCACAATAGACTTGTGTGCAGCCTTGTTATTTATTGTTTCTAGT 1614
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      TTCTTTTTTTTTTAAACTTGTCCGTGTGTTTATATATTTGTATGGAATGGTGGGCCGATT 1674
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      ATTGTTGATGGTTGTGGCGATTATTTTGTGATTTGGATCGGACTAATCTGCCGGACATGA 1734
consensus_7840#1      ------------------------------------------------------------
consensus_7840#2      ------------------------------------------------------------
                                                                                  

consensus_7840#0      TGTTTTAAGGA 1745
consensus_7840#1      -----------
consensus_7840#2      -----------