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Oryza sativa
cluster # 7842 cluster # 7842       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7842#0 length = 1232 sequences # 2  
consensus_7842#1 length = 1221 sequences # 2  
consensus_7842#2 length = 607 sequences # 1  

consensusID : consensus_7842#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1232
fasta sequence
                              [TACGAGGTTCAAGTGGAGTGGTGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACCATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGACCAGCCCTTCGCCGTCGCGCTGCGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGCCAGCCTCTCCCGGCCTTCCTCGCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCCGTCGTCATGGGGGGCGGCTCAATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCCCTGCGCTGCGTCGTCAGCACGGCGGCCGGCGTCGACCACATCGACCTCGCCGAGTGCGCGCGCCGCGGCGTCGTCGTGGCCAACTCCGGGACGGTGTACTCCGGCGACGTGGCCGACCACGCCGTGGGCATGGTGATCGACGTGATGAGGCGCGTGTCGGCGGCGGAGAGGTACGTCCGGCGAGGGCTCTGGCCGGTGCAGGGGGACTATCCTCTCGGCTCCAAGGTAAGCGGCAAGCGTGTGGGCATCATCGGGCTTGGCAACATCGGTTCACTGATCGCCAAGAGGCTGGAAGCATTCGGCTGCGTCATCTCCTACAACTCAAGAAACCCCAAACGCTCGCTCCCCTACACCTACTACGCCGACGTCCGCGCCCTCGCCGCCGACTCCGACGTGCTCGTCGTGTCGTGCGCGCTCAACAGCGAGACGCGCCACATCGTCGGCGGCGAGGTGCTGGACGCGCTCGGCGAGGGCGGCGTGGTGGTGAACGTGGGGCGCGGCGCGAACGTGGACGAGGCGGCGCTGGTGAGGGCGCTGCGGGAGGGGAGGATCGCCGGCGCCGGGCTGGACGTGTTCGAGGGCGAGCCCAAGGTGTCGCCGGAGCTGAGGGAGATGGAGAACGTGGTGCTGACGCCCCACGTGGCGGTGTGGACGGCGGAGTCGAGGTCCGACCTACGTGACCACACGGTGGCCAACCTTGATGCCTTCTTCTCCGGCGACCCGCTGCTCACGCCGGTCATGCTTCCCTAACCCACCACCTACATACTCCACGTACAGAAGTGAACTCCGATAATACTCCAGTATATACAGTGATGGGTATATATATGTACAGTGTAACCCAAATAAGCGGCCCATCAGAGGTCCATTGGCCCAAAAGAGGCTTTATACTGTACTGGAATAAGTTCATCCGAGGTCCCTTAACTTTACACCGA]

