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Oryza sativa
cluster # 7872 cluster # 7872       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7872#0 length = 1340 sequences # 5  

consensusID : consensus_7872#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1340
fasta sequence
                              [CCAGCAGCGCCCTGCAGCTGCAAGCCTGCAACTAGTCGCTGGCCGGCCGGCCGGCCATGTACTACTGCCTCGCCGCGCCGCCGGCCGCTGCGGCACCGGCAGCGCCAGCGGCGAGGCGCGCGTCCTCTTTCCTCTTCGTGGTGTCGGTCCCTCCTCCGACTTTATGGGGGAGGGTGACGGGAGGCGCCGTGTCCGCCCAGCGGCTGGTGCGGCGGCGGTGCTCCTCCGCCGGCGAGCCCAGGGCGGCCGGCGACGGTGGCCTATCCAGTTTTTGCATAATTGAAGGCCCAGAGACTATACAAGACTTTGTTCAAATGCAATCACAAGAGATTCAAGACAACATCAGGAGCCGCCGTAACAAAATTTTCCTTTTGATGGAAGAGGTTAGACGATTGCGGGTGCAGCAGCGAATCAGAACTTCTGAAAGCAGAGGTGCAAGCAGTGAAGAAAGTGAAATGCCTGAAATCCCGTCTAGTATTCCCTTTTTGCCTAATACGTCACCGAAGACAATGAAACAACTCTATTTGACATCATTCTCATTCATAACTGGGATAATCTTTTTTGGAGGCTTGATAGCCCCAGTACTTGAGCTGAAATTAGGGCTAGGTGGTACATCTTATGAAGATTTTATAAGGACCATGCACTTGCCTCTTCAATTAAGTCAGGTAGATCCCATTGTGGCATCCTTTTCAGGTGGTGCAGTTGGTGTAATCTCGGCATTAATGTTGGTTGAAATTAGAAACGTCAGGCAGCAAGAGAAGAAAAGGTGTACATATTGCCATGGGACTGGATACTTGCCATGCGCTCGCTGTTCTGCAAGTGGAATGCTATTGAACAGCAAGAGTTTTTCACTTTCATGTGACAACGGCCATAATATGTGGTCTACAACCGAAAGGTGCCCCAATTGTTCAGGAGCTGGAAAGGTGATGTGCCCAACTTGCTTGTGCACAGGAACGGCAATGGCAAGCGAGCATGACCCACGGATAGACCCCTTCGATTAGTGATGAGCAATTGGAATCTGGAAGTGTGTATTCTAGCTGTACTGTTGGCTGCCCCCCCTTTTTGTTTGTGTTGCTGTGATAGGCCTGAATACCTGAAGAATGAAGTTCAGATCACACAACGAAAGCCAAAAGCTGTAACCGTACGATGAATGAACTCTGTGACTAGTATAGAACTCTCGTCTGTGGAACTTTTTCCGAATTATTTTTGTAAAGATTTAAGGAATTACTTATCGCACGTCGAACACAACGCGACGGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGTCCGAATGGGCGTGGGTTCAAATCCCACAGCTGTCAATTCTATTT]

[+] EMBL AK073974             [CCAGCAGCGCCCTGCAGCTGCAAGCCTGCAACTAGTCGCTGGCCGGCCGGCCGGCCATGTACTACTGCCTCGCCGCGCCGCCGGCCGCTGCGGCACCGGCAGCGCCAGCGGCGAGGCGCGCGTCCTCTTTCCTCTTCGTGGTGTCGGTCCCTCCTCCGACTTTATGGGGGAGGGTGACGGGAGGCGCCGTGTCCGCCCAGCGGCTGGTGCGGCGGCGGTGCTCCTCCGCCGGCGAGCCCAGGGCGGCCGGCGACGGTGGCCTATCCAGTTTTTGCATAATTGAAGGCCCAGAGACTATACAAGACTTTGTTCAAATGCAATCACAAGAGATTCAAGACAACATCAGGAGCCGCCGTAACAAAATTTTCCTTTTGATGGAAGAGGTTAGACGATTGCGGGTGCAGCAGCGAATCAGAACTTCTGAAAGCAGAGGTGCAAGCAGTGAAGAAAGTGAAATGCCTGAAATCCAGTCTAGTATTCCCTTTTTGCCTAATACGTCACCGAAGACAATGAAACAACTCTATTTGACATCATTCTCATTCATAACTGGGATAATCTTTTTTGGAGGCTTGATAGCCCCAGTACTTGAGCTGAAATTAGGGCTAGGTGGTACATCTTATGAAGATTTTATAAGGACCATGCACTTGCCTCTTCAATTAAGTCAGGTAGATCCCATTGTGGCATCCTTTTCAGGTGGTGCAGTTGGTGTAATCTCGGCATTAATGTTGGTTGAAATTAGAAACGTCAGGCAGCAAGAGAAGAAAAGGTGTACATATTGCCATGGGACTGGATACTTGCCATGCGCTCGCTGTTCTGCAAGTGGAATGCTATTGAACAGCAAGAGTTTTTCACTTTCATGTGACAACGGCCATAATATGTGGTCTACAACCGAAAGGTGCCCCAATTGTTCAGGAGCTGGAAAGGTGATGTGCCCAACTTGCTTGTGCACAGGAACGGCAATGGCAAGCGAGCATGACCCACGGATAGACCCCTTCGATTAGTGATGAGCAATTGGAATCTGGAAGTGTGTATTCTAGCTGTACTGTTGGCTGCCCCCCCTTTTTGTTTGTGTTGCTGTGATAGGCCTGAATACCTGAAGAATGAAGTTCAGATCACACAACGAAAGCCAAAAGCTGTAACCGTACGATGAATGAACTCTGTGACTAGTATAGAACTCTCGTCTGTGGAACTTTTTCCGAATTATTTTTGTAAAGATTTAAGGAATTACTTATCGCACGTCGAACACAACGCGACGGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGTCCGAATGGGCGTGGGTTCAAATCCCACAGCTGTCAATTCTATTT]
[+] EMBL CB659242             [  AGCATCGCCCTGCAGCTGCAAGCCTGCAACTAGTCGCTGGCCGGCCGGCCGGCCATGTACTACTGCCTCGCCGCGCCGCCGGCCGCTGCGGCACCGGCAGCGCCAGCGGCGAGGCGCGCGTCCTCTTTCCTCTTCGTGGTGTCGGTCCCTCCTCCGACTTTATGGGGGAGGGTGACGGGAGGCGCCGTGTCCGCCCAGCGGCTGGTGCGGCGGCGGTGCTCCTCCGCCGGCGAGCCCAGGGCGGCCGGCGACGGTGGCCTATCCAGTTTTTGCATAATTGAAGGCCCAGAGACTATACAAGACTTTGTTCAAATGCAATCACAAGAGATTCAAGACAACATCAGGAGCCGCCGTAACAAAATTTTCCTTTTGATGGAAGAGGTTAGACGATTGCGGGTGCAGCAGCGAATCAGAACTTCTGAAAGCAGAGGTGCAAGCAGTGAAGAAAGTGAAATGCCTGAAATCCCGTCTAGTATTCCCTTTTTGCCTAATACGTCACCGAAGACAATGAAACAACTCTATTTGACATCATTCTCATTCATAACTGGGATAATCTTTTTTGGAGGCTTGATAGCCCCAGTACTTGAGCTGAAATTAGGGCTAGGTGGTACATCTTATGAAGATTTTATAAGGACCATGCACTTGCCTCTTCAATTAAGTCAGGTAGATCCCATTGTGGCATCCTTTTCAGGTGGTGCAGTTGGTGTAATCTCGGCATTAATGTTGGTTGAAATTAGAAACGTCAGGCAGCAAGAGAAGAAAAGGTGTACATATTGCCATGGGACTGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK067439             [                                         