[+] EMBL AK072049             [TACGAGGTTCAAGTGGAGTGGTGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACCATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGACCAGCCCTTCGCCGTCGCGCTGCGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGCCAGCCTCTCCCGGCCTTCCTCGCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCCGTCGTCATGGGGGGCGGCTCAATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCCCTGCGCTGCGTCGTCAGCACGGCGGCCGGCGTCGACCACATCGACCTCGCCGAGTGCGCGCGCCGCGGCGTCGTCGTGGCCAACTCCGGGACGGTGTACTCCGGCGACGTGGCCGACCACGCCGTGGGCATGGTGATCGACGTGATGAGGCGCGTGTCGGCGGCGGAGAGGTACGTCCGGCGAGGGCTCTGGCCGGTGCAGGGGGACTATCCTCTCGGCTCCAAGGTAAGCGGCAAGCGTGTGGGCATCATCGGGCTTGGCAACATCGGTTCACTGATCGCCAAGAGGCTGGAAGCATTCGGCTGCGTCATCTCCTACAACTCAAGAAACCCCAAACGCTCGCTCCCCTACACCTACTACGCCGACGTCCGCGCCCTCGCCGCCGACTCCGACGTGCTCGTCGTGTCGTGCGCGCTCAACAGCGAGACGCGCCACATCGTCGGCGGCGAGGTGCTGGACGCGCTCGGCGAGGGCGGCGTGGTGGTGAACGTGGGGCGCGGCGCGAACGTGGACGAGGCGGCGCTGGTGAGGGCGCTGCGGGAGGGGAGGATCGCCGGCGCCGGGCTGGACGTGTTCGAGGGCGAGCCCAAGGTGTCGCCGGAGCTGAGGGAGATGGAGAACGTGGTGCTGACGCCCCACGTGGCGGTGTGGACGGCGGAGTCGAGGTCCGACCTACGTGACCACACGGTGGCCAACCTTGATGCCTTCTTCTCCGGCGACCCGCTGCTCACGCCGGTCATGCTTCCCTAACCCACCACCTACATACTCCACGTACAGAAGTGAACTCCGATAATACTCCAGTATATACAGTGATGGGTATATATATGTACAGTGTAACCCAAATAAGCGGCCCATCAGAGGTCCATTGGCCCAAAAGAGGCTTTATACTGTACTGGAATAAGTTCATCCGAGGTCCCTTA            ]
[+] EMBL AK105953             [  CGAGGTTCAAGTGGAGTGGTGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACCATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGACCAGCCCTTCGCCGTCGCGCTGCGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGCCAGCCTCTCCCGGCCTTCCTCGCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCCGTCGTCATGGGGGGCGGCTCAATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCCCTGCGCTGCGTCGTCAGCACGGCGGCCGGCGTCGACCACATCGACCTCGCCGAGTGCGCGCGCCGCGGCGTCGTCGTGGCCAACTCCGGGACGGTGTACTCCGGCGACGTGGCCGACCACGCCGTGGGCATGGTGATCGACGTGATGAGGCGCGTGTCGGCGGCGGAGAGGTACGTCCGGCGAGGGCTCTGGCCGGTGCAGGGGGACTATCCTCTCGGCTCCAAGGTAAGCGGCAAGCGTGTGGGCATCATCGGGCTTGGCAACATCGGTTCACTGATCGCCAAGAGGCTGGAAGCATTCGGCTGCGTCATCTCCTACAACTCAAGAAACCCCAAACGCTCGCTCCCCTACACCTACTACGCCGACGTCCGCGCCCTCGCCGCCGACTCCGACGTGCTCGTCGTGTCGTGCGCGCTCAACAGCGAGACGCGCCACATCGTCGGCGGCGAGGTGCTGGACGCGCTCGGCGAGGGCGGCGTGGTGGTGAACGTGGGGCGCGGCGCGAACGTGGACGAGGCGGCGCTGGTGAGGGCGCTGCGGGAGGGGAGGATCGCCGGCGCCGGGCTGGACGTGTTCGAGGGCGAGCCCAAGGTGTCGCCGGAGCTGAGGGAGATGGAGAACGTGGTGCTGACGCCCCACGTGGCGGTGTGGACGGCGGAGTCGAGGTCCGACCTACGTGACCACACGGTGGCCAACCTTGACGCCTTCTTCTCCGGCGACCCGCTGCTCACGCCGGTCATGCTTCCCTAACCCACCACCTACATACTCCACGTACAGAAGTGAACTCCGATAATACTCCAGTATATACAGTGATGGGTATATATATGTACAGTGTAACCCAAATAAGCGGCCCATCAGAGGTCCATTGGCCCAAAAGAGGCTTTATACTGTACTGGAATAAGTTCATCCGAGGTCCCTTAACTTTACACCGA]


>consensus_7842#0 TACGAGGTTCAAGTGGAGTGGTGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACC ATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGAC CAGCCCTTCGCCGTCGCGCTGCGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGC CAGCCTCTCCCGGCCTTCCTCGCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCC GTCGTCATGGGGGGCGGCTCAATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCC CTGCGCTGCGTCGTCAGCACGGCGGCCGGCGTCGACCACATCGACCTCGCCGAGTGCGCG CGCCGCGGCGTCGTCGTGGCCAACTCCGGGACGGTGTACTCCGGCGACGTGGCCGACCAC GCCGTGGGCATGGTGATCGACGTGATGAGGCGCGTGTCGGCGGCGGAGAGGTACGTCCGG CGAGGGCTCTGGCCGGTGCAGGGGGACTATCCTCTCGGCTCCAAGGTAAGCGGCAAGCGT GTGGGCATCATCGGGCTTGGCAACATCGGTTCACTGATCGCCAAGAGGCTGGAAGCATTC GGCTGCGTCATCTCCTACAACTCAAGAAACCCCAAACGCTCGCTCCCCTACACCTACTAC GCCGACGTCCGCGCCCTCGCCGCCGACTCCGACGTGCTCGTCGTGTCGTGCGCGCTCAAC AGCGAGACGCGCCACATCGTCGGCGGCGAGGTGCTGGACGCGCTCGGCGAGGGCGGCGTG GTGGTGAACGTGGGGCGCGGCGCGAACGTGGACGAGGCGGCGCTGGTGAGGGCGCTGCGG GAGGGGAGGATCGCCGGCGCCGGGCTGGACGTGTTCGAGGGCGAGCCCAAGGTGTCGCCG GAGCTGAGGGAGATGGAGAACGTGGTGCTGACGCCCCACGTGGCGGTGTGGACGGCGGAG TCGAGGTCCGACCTACGTGACCACACGGTGGCCAACCTTGATGCCTTCTTCTCCGGCGAC CCGCTGCTCACGCCGGTCATGCTTCCCTAACCCACCACCTACATACTCCACGTACAGAAG TGAACTCCGATAATACTCCAGTATATACAGTGATGGGTATATATATGTACAGTGTAACCC AAATAAGCGGCCCATCAGAGGTCCATTGGCCCAAAAGAGGCTTTATACTGTACTGGAATA AGTTCATCCGAGGTCCCTTAACTTTACACCGA



consensusID : consensus_7842#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1221
fasta sequence
                              [TACGAGGTTCAAGTGGAGTGGTGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACCATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGACCAGCCCTTCGCCGTCGCGCTGCGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGCCAGCCTCTCCCGGCCTTCCTCGCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCCGTCGTCATGGGGGGCGGCTCAATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCCCTGCGCTGCGTCGTCAGCACGGCGGCCGGCGTCGACCACATCGACCTCGCCGAGTGCGCGCGCCGCGGCGTCGTCGTGGCCAACTCCGGGACGGTGTACTCCGGCGACGTGGCCGACCACGCCGTGGGCATGGTGATCGACGTGATGAGGCGCGTGTCGGCGGCGGAGAGGTACGTCCGGCGAGGGCTCTGGCCGGTGCAGGGGGACTATCCTCTCGGCTCCAAGGTAAGCGGCAAGCGTGTGGGCATCATCGGGCTTGGCAACATCGGTTCACTGATCGCCAAGAGGCTGGAAGCATTCGGCTGCGTCATCTCCTACAACTCAAGAAACCCCAAACGCTCGCTCCCCTACACCTACTACGCCGACGTCCGCGCCCTCGCCGCCGACTCCGACGTGCTCGTCGTGTCGTGCGCGCTCAACAGCGAGACGCGCCACATCGTCGGCGGCGAGGTGCTGGACGCGCTCGGCGAGGGCGGCGTGGTGGTGAACGTGGGGCGCGGCGCGAACGTGGACGAGGCGGCGCTGGTGAGGGCGCTGCGGGAGGGGAGGATCGCCGGCGCCGGGCTGGACGTGTTCGAGGGCGAGCCCAAGGTGTCGCCGGAGCTGAGGGAGATGGAGAACGTGGTGCTGACGCCCCACGTGGCGGTGTGGACGGCGGAGTCGAGGTCCGACCTACGTGACCACACGGTGGCCAACCTTGACGCCTTCTTCTCCGGCGACCCGCTGCTCACGCCGGTCATGCTTCCCTAACCCACCACCTACATACTCCACGTACAGGTAATTTCTATTGTTGCTATTCGTCTGGTTTCATTCCATTTTTTGAGTAAATTTCATGTACTTATCAATAGCGTGGTTCCGTGAAACTTTAATACCAAATATATAAATATGTAGTCAAGTGTCAAAATATATATAGTTTTCTAC]