GCCGGCCGGCCGGCCATGTACTACTGCCTCGCCGCGCCGCCGGCCGCTGCGGCACCGGCAGCGCCAGCGGCGAGGCGCGCGTCCTCTTTCCTCTTCGTGGTGTCGGTCCCTCCTCCGACTTTATGGGGGAGGGTGACGGGAGGCGCCGTGTCCGCCCAGCGGCTGGTGCGGCGGCGGTGCTCCTCCGCCGGCGAGCCCAGGGCGGCCGGCGACGGTGGCCTATCCAGTTTTTGCATAATTGAAGGCCCAGAGACTATACAAGACTTTGTTCAAATGCAATCACAAGAGATTCAAGACAACATCAGGAGCCGCCGTAACAAAATTTTCCTTTTGATGGAAGAGGTTAGACGATTGCGGGTGCAGCAGCGAATCAGAACTTCTGAAAGCAGAGGTGCAAGCAGTGAAGAAAGTGAAATGCCTGAAATCCCGTCTAGTATTCCCTTTTTGCCTAATACGTCACCGAAGACAATGAAACAACTCTATTTGACATCATTCTCATTCATAACTGGGATAATCTTTTTTGGAGGCTTGATAGCCCCAGTACTTGAGCTGAAATTAGGGCTAGGTGGTACATCTTATGAAGATTTTATAAGGACCATGCACTTGCCTCTTCAATTAAGTCAGGTAGATCCCATTGTGGCATCCTTTTCAGGTGGTGCAGTTGGTGTAATCTCGGCATTAATGTTGGTTGAAATTAGAAACGTCAGGCAGCAAGAGAAGAAAAGGTGTACATATTGCCATGGGACTGGATACTTGCCATGCGCTCGCTGTTCTGCAAGTGGAATGCTATTGAACAGCAAGAGTTTTTCACTTTCATGTGACAACGGCCATAATATGTGGTCTACAACCGAAAGGTGCCCCAATTGTTCAGGAGCTGGAAAGGTGATGTGCCCAACTTGCTTGTGCACAGGAACGGCAATGGCAAGCGAGCATGACCCACGGATAGACCCCTTCGATTAGTGATGAGCAATTGGAATCTGGAAGTGTGTATTCTAGCTGTACTGTTGGCTGCCCCCCCTTTTTGTTTGTGTTGCTGTGATAGGCCTGAATACCTGAAGAATGAAGTTCAGATCACACAACGAAAGCCAAAAGCTGTAACCGTACGATGAATGAACTCTGTGACTAGTATAGAACTCTCGTCTGTGGA                                                                                                                                                        ]
[-] EMBL CB659243             [                                                                                                                                                                                                                                                                                                                                                                                             AGGTTAGACGA TGCGGGTGCAGCAGCGAATCAG ACTTCTGAAAGCAGAGGTGCAAGCAGTGAAGAAAGTGAAATGCCTGAAATCCCGTCTAGTATTCCCTTTTTGCCTAATACGTCACCGAAGACAATGAAACAACTCTATTTGACATCATTCTCATTCATAACTGGGATAATCTTTTTTGGAGGCTTGATAGCCCCAGTACTTGAGCTGAAATTAGGGCTAGGTGGTACATCTTATGAAGATTTTATAAGGACCATGCACTTGCCTCTTCAATTAAGTCAGGTAGATCCCATTGTGGCATCCTTTTCAGGTGGTGCAGTTGGTGTAATCTCGGCATTAATGTTGGTTGAAATTAGAAACGTCAGGCAGCAAGAGAAGAAAAGGTGTACATATTGCCATGGGACTGGATACTTGCCATGCGCTCGCTGTTCTGCAAGTGGAATGCTATTGAACAGCAAGAGTTTTTCACTTTCATGTGACAACGGCCATAATATGTGGTCTACAACCGAAAGGTGCCCCAATTGTTCAGGAGCTGGAAAGGTGATGTGCCCAACTTGCTTGTGCACAGGAACGGCAATGGCAAGCGAGCATGACCCACGGATAGACCCCTTCGATTAGTGATGAGCAATTGGAATCTGGAAGTGTGTATTCTAGCTGTACTGTTGGCTGCCCCCCCTTTTTGTTTGTGTTGCTGTGATAGGCCTGAATACCTGAAGAATGAAGTTCAGATCACACAACGAAAGCCAAAAGCTGTAACCGTACGATGAATGAACTCTGTGACTAGTATAGAACTCTCGTCTGTGGAACTTTTTCCGAATTATTTTTGTAAAGATTTAAGGAATTACT                                                                                                               ]