[+] EMBL AK068763             [TACGAGGTTCAAGTGGAGTGGTGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACCATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGACCAGCCCTTCGCCGTCGCGCTGCGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGCCAGCCTCTCCCGGCCTTCCTCGCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCCGTCGTCATGGGGGGCGGCTCAATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCCCTGCGCTGCGTCGTCAGCACGGCGGCCGGCGTCGACCACATCGACCTCGCCGAGTGCGCGCGCCGCGGCGTCGTCGTGGCCAACTCCGGGACGGTGTACTCCGGCGACGTGGCCGACCACGCCGTGGGCATGGTGATCGACGTGATGAGGCGCGTGTCGGCGGCGGAGAGGTACGTCCGGCGAGGGCTCTGGCCGGTGCAGGGGGACTATCCTCTCGGCTCCAAGGTAAGCGGCAAGCGTGTGGGCATCATCGGGCTTGGCAACATCGGTTCACTGATCGCCAAGAGGCTGGAAGCATTCGGCTGCGTCATCTCCTACAACTCAAGAAACCCCAAACGCTCGCTCCCCTACACCTACTACGCCGACGTCCGCGCCCTCGCCGCCGACTCCGACGTGCTCGTCGTGTCGTGCGCGCTCAACAGCGAGACGCGCCACATCGTCGGCGGCGAGGTGCTGGACGCGCTCGGCGAGGGCGGCGTGGTGGTGAACGTGGGGCGCGGCGCGAACGTGGACGAGGCGGCGCTGGTGAGGGCGCTGCGGGAGGGGAGGATCGCCGGCGCCGGGCTGGACGTGTTCGAGGGCGAGCCCAAGGTGTCGCCGGAGCTGAGGGAGATGGAGAACGTGGTGCTGACGCCCCACGTGGCGGTGTGGACGGCGGAGTCGAGGTCCGACCTACGTGACCACACGGTGGCCAACCTTGACGCCTTCTTCTCCGGCGACCCGCTGCTCACGCCGGTCATGCTTCCCTAACCCACCACCTACATACTCCACGTACAGGTAATTTCTATTGTTGCTATTCGTCTGGTTTCATTCCATTTTTTGAGTAAATTTCATGTACTTATCAATAGCGTGGTTCCGTGAAACTTTAATACCAAATATATAAATATGTAGTCAAGTGTCAAAATATATATAGTTTTCTAC]
[+] EMBL OSS14877A            [                                            CAAGTCTGTGTCAACCATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGACCAGCCCTTCGCCGTCGCGCTGCGCGAACGCTACCGCGTGCTCGACCTCCTCTCCTCCGGCCAGCCTCTCCCGGCCTTCCTNGNCGCCGNCGCCGCCGCGCCTGACCCGCCGCGCGCCGCCGTCGTCATGGGGGGCGGCTCAATCCGCGTCGACG GGCGATCTTCGACGNCGTGNCTTCCCTGCGCTGCGTCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]


>consensus_7842#1 TACGAGGTTCAAGTGGAGTGGTGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACC ATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGAC CAGCCCTTCGCCGTCGCGCTGCGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGC CAGCCTCTCCCGGCCTTCCTCGCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCC GTCGTCATGGGGGGCGGCTCAATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCC CTGCGCTGCGTCGTCAGCACGGCGGCCGGCGTCGACCACATCGACCTCGCCGAGTGCGCG CGCCGCGGCGTCGTCGTGGCCAACTCCGGGACGGTGTACTCCGGCGACGTGGCCGACCAC GCCGTGGGCATGGTGATCGACGTGATGAGGCGCGTGTCGGCGGCGGAGAGGTACGTCCGG CGAGGGCTCTGGCCGGTGCAGGGGGACTATCCTCTCGGCTCCAAGGTAAGCGGCAAGCGT GTGGGCATCATCGGGCTTGGCAACATCGGTTCACTGATCGCCAAGAGGCTGGAAGCATTC GGCTGCGTCATCTCCTACAACTCAAGAAACCCCAAACGCTCGCTCCCCTACACCTACTAC GCCGACGTCCGCGCCCTCGCCGCCGACTCCGACGTGCTCGTCGTGTCGTGCGCGCTCAAC AGCGAGACGCGCCACATCGTCGGCGGCGAGGTGCTGGACGCGCTCGGCGAGGGCGGCGTG GTGGTGAACGTGGGGCGCGGCGCGAACGTGGACGAGGCGGCGCTGGTGAGGGCGCTGCGG GAGGGGAGGATCGCCGGCGCCGGGCTGGACGTGTTCGAGGGCGAGCCCAAGGTGTCGCCG GAGCTGAGGGAGATGGAGAACGTGGTGCTGACGCCCCACGTGGCGGTGTGGACGGCGGAG TCGAGGTCCGACCTACGTGACCACACGGTGGCCAACCTTGACGCCTTCTTCTCCGGCGAC CCGCTGCTCACGCCGGTCATGCTTCCCTAACCCACCACCTACATACTCCACGTACAGGTA ATTTCTATTGTTGCTATTCGTCTGGTTTCATTCCATTTTTTGAGTAAATTTCATGTACTT ATCAATAGCGTGGTTCCGTGAAACTTTAATACCAAATATATAAATATGTAGTCAAGTGTC AAAATATATATAGTTTTCTAC



consensusID : consensus_7842#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 607
fasta sequence
                              [TGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACCATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGACCAGCCCTTCGCCGTCGCGCTGCGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGCCAGCCTCTCCCGGCCTTCCTCGCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCCGTCGTCATGGGGGGCGGCTCAATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCCCTGCGCTGCGTCGTCAGAACGGAGGCCGTCGTCGACCCATCGACCTCGCCGAGTGCGCGCGCCGCGACGTCCTCTTGTACAACTCCGAGACGGTGTACTCCGGTGACGTGGGCGACCACGCCGTGGCGTTGGACGATCCACCTGATCAACTCCGTGTCTCACGTGCAAAGCCCCCGCCGCCATGCCCCTTACCGTTGTAGCCCCACTATCCTCTCCTTTGCAAAACACTCGCACACTCTGCGGTCTTTCTCACCCCTCGTACACCCGCCTCCTTTACCCCACTATCTGTCACACCTCCCATGCCTCCTTCCCTCACCTCCAGAAACCC]

[+] EMBL CA754297             [TGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACCATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGACCAGCCCTTCGCCGTCGCGCTGCGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGCCAGCCTCTCCCGGCCTTCCTCGCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCCGTCGTCATGGGGGGCGGCTCAATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCCCTGCGCTGCGTCGTCAGAACGGAGGCCGTCGTCGACCCATCGACCTCGCCGAGTGCGCGCGCCGCGACGTCCTCTTGTACAACTCCGAGACGGTGTACTCCGGTGACGTGGGCGACCACGCCGTGGCGTTGGACGATCCACCTGATCAACTCCGTGTCTCACGTGCAAAGCCCCCGCCGCCATGCCCCTTACCGTTGTAGCCCCACTATCCTCTCCTTTGCAAAACACTCGCACACTCTGCGGTCTTTCTCACCCCTCGTACACCCGCCTCCTTTACCCCACTATCTGTCACACCTCCCATGCCTCCTTCCCTCACCTCCAGAAACCC]


>consensus_7842#2 TGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACCATGGCATCGCCCTCCGGCGCC GGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGACCAGCCCTTCGCCGTCGCGCTG CGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGCCAGCCTCTCCCGGCCTTCCTC GCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCCGTCGTCATGGGGGGCGGCTCA ATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCCCTGCGCTGCGTCGTCAGAACG GAGGCCGTCGTCGACCCATCGACCTCGCCGAGTGCGCGCGCCGCGACGTCCTCTTGTACA ACTCCGAGACGGTGTACTCCGGTGACGTGGGCGACCACGCCGTGGCGTTGGACGATCCAC CTGATCAACTCCGTGTCTCACGTGCAAAGCCCCCGCCGCCATGCCCCTTACCGTTGTAGC CCCACTATCCTCTCCTTTGCAAAACACTCGCACACTCTGCGGTCTTTCTCACCCCTCGTA CACCCGCCTCCTTTACCCCACTATCTGTCACACCTCCCATGCCTCCTTCCCTCACCTCCA GAAACCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7842#0      TACGAGGTTCAAGTGGAGTGGTGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACC 60
consensus_7842#1      TACGAGGTTCAAGTGGAGTGGTGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACC 60
consensus_7842#2      ---------------------TGTGGTGGAGGTGGAGCTGGTGGCAAGTCTGTGTCAACC 39
                                           ***************************************

consensus_7842#0      ATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGAC 120
consensus_7842#1      ATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGAC 120
consensus_7842#2      ATGGCATCGCCCTCCGGCGCCGGCAAGCCACCGGCCGTCCTCCTCCTCCGGCCGGTGGAC 99
                      ************************************************************