[+] EMBL CB238429             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTGAAATTAGAAACGTCAGGCAGCAAGAGAAGAAAAGGTGTACATATCGCCATGGGACTGGATACTTGCCATGCGCTCGCTGTTCTGCAAGTGGAATGCTATTGAACAGCAAGAGTTTTTCACTTTCATGTGACAACGGCCATAATATGTGGTCTACAACCGAAAGGTGCCCCAATTGTTCAGGAGCTGGAAAGGTGATGTGCCCAACTTGCTTGTGCACAGGAACGGCAATGGCAAGCGAGCATGACCCACGGA                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_7872#0 CCAGCAGCGCCCTGCAGCTGCAAGCCTGCAACTAGTCGCTGGCCGGCCGGCCGGCCATGT ACTACTGCCTCGCCGCGCCGCCGGCCGCTGCGGCACCGGCAGCGCCAGCGGCGAGGCGCG CGTCCTCTTTCCTCTTCGTGGTGTCGGTCCCTCCTCCGACTTTATGGGGGAGGGTGACGG GAGGCGCCGTGTCCGCCCAGCGGCTGGTGCGGCGGCGGTGCTCCTCCGCCGGCGAGCCCA GGGCGGCCGGCGACGGTGGCCTATCCAGTTTTTGCATAATTGAAGGCCCAGAGACTATAC AAGACTTTGTTCAAATGCAATCACAAGAGATTCAAGACAACATCAGGAGCCGCCGTAACA AAATTTTCCTTTTGATGGAAGAGGTTAGACGATTGCGGGTGCAGCAGCGAATCAGAACTT CTGAAAGCAGAGGTGCAAGCAGTGAAGAAAGTGAAATGCCTGAAATCCCGTCTAGTATTC CCTTTTTGCCTAATACGTCACCGAAGACAATGAAACAACTCTATTTGACATCATTCTCAT TCATAACTGGGATAATCTTTTTTGGAGGCTTGATAGCCCCAGTACTTGAGCTGAAATTAG GGCTAGGTGGTACATCTTATGAAGATTTTATAAGGACCATGCACTTGCCTCTTCAATTAA GTCAGGTAGATCCCATTGTGGCATCCTTTTCAGGTGGTGCAGTTGGTGTAATCTCGGCAT TAATGTTGGTTGAAATTAGAAACGTCAGGCAGCAAGAGAAGAAAAGGTGTACATATTGCC ATGGGACTGGATACTTGCCATGCGCTCGCTGTTCTGCAAGTGGAATGCTATTGAACAGCA AGAGTTTTTCACTTTCATGTGACAACGGCCATAATATGTGGTCTACAACCGAAAGGTGCC CCAATTGTTCAGGAGCTGGAAAGGTGATGTGCCCAACTTGCTTGTGCACAGGAACGGCAA TGGCAAGCGAGCATGACCCACGGATAGACCCCTTCGATTAGTGATGAGCAATTGGAATCT GGAAGTGTGTATTCTAGCTGTACTGTTGGCTGCCCCCCCTTTTTGTTTGTGTTGCTGTGA TAGGCCTGAATACCTGAAGAATGAAGTTCAGATCACACAACGAAAGCCAAAAGCTGTAAC CGTACGATGAATGAACTCTGTGACTAGTATAGAACTCTCGTCTGTGGAACTTTTTCCGAA TTATTTTTGTAAAGATTTAAGGAATTACTTATCGCACGTCGAACACAACGCGACGGTTTG GCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGTCCGAATGGGCGTGGGTTCAAATCC CACAGCTGTCAATTCTATTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)