consensus_7842#0      CAGCCCTTCGCCGTCGCGCTGCGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGC 180
consensus_7842#1      CAGCCCTTCGCCGTCGCGCTGCGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGC 180
consensus_7842#2      CAGCCCTTCGCCGTCGCGCTGCGCGAGCGCTACCGCGTGCTCGACCTCCTCTCCTCCGGC 159
                      ************************************************************

consensus_7842#0      CAGCCTCTCCCGGCCTTCCTCGCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCC 240
consensus_7842#1      CAGCCTCTCCCGGCCTTCCTCGCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCC 240
consensus_7842#2      CAGCCTCTCCCGGCCTTCCTCGCCGCCGCCGCCGCCGCGCCTGACCCGCCGCGCGCCGCC 219
                      ************************************************************

consensus_7842#0      GTCGTCATGGGGGGCGGCTCAATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCC 300
consensus_7842#1      GTCGTCATGGGGGGCGGCTCAATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCC 300
consensus_7842#2      GTCGTCATGGGGGGCGGCTCAATCCGCGCCGACGCGGCGCTCTTCGACGCCGTGCCTTCC 279
                      ************************************************************

consensus_7842#0      CTGCGCTGCGTCGTCAGCACGGCGGCCGGCGTCGACCACATCGACCTCGCCGAGTGCGCG 360
consensus_7842#1      CTGCGCTGCGTCGTCAGCACGGCGGCCGGCGTCGACCACATCGACCTCGCCGAGTGCGCG 360
consensus_7842#2      CTGCGCTGCGTCGTCAGAACGGAGGCCGTCGTCGACC-CATCGACCTCGCCGAGTGCGCG 338
                      ***************** **** ***** ******** **********************

consensus_7842#0      CGCCGCGGCGTCGTCGTGGCCAACTCCGGGACGGTGTACTCCGGCGACGTGGCCGACCAC 420
consensus_7842#1      CGCCGCGGCGTCGTCGTGGCCAACTCCGGGACGGTGTACTCCGGCGACGTGGCCGACCAC 420
consensus_7842#2      CGCCGCGACGTCCTCTTGTACAACTCCGAGACGGTGTACTCCGGTGACGTGGGCGACCAC 398
                      ******* **** ** **  ******** *************** ******* *******

consensus_7842#0      GCCGTGGGCATGG-TGATCGACGTGATGAGGCGCGTGTCGGCGGCGGAGAGGTACGTCCG 479
consensus_7842#1      GCCGTGGGCATGG-TGATCGACGTGATGAGGCGCGTGTCGGCGGCGGAGAGGTACGTCCG 479
consensus_7842#2      GCCGTGGCGTTGGACGATCCACCTGATCAACTCCGTGTCTCACGTGCAAAGCCCCCGCCG 458
                      *******   ***  **** ** **** *    ******    * * * **   *  ***

consensus_7842#0      GCGAGGGCTCTGGCCGGTGCAGGGGGACTATCCTCTCGGCTCCAAGGTAAGCGGCAAGCG 539
consensus_7842#1      GCGAGGGCTCTGGCCGGTGCAGGGGGACTATCCTCTCGGCTCCAAGGTAAGCGGCAAGCG 539
consensus_7842#2      CC-ATGCCCCTTACCGTTGTAGCCCCACTATCCTCTCCTTTGCAAAACACTCGCACACTC 517
                       * * * * **  *** ** **    ***********   * ***   *  **   *   

consensus_7842#0      TGTGGGCATCATCGGGCTTGGCAACATCGGTTCACTGATCGCCAAGAGGCTGGAAGCATT 599
consensus_7842#1      TGTGGGCATCATCGGGCTTGGCAACATCGGTTCACTGATCGCCAAGAGGCTGGAAGCATT 599
consensus_7842#2      TGCGGTCTTTCTCACCCCTCGTACACCCGCCTCCTTTACCCC--ACTATCTGTCACACCT 575
                      ** ** * *  **   * * * *    **  **  * * * *  *    ***  *    *

consensus_7842#0      CGGCTGCGTCATCTCCTACAACTCAAGAAACCCCAAACGCTCGCTCCCCTACACCTACTA 659
consensus_7842#1      CGGCTGCGTCATCTCCTACAACTCAAGAAACCCCAAACGCTCGCTCCCCTACACCTACTA 659
consensus_7842#2      CCCATGCCTCCTTCCCT-CACCTCCAGAAACCC--------------------------- 607
                      *   *** ** *  *** ** *** ********                           

consensus_7842#0      CGCCGACGTCCGCGCCCTCGCCGCCGACTCCGACGTGCTCGTCGTGTCGTGCGCGCTCAA 719
consensus_7842#1      CGCCGACGTCCGCGCCCTCGCCGCCGACTCCGACGTGCTCGTCGTGTCGTGCGCGCTCAA 719
consensus_7842#2      ------------------------------------------------------------
                                                                                  

consensus_7842#0      CAGCGAGACGCGCCACATCGTCGGCGGCGAGGTGCTGGACGCGCTCGGCGAGGGCGGCGT 779
consensus_7842#1      CAGCGAGACGCGCCACATCGTCGGCGGCGAGGTGCTGGACGCGCTCGGCGAGGGCGGCGT 779
consensus_7842#2      ------------------------------------------------------------
                                                                                  

consensus_7842#0      GGTGGTGAACGTGGGGCGCGGCGCGAACGTGGACGAGGCGGCGCTGGTGAGGGCGCTGCG 839
consensus_7842#1      GGTGGTGAACGTGGGGCGCGGCGCGAACGTGGACGAGGCGGCGCTGGTGAGGGCGCTGCG 839
consensus_7842#2      ------------------------------------------------------------
                                                                                  

consensus_7842#0      GGAGGGGAGGATCGCCGGCGCCGGGCTGGACGTGTTCGAGGGCGAGCCCAAGGTGTCGCC 899
consensus_7842#1      GGAGGGGAGGATCGCCGGCGCCGGGCTGGACGTGTTCGAGGGCGAGCCCAAGGTGTCGCC 899
consensus_7842#2      ------------------------------------------------------------
                                                                                  

consensus_7842#0      GGAGCTGAGGGAGATGGAGAACGTGGTGCTGACGCCCCACGTGGCGGTGTGGACGGCGGA 959
consensus_7842#1      GGAGCTGAGGGAGATGGAGAACGTGGTGCTGACGCCCCACGTGGCGGTGTGGACGGCGGA 959
consensus_7842#2      ------------------------------------------------------------
                                                                                  

consensus_7842#0      GTCGAGGTCCGACCTACGTGACCACACGGTGGCCAACCTTGATGCCTTCTTCTCCGGCGA 1019
consensus_7842#1      GTCGAGGTCCGACCTACGTGACCACACGGTGGCCAACCTTGACGCCTTCTTCTCCGGCGA 1019
consensus_7842#2      ------------------------------------------------------------
                                                                                  

consensus_7842#0      CCCGCTGCTCACGCCGGTCATGCTTCCCTAACCCACCACCTACATACTCCACGTACAGAA 1079
consensus_7842#1      CCCGCTGCTCACGCCGGTCATGCTTCCCTAACCCACCACCTACATACTCCACGTACAG-- 1077
consensus_7842#2      ------------------------------------------------------------
                                                                                  

consensus_7842#0      GTGAACTCCGATAATACTCCAGTATATACAGTGATGGGTATATATATGTACAGTGTAACC 1139
consensus_7842#1      GTAATTTCTATTGTTGCT---ATTCGTCTGGTTTCAT---TCCATTTTTTGAGTAAATTT 1131
consensus_7842#2      ------------------------------------------------------------
                                                                                  

consensus_7842#0      CAAATAAGCGGCC-CATCAGAGGTCCATTGGCCCAAAAGAGGCTTTATACTGTACTGGAA 1198
consensus_7842#1      CATGTACTTATCAATAGCGTGGTTCCGTGAAACTTTAATACCAAATATATAAATATGTAG 1191
consensus_7842#2      ------------------------------------------------------------
                                                                                  

consensus_7842#0      TAAGTTCATCCGAGGTCCCTTAACTTTACACCGA 1232
consensus_7842#1      TCAAGT-GTCAAAATATATATAGTTTTCTAC--- 1221
consensus_7842#2      ----------------------------------
                